tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 192
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 9
Total tRNAs 201
Intron Summary (tRNAs with introns: 150)
Ala AGC
9
Ala CGC
3
Ala TGC
2
Gly GCC
13
Gly CCC
1
Gly TCC
2
Pro AGG
5
Pro CGG
3
Pro TGG
2
Thr CGT
1
Thr TGT
1
Val AAC
7
Val CAC
3
Val TAC
1
Ser CGA
3
Ser TGA
1
Arg TCG
1
Arg CCT
2
Leu AAG
10
Leu CAG
4
Leu TAG
1
Leu CAA
1
Phe GAA
6
Asn GTT
6
Lys CTT
10
Lys TTT
2
Asp GTC
9
Glu CTC
10
Glu TTC
2
His GTG
4
Gln CTG
7
Gln TTG
1
Ile TAT
1
Met CAT
4
Tyr GTA
4
Cys GCA
5
Trp CCA
3
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 8539

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
9
GGC
 
CGC
3
TGC
2
14
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
14
CCC
1
TCC
2
17
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
5
GGG
 
CGG
3
TGG
2
10
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
7
GGT
 
CGT
2
TGT
1
10
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
7
GAC
 
CAC
3
TAC
2
12
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
5
GGA
 
CGA
4
TGA
1
ACT
 
GCT
2
 
 
 
 
12
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
9
GCG
 
CCG
1
TCG
1
 
 
 
 
CCT
2
TCT
3
16
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
10
GAG
 
CAG
4
TAG
2
 
 
 
 
CAA
1
TAA
 
17
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
7
 
 
 
 
7
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
7
 
 
 
 
7
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
10
TTT
2
12
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
9
 
 
 
 
9
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
10
TTC
2
12
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
6
 
 
 
 
6
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
7
TTG
1
8
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
9
GAT
 
 
 
TAT
1
10
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
3/6
 
 
9
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
4
 
 
 
 
4
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
5
 
 
 
 
5
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
3
 
 
3
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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