tRNA Gene Summary

Overview
High confidence set 459
tRNAs decoding standard 20 AA 458
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 9
Unexpected anticodons 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 159
Secondary filter (low feature scores, possible rep. element) 56

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 33)
Leu CAA
1
Ile AAT
1
Ile TAT
23
Tyr GTA
8
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
5
GGC
 
CGC
4
TGC
7
16
GlyACC
 
GCC
14
CCC
3
TCC
9
26
ProAGG
4
GGG
 
CGG
2
TGG
14
20
ThrAGT
8
GGT
 
CGT
27
TGT
9
44
ValAAC
26
GAC
 
CAC
14
TAC
16
56
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
 
CGA
14
TGA
14
ACT
 
GCT
10
 
 
 
 
47
ArgACG
15
GCG
 
CCG
1
TCG
3
 
 
 
 
CCT
15
TCT
4
38
LeuAAG
11
GAG
 
CAG
1
TAG
2
 
 
 
 
CAA
1
TAA
12
27
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
5
 
 
 
 
5
AsnATT
 
GTT
8
 
 
 
 
8
Lys 
 
 
 
CTT
19
TTT
8
27
AspATC
 
GTC
7
 
 
 
 
7
Glu 
 
 
 
CTC
11
TTC
18
29
HisATG
 
GTG
6
 
 
 
 
6
Gln 
 
 
 
CTG
11
TTG
27
38
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
7
GAT
 
CAT
 
TAT
23
30
iMet/Met 
 
 
 
CAT
9/5
 
 
14
TyrATA
 
GTA
8
 
 
 
 
8
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
8
 
 
 
 
8
Trp 
 
 
 
CCA
4
 
 
4
SelCys 
 
 
 
 
 
TCA
1
1