Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>...........<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGCTGTGGTTTAGT.GGTA.TAATGTTCCCTTAGCA..................................TGGGAGAG...........GtCCTGGGTTCGATTCCCAGCAGCTCCA tRNA-Ala-AGC-2-1 Sc: 74.9 GGGGCTGTGGTTTAGT.GGTA.TAATGTTCCCTTAGCA..................................TGGGAGAG...........GtCCTGGGTTCGATTCCCAGCAGCTCCA tRNA-Ala-AGC-2-2 Sc: 74.9 GGGGTCATGGTTTAGT.GGTA.TAACATTCCCTTAGCA..................................TGGGAGAG...........GtCCGGGGTTCGATTCCCCGTGACTCCA tRNA-Ala-AGC-3-1 Sc: 74.8 GGGCTGTTGGTTTAGT.GGTA.TAATACCCGCTTAGCAtggcttcacgagttccactctaagggcacgagcaTGCGGGTG...........GtCCGGAGTTCGATTCTCCGACAGTCCA tRNA-Ala-AGC-1-1 Sc: 63.9 >>>>>>>..>>>...........<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGCTTGGTTTAGT.GGTA.TAACATATCTTTCGCA..................................TAGATAGG...........GtCGCCGGTTCGATTCCGGCAGCGTCCA tRNA-Ala-CGC-2-1 Sc: 69.3 GGGCGTTTGGTTTAGT.GGTA.TAACATATCTTTCGCA..................................TAGATAGG...........GtCGCCGGTTCGATTCCGGCAACGTCCA tRNA-Ala-CGC-1-1 Sc: 68.6 >>>>>>>..>>>...........<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGATTGGTTTAGT.GGTA.TAACGTCTGTTTTGCAttatcgtgaa........................TACAGAAG...........GtCGGGATTTCGATTATCCCATCGTCCA tRNA-Ala-TGC-3-1 Sc: 57.8 GGGCAATTAGTTTAGT.GGTA.TAACATCCGTTTTGCAttgatggtaa........................TACGGAAG...........GtCGTGATTTCGATTATCACATTGTCCA tRNA-Ala-TGC-2-1 Sc: 56.7 >>>>>>>..>>>>.........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGTTATAGTTTAATTGGTA.AAACTAGGACTTTGCA..................................CGTCTTGA...........A.CTCAGGTTCGATTCCTGATAACTCCA mt-tRNA-Ala-TGC-1-1 Sc: 47.4
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...............................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTTGTGGCGTAATTGGC.A.ACGCGTCTGACTACGA........................................................ATCAGGAG...........AcTGCAGGTTCGAGCCCTGCCAAGGTCA tRNA-Arg-ACG-2-1 Sc: 73.4 GGCCTTGTGGCGTAATTGGC.A.ACGCGTCTGACTACGA........................................................ATCAGGAG...........AcTGCAGGTTCGAGCCCTGCCAAGGTCA tRNA-Arg-ACG-2-2 Sc: 73.4 GGCCTTGTGGCGTAATTGGC.A.ACGCGTCTGACTACGA........................................................ATCAGGAG...........AcTGCAGGTTCGAGCCCTGCCAAGGTCA tRNA-Arg-ACG-4-1 Sc: 73.4 >>>>>>>..>>>............<<<.>>>>>...............................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGACTTGTGGCCCAAT.GGC.A.AGGCGTCTGACTACGA........................................................ATCAGAAG...........AtTGCAGGTTCGATCCCTGCCAAGTTCA tRNA-Arg-ACG-3-1 Sc: 73.3 >>>>>>>..>>>>..........<<<<..>>>>...............................................................<<<<.................>>>>>.......<<<<<<<<<<<<. AACATGTTAGTTTAAG.GGTtA.GAATATCGTGCTACGG........................................................ACACGTTG...........A.TATAAGTTCGAATCTTATACATGTTT mt-tRNA-Arg-ACG-1-1 Sc: 38.2 AACATGTTAGTTTAAG.GGTtA.GAATATCGTGCTACGG........................................................ACACGTTG...........A.TATAAGTTCGAATCTTATACATGTTT mt-tRNA-Arg-ACG-1-2 Sc: 38.2 AACATGTTAGTTTAAG.GGTtA.GAATATCGTGCTACGG........................................................ACACGTTG...........A.TATAAGTTCGAATCTTATACATGTTT mt-tRNA-Arg-ACG-1-3 Sc: 38.2 >>>>>>>..>>>>..........<<<<.>.>>>...............................................................<<<.<................>>>>>.......<<<<<<<<<<<<. GGGCTGGTGGCGCAGC.GGTtA.GCGCGTCGGATTGCGTaagtggcgaattaagacagatgcatctcagcagcaagctaaccctttcatatagagATCCCAAG...........GtCCCCGGTTCAAATCCGGGTCAGCCCT tRNA-Arg-GCG-1-1 Sc: 56.9 >>>>>>>..>>>>..........<<<<.>>>>>...............................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCGGCTGGCCTAAT.GGT.A.AGGCGTCTCTTTCCGGtgagctgatgctggaact......................................TGGAGAAG...........AtTGCAGGTTCGAATCCTGCGTCGGTCG tRNA-Arg-CCG-1-1 Sc: 56.0 GGCCGGCTGGCCTAAT.GGT.A.AGGCGTCTCTTTCCGGctatccactccggaacc.......................................TGGAGAAG...........AtTGCAGGTTCGAATCCTGCGTCGGTCG tRNA-Arg-CCG-1-2 Sc: 56.0 >>>>>>>..>>>>..........<<<<.>>>>>...............................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCTCGTGGCCCAAT.GGT.A.GGGCGTCGGTTTTCGG........................................................CACCGAAG...........AtTGCGCGTTCGAGTCGCGTCGAGATCG tRNA-Arg-TCG-1-1 Sc: 65.5 GGCCGCGTGGCCTAAT.GGTtA.AGGCGCTGGTTTTCGGttactgaacc..............................................CACCAGCG...........AtTCTGCGTTCGAATCGCAGCGTGGTCG tRNA-Arg-TCG-2-1 Sc: 55.2 >>>>>>>..>>>............<<<.>>>>>...............................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GAGGGGCTGGCAGAAG.GGT.A.ATGCGTAGCTCTCCTAtttgattggctgtccagtcactaggctagctc........................AAGCTAAG...........AtTGTGGGTTCGAGTCCCACGTCCCTCG tRNA-Arg-CCT-1-1 Sc: 52.5 >>>>>>>..>>>>..........<<<<.>>>>>...............................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCAGTAGCCCAAT.GGT.A.GGGCGTCAGACTTCTA........................................................ATCTGAAG...........GtTGGCGGTTCGAGCCCGCCCTGGGGTG tRNA-Arg-TCT-3-1 Sc: 81.8 GCTTCCGTGGCGCAAT.GGT.A.GCGCGTCAGACTTCTAtatcaggca...............................................ATCTGAAG...........GtTGCGGGTTCGAGTCCCGCCGGAAGTG tRNA-Arg-TCT-2-1 Sc: 77.6 >>>>>>>..>>>>..........<<<<.>>>>>...............................................................<<<<<................>>>.>.......<.<<<<<<<<<<. TTCTTATTAGCTCAAG.GGT.A.GAGCAGAATACTTCTA........................................................ATATTTTG...........A.TCCTAGTTCGAATCCAGGATAAGAAA mt-tRNA-Arg-TCT-1-1 Sc: 52.8 TTCTTATTAGCTCAAG.GGT.A.GAGCAGAATACTTCTA........................................................ATATTTTG...........A.TCCTAGTTCGAATCCAGGATAAGAAA mt-tRNA-Arg-TCT-1-2 Sc: 52.8 TTCTTATTAGCTCAAG.GGT.A.GAGCAGAATACTTCTA........................................................ATATTTTG...........A.TCCTAGTTCGAATCCAGGATAAGAAA mt-tRNA-Arg-TCT-1-3 Sc: 52.8
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>........<<<<<<<<<<<<. GTCTCCGTGGCGCAATCGGCtA.GCGCGTCTGACTGTTAATCAGGAG...........GtTGGAAGTT.CGAGCCTTCCCGGGGACG tRNA-Asn-GTT-7-1 Sc: 73.6 GTCTCCGTGGCGCAATCGGCtA.GCGCGTCTGACTGTTAATCAGGAG...........GtTGGAAGTT.CGAGCCTTCCCGGGGACG tRNA-Asn-GTT-7-2 Sc: 73.6 GTCTCCGTGGCGCAATCGGCtA.GCGCGTCTGACTGTTAATCAGGAG...........GtTGGAAGTT.CGAGCCTTCCCGGGGACG tRNA-Asn-GTT-7-3 Sc: 73.6 GTCTCCGTGGCGCAATCGGCtA.GCGCGTCTGACTGTTAATCAGGAG...........GtTGGAAGTT.CGAGCCTTCCCGGGGACG tRNA-Asn-GTT-7-4 Sc: 73.6 GCTCTCATAGCTCAAG.GGT.A.GAGCAAAATACTGTTAATATTTGT...........A.TAGATGTT.CGAGTCATCTTGAGAGCT mt-tRNA-Asn-GTT-1-1 Sc: 48.5 GCTCTCATAGCTCAAG.GGT.A.GAGCAAAATACTGTTAATATTTGT...........A.TAGATGTT.CGAGTCATCTTGAGAGCT mt-tRNA-Asn-GTT-3-1 Sc: 48.5 GCTCTCATAGCTCAAG.GGT.A.GAGCAAAATACTGTTAATATTTGT...........A.TAGATGTT.CGAGTCATCTTGAGAGCT mt-tRNA-Asn-GTT-5-1 Sc: 48.5 GCTCTTATAGCTCAAG.GGT.A.GAGCAAAATACTGTTAATATTTGT...........A.TAGATGTT.CGAGTCATCTTAAGAGCT mt-tRNA-Asn-GTT-4-1 Sc: 47.8 GCTCTTATAGCTCAAG.GGT.A.GAGCAAAATACTGTTAATATTTGT...........A.TAGATGTT.CGAGTCATCTTAAGAGCT mt-tRNA-Asn-GTT-6-1 Sc: 47.8 GCTCTTATAGCTCAAG.GGT.A.GAGCAAAATACTGTTAATATTTGT...........A.TAGATGTTcCGAGTCATCTTAAGAGCT mt-tRNA-Asn-GTT-2-1 Sc: 41.0
Asp tRNAs
>>>>>>>..>>>...........<<<.>>>>>..........................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCTCGATGGTCTAACGGTtA.TGATTTCCGCTTGTCAttgttaaacattaacaag.CGCGGGAG...........ACCAGGGTTCGACTCCCTGTCGGGGAG tRNA-Asp-GTC-4-2 Sc: 55.6 TCCTCGATGGTCTAACGGTtA.TGATTTCCGCTTGTCAtttgttaacaattaacaagCGCGGGAG...........ACCAGGGTTCGACTCCCTGTCGGGGAG tRNA-Asp-GTC-4-1 Sc: 55.5 TCCGGAATGGTCTAACGGTcA.TGATTTCCGCTTGTCActttgtataacaag.....CGCGGGAG...........ACCAGGGTTCGACTCCCTGTTCCGGAG tRNA-Asp-GTC-2-1 Sc: 55.2 TCCGTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAattgtttgataacaag...CGCGGGAG...........ACCGGGGTTCGACTCCCCGTCGCGGAG tRNA-Asp-GTC-1-1 Sc: 54.6 TCCGTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAttgttcgataacaag....CGCGGGAG...........ACCGGGGTTCGACTCCCCGTCGCGGAG tRNA-Asp-GTC-3-1 Sc: 54.6
Cys tRNAs
>>>>>>>..>>>>.........<<<<.>.>>>.......<<<.<................>>>>>.......<<<<<<<<<<<<. GGGCTGGTGGCGCAGCGGTtA.GCGCGTAGGATTGCAGATCCCAAG...........GtCCCCGGTTCAAATCCGGGTCAGCCCT tRNA-Cys-GCA-1-1 Sc: 72.5
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGTTCTATGGTGTAGCGGTtA.GCATAGCGGATTCTGAtttatcattagagtcTTCCGTTG...........A.CCCCGGTTCGATTCCGGG.TAGGACCT tRNA-Gln-CTG-1-1 Sc: 60.5 GGTTCTATGGTGTAGCGGTtA.GCATAGCGGATTCTGAttgatttcggagtc.TTCCGTTG...........A.CCCCGGTTCGATTCCGGG.TAGGACCT tRNA-Gln-CTG-1-2 Sc: 60.5 >>>>>>>..>>>...........<<<.>>>>>......................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGTCCTATGGTCTAGTGGTtA.TGACTCCGGATTTTGAtatactcaagaa...TTCCGGC............AtCCTGGGTTCGAATCCCAG.TAGGACCT tRNA-Gln-TTG-2-1 Sc: 65.9 GGTTTCGTGGTCTAGGGGTtA.TGACACCGGATTTTGActtccaacaccaaacTTCCGGTT...........G.CCTGGGTTCGAATCCCAG.CGAGACCT tRNA-Gln-TTG-1-1 Sc: 64.0
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>..............<<<<<................>>>>>.......<<<<<<<<<<<<. TCCGATATGGTGTAGA..GGT.A.ACATCGCTGTCTCTCAagaaggtCACAGCAG...........C.CCCGGGTTCGATTCCCGGTGTCGGAA tRNA-Glu-CTC-1-1 Sc: 51.3 TCCGATATGGTGTAGA..GGT.A.ACATCGCTGTCTCTCAagaaggtCACAGCAG...........C.CCCGGGTTCGATTCCCGGTGTCGGAA tRNA-Glu-CTC-1-2 Sc: 51.3 TCCGATATGGTGTAGA..GGT.A.ACATCGCTGTCTCTCAagtaggtCACAGCAG...........C.CCCGGGTTCGATTCCCGGTGTCGGAA tRNA-Glu-CTC-1-3 Sc: 51.3 TCCGATATGGTGTAGA..GGT.A.ACATCGCTGTCTCTCAagcaggtCACAGCAG...........C.CCCGGGTTCGATTCCCGGTGTCGGAA tRNA-Glu-CTC-1-4 Sc: 51.3 >>>>>>>..>>>>...........<<<<.>>>>>..............<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCTAGTGGTGTAGT..GGCtA.ACATCGCTGTCTTTCA.......CACAGCAG...........C.CCTGGGTTCGATTCCCAGCTAGGGAG tRNA-Glu-TTC-3-1 Sc: 60.3 TCCCTAGTGGTGTAGT..GGCtA.ACATCGCTGTCTTTCA.......CACAGCAG...........C.CCTGGGTTCGATTCCCAGCTAGGGAG tRNA-Glu-TTC-3-2 Sc: 60.3 TCCCTAGTGGTGTAGT..GGCtA.ACATCGCTGTCTTTCA.......CACAGCAG...........C.CCTGGGTTCGATTCCCAGCTAGGGAG tRNA-Glu-TTC-3-3 Sc: 60.3 TCCCTAGTGGTGTAGT..GGCtA.ACATCGCCGTCTTTCA.......CACGGCAG...........C.CCTGGGTTCGATTCCCAGCTAGGGAG tRNA-Glu-TTC-2-1 Sc: 59.9 >>>>>>>..>>>.............<<<.>>>>>..............<<<<<................>>>>>.......<<<<<<<<<<<<. GACCCAATGGTCAAGTTaGGTtA.AGACATAATATTTTCG.......ATATTACA...........TtCGAGAGTTCAAATCTCTCTTGGGTTG mt-tRNA-Glu-TTC-1-1 Sc: 43.4
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCATTGGTGGTTTAGTGGT.A.AAATCCGTCGTTGCCATCGACGGG...........CCCCGGGTTCGATTCCCGGCCGATGCA tRNA-Gly-GCC-1-1 Sc: 64.0 GCATTGGTGGTTTAGTGGT.A.AAATCCGTCGTTGCCATCGACGGG...........CCCCGGGTTCGATTCCCGGCCGATGCA tRNA-Gly-GCC-1-2 Sc: 64.0 GCATTGGTGGTTTAGTGGT.A.AAATCCGTCGTTGCCATCGACGGG...........CCCCGGGTTCGATTCCCGGCCGATGCA tRNA-Gly-GCC-1-3 Sc: 64.0 GCATTGGTGGTTTAGTGGT.A.AAATCCGTCGTTGCCATCGACGGG...........CCCCGGGTTCGATTCCCGGCCGATGCA tRNA-Gly-GCC-1-4 Sc: 64.0 GCATTGGTGGTTTAGTGGT.A.AAATCCGTCGTTGCCATCGACGGG...........CCCCGGGTTCGATTCCCGGCCGATGCA tRNA-Gly-GCC-1-5 Sc: 64.0 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGCTGGTAGTCAATGGGTtA.AGATCCAGCATTCCCAATGCTGGG...........GACCGGGTTCGAGTCCCGGCCGGCGCA tRNA-Gly-CCC-1-1 Sc: 47.0 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCATCAATGGTCTAGTGGT.A.TGACGCTTGCCTTCCAAGCAAGCT...........GCCCGCGTTCGATTCGCGGTTGATGCA tRNA-Gly-TCC-2-1 Sc: 73.3 GCATCAATGGTCTAGTGGT.A.TGACGCTTGCCTTCCAAGCAAGCT...........GCCCGCGTTCGATTCGCGGTTGATGCA tRNA-Gly-TCC-2-2 Sc: 73.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCACCAATGGTCAAGTGGT.A.TGACGCTTGCCTTCCAAGCAAGCT...........GCCCGCGTTCGATTCGCGGTTGGTGCA tRNA-Gly-TCC-1-1 Sc: 67.6
His tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GGGGTCATGGTCTAGT.GGTtA.GGACATGACGTTGTGGCCGTCATA...........ACCCGCGTTCGATTCGCGGTGATCCCA tRNA-His-GTG-2-1 Sc: 61.6 >>>>>>>..>>>............<<<..>>>>.......<<<<................>>>>>.......<<<<<<<<<<<<. GGTGGTATGGTCTAGT.GGT.A.TGACGTCGCGTTGTGGCCGCGCCA...........GCCTGGGTTCGATTCCCAGTACCGCCA tRNA-His-GTG-3-1 Sc: 59.3 >.>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<.<. GTGGGTATAGTTTAATTGGT.A.GAACAGCTGTATGTGGCATAGTAT...........ATCCTTGTTCAATTCAAGGTACCCTCC mt-tRNA-His-GTG-1-1 Sc: 30.2
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>....................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCCCATAGCTCAGTTGGTtA.GAGCGTGGTGCTAATA.............................................ACGCCAAG...........GtCGCGAGTTCGACCCTCGTTGGGACCA tRNA-Ile-AAT-1-1 Sc: 81.0 GGTCCCATAGCTCAGTTGGTtA.GAGCGTGGTGCTAATA.............................................ACGCCAAG...........GtCGCGAGTTCGACCCTCGTTGGGACCA tRNA-Ile-AAT-1-2 Sc: 81.0 GGTCCCATAACTCAGTTGGTtA.GAGTGTGGTGCTAATA.............................................ACGCCAAA...........GtCGAGGGTTCGACCCCCTCTGGGACCA tRNA-Ile-AAT-2-1 Sc: 74.0 GGTCCCATAACTCAGTTGGTtA.GAGTGTGGTGCTAATA.............................................ACGCCAAA...........GtCGAGGGTTCGACCCCCTCTGGGACCA tRNA-Ile-AAT-2-2 Sc: 74.0 >>>>>>>..>>>>..........<<<<.>>>>>....................................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGACCAGTGGCGCAGT.GGTtA.GCGTTGTCCACTTATGtgtctcctgccataagttcacttttcgtggcacgatactcatgccATGGACGG...........GtCCCGGGTTCGAATCCCGGTTGGTCTA tRNA-Ile-TAT-1-1 Sc: 60.3
Leu tRNAs
>>>>.>.....>>......>>>............<<<....>>>>>...................................................<<<<<..>>>>...........<<<<..>>>>>.......<<<<<.<<<<<<<. GGCA.A.....GAT....GGCCGAGCGGTccA.AGGCG...CCAGGTTAAGG............................................TCCTGGTAGGGG.AAA.......CCCTGCGTGAGTTCGAATCTCAC.TCTTGTCA tRNA-Leu-AAG-2-1 Sc: 73.1 GGTA.A.....GAT....GGCCGAGCGGTccA.AGGCG...CCAGGTTAAGG............................................TCCTGGTAGGGG.AAA.......CCCTGCGTGAGTTCGAATCTCAC.TCTTATCA tRNA-Leu-AAG-1-1 Sc: 71.4 GGTA.A.....GAT....GGCCGAGCGGTccA.AGGCG...CCAGGTTAAGG............................................TCCTGGTAGGGG.AAA.......CCCTGCGTGAGTTCGAATCTCAC.TCTTATCA tRNA-Leu-AAG-1-2 Sc: 71.4 GGTA.A.....GAT....GGCCGAGCGGTccA.AGGCG...CCAGGTTAAGG............................................TCCTGGTAGGGG.AAA.......CCCTGCGTGAGTTCGAATCTCAC.TCTTATCA tRNA-Leu-AAG-3-1 Sc: 71.4 >>>>.>.....>>......>>>............<<<....>>>>>...................................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<. GGCA.A.....GAT....GGCCGAGTGGTt.A.AGGCG...CATGGTTCAGGccaacctgaagcaaaagtt.........................TCCATGT.CTCGA.........AAGGGGCGAGGGTTCGAATCCCTC.TCTTGTCA tRNA-Leu-CAG-4-1 Sc: 64.1 >>>>.>......>......>>>............<<<....>>>>>...................................................<<<<<.......................>>>>>.......<<<<<.<.<<<<<. GCCTgG.....CATgggtGGCTCAATGGCa.A.CAGCAccaCCTGGCTCAGActgccctct...................................CCCAGGG....................GCGGGGGTTCAAGTCCCTC.TACAGGCG tRNA-Leu-CAG-3-1 Sc: 28.8 >>.>.>......>......>>>............<<<....>>>>>...................................................<<<<<.......................>>>>>.......<<<<<.<.<<.<<. GCGT.G.....GGT....GGCTCAATGGCa.A.CAGCAccaCCTGGCTCAGGctgccctcc...................................CCCAGGG....................GCGGGGGTTTGAATCCCTC.CACAGGCG tRNA-Leu-CAG-2-1 Sc: 27.4 >>>>.>......>.......>>............<<.....>>>>>...................................................<<<<<........................>>>>.......<<<<..<.<<<<<. GCCT.GgtgcaGAT....GACTCAATGGCa.A.TAGCAtcaTCTGGCTCAGActgctcttc...................................TCCAGAA....................GCAGGGGTTCAAATCCCCC.TGCAGGCA tRNA-Leu-CAG-1-1 Sc: 23.6 >>>>.>.....>>......>>>>..........<<<<....>>>>>...................................................<<<<<..>>...............<<..>>>>>.......<<<<<.<<<<<<<. GGCA.A.....GGT....GGCCGAGTGGTt.A.TGGCG...TTGGTTTTAGGtaatatat....................................CACCAAT.GGGA...........AACCGCGTGGGTTCGAATCCCAC.CCTTGTCA tRNA-Leu-TAG-1-1 Sc: 64.5 >>>>.>.....>>......>>>............<<<....>>>>>...................................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<. GGCA.A.....GAT....GGCCGAGCGGTt.A.AGGCG...TTGCACTCAAGctgccaagcttagccacctcaggtggttagca............TTGCAATGGGG..AAA........CCCGCGGGAGTTCGAATCTCCC.TCTTGTCA tRNA-Leu-CAA-1-1 Sc: 67.0 >>>>.>.....>>......>>>............<<<....>>>>>...................................................<<<<<..>>>>...........<<<<..>>>>>.......<<<<<.<<<<<<<. GGCA.G.....GAT....GACCGAGCGGTt.A.AGGTG...GTAGGTTCAAGttcacgtgatcccatgtggcttcgcctcgtgaagtggcggaaaaTTCTACTGGGGG.CAA.......CCCCGCCAGGGTTCGAATCCCTG.TCCTGTCA tRNA-Leu-CAA-2-1 Sc: 58.5 >>>>.>.....>>......>>>............<<<....>>>>>...................................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<. GGAG.A.....GAT....GGCCGAGTGGTctA.AGGCG...TTCGATTTAAG............................................CTCGAAT.AACGA.........AAGTTGCGTGGGTTCGAACCCCAC.TCTCTCCA tRNA-Leu-TAA-1-1 Sc: 72.7
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>....................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GCCTGGTTAGCTCAATCGGTA.GAGCGTGAGACTCTTA.............................ATCTCAAG.............GcTGCGGGTTCGAGCCCCGC.ATCGGGCT tRNA-Lys-CTT-3-1 Sc: 86.4 GCCTGGTTAGCTCAATCGGTA.GAGCGTGAGACTCTTA.............................ATCTCAAG.............GcTGCGGGTTCGAGCCCCGC.ATCGGGCT tRNA-Lys-CTT-3-2 Sc: 86.4 GCCTGGTTAGCTCAATCGGTA.GAGCGTGAGACTCTTA.............................ATCTCAAG.............GcTGCGGGTTCGAGCCCCGC.ATCGGGCT tRNA-Lys-CTT-3-3 Sc: 86.4 GCCGGGCTAGCTCAATCGGTA.GAGCGTGTGGCTCTTAtgcgtaaggttcataaaaaccgcggattaACCACAAG.............GtTGCGAGTTCGACCCTCGC.GTTCGGCT tRNA-Lys-CTT-2-1 Sc: 71.2 GCCTGGCTAGCTCAATCGGTA.GAGCGTGTGGCTCTTAtgcgaagttcatagaaaccgagaata...ACCACAAG.............GtTGCGAGTTCGACCCTCGC.GTTAGGCT tRNA-Lys-CTT-1-1 Sc: 70.6 >>>>>>>..>>>>.........<<<<.>>>>>....................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GCCCGGGTAGCTCAGTCGGTA.GAGCATGAGGCTTTTA.............................ACCTCAGG.............GtCCAGAGTTCGAGCCTCTG.CTCGGGCG tRNA-Lys-TTT-3-1 Sc: 83.8 GCCCTTGTAGCTCAGTCGGTA.GAGCATGAGGCTTTTA.............................ACCTCAGG.............GtCCAGAGTTCGAGCCTCTG.CAAGGGCG tRNA-Lys-TTT-2-1 Sc: 83.7 GCCCTTGTAGCTCAGTCGGTA.GAGCATGAGGCTTTTAtgtgtaaccgtatgaagcaaa........ACCTCAGG.............GtCCAGAGTTCGAGCCTCTG.CAAGGGCG tRNA-Lys-TTT-4-1 Sc: 76.0 >>>>>>>..>>>>.........<<<<..>>>>....................................<<<<...................>>>>>.......<<<<<.<<<<<<<. AAGACTTTAGTTCAAA.GGTA.GAACGTATGACTTTTA.............................ATCATTA.TT...........G.TATGGGTTCGAATCCCAT.AAGTCTTA mt-tRNA-Lys-TTT-1-1 Sc: 54.0 AAGACTTTAGTTCAAA.GGTA.GAACGTATGACTTTTA.............................ATCATTA.TT...........G.TATGGGTTCGAATCCCAT.AAGTCTTA mt-tRNA-Lys-TTT-1-2 Sc: 54.0
Met tRNAs
>>>>>>>..>>>............<<<.>>>>.............................................<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCTGTGGTCTAGTTGGTcA.TGACGCCGGTCTCATAttcactttatgacgagtggttaactgcttgat....ATCCGGAG...........GtCGCCAGTTCGATCCTGGCCGGGGGCA tRNA-Met-CAT-2-1 Sc: 72.6 >>>>>>>..>>>>..........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGCATGTTGGCGCAGC.GGA.A.GCGCGCCGGGCTCATA....................................ACCCGGAG...........GaCCTTGGATCGAAACCAAGACATGCTA tRNA-iMet-CAT-1-1 Sc: 69.3 AGCATGTTGGCGCAGC.GGA.A.GCGCGCCGGGCTCATA....................................ACCCGGAG...........GaCCTTGGATCGAAACCAAGACATGCTA tRNA-iMet-CAT-1-2 Sc: 69.3 >>>.>>>..>>>............<<<.>>>>.............................................<<<<................>>>>>.......<<<<<<<<.<<<. GCCCCCGTGGTCTAGTTGGTcA.TGACGCCGGTCTCATAtcaacacatatgacgagtagccacaactacttggaaATCCGGAG...........GcCACCAGTTCGAACCTGGTCGGAGGCA tRNA-Met-CAT-1-1 Sc: 69.2
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGGCTTTAGCTCAGTT.GGGAGAGCGTTAGACTGAAGccccaacttcagtttgca...............ATCTAAAG...........GtCGCCTGTTCGATCCAGGCAAGCCGCA tRNA-Phe-GAA-3-1 Sc: 73.1 GCGGCTTTAGCTCAGTT.GGGAGAGCGTTAGACTGAAGattctgcttctgtctgca...............ATCTAAAG...........GtCGCCCGTTCGATCCGGGCAAGCCGCA tRNA-Phe-GAA-4-1 Sc: 72.1 GCGGTTTTAGCTCAGTT.GGGAGAGCGCATGACTGAAGttgaaacttcggtgtttgaataaat........ATCATGAG...........GtCACCCGTTCGATCCGGGTAAACCGCA tRNA-Phe-GAA-5-1 Sc: 66.9 GCGGTTTTAGCTCAGTT.GGGAGAGCGCATGACTGAAGcttcaacttcggtggttgattaatcgactgaatATCATGAG...........GtCACCCGTTCGATCCGGGTAAATCGCA tRNA-Phe-GAA-2-1 Sc: 64.1 GCTCGAATAGCTTAATCaGGTAGAGCAAAATATTGAAG.................................CTATTTGT...........G.TATAAGTTCAAGTCTTATTTCGAGCA mt-tRNA-Phe-GAA-1-1 Sc: 47.1
Pro tRNAs
>>>>>>>..>>>...........<<<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCAGGTGGTTTAGT.GGTA.TAATTCTCGCTTAGGGcaaagttccgattccacaatgatatcgaagctattcaaacccgaagccttccttgggggaaaTGCGAGAG...........GtCCCGGGTTCGACTCCCGGCTTGGGCC tRNA-Pro-AGG-1-1 Sc: 65.9 GGTCTTGTGGTCTAGT.GGTA.TGATTCTCGCTTAGGGtttcaaactcctgagttcacaat.......................................TGCGAGAG...........GcCCCGCGTTCGAATCGCGGCAAGACCC tRNA-Pro-AGG-2-2 Sc: 61.0 GGTCTTGTGGTCTAGT.GGTA.TGATTCTCGCTTAGGGttttcaaactcctgagttcacatt......................................TGCGAGAG...........GcCCCGCGTTCGAATCGCGGCAAGACCC tRNA-Pro-AGG-2-1 Sc: 60.9 >>>>>>>..>>>...........<<<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGGTGGTCTAGTTGGTA.TGATTCTCGCTTCGGGtccacaatttcccgagcttcaacaatgaagttcaagca........................TGCGAGAG...........GtCCCGCGTTCGAATCGCGGCTCGGGCC tRNA-Pro-CGG-1-1 Sc: 63.7 >>>>>>>..>>>...........<<<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTTGTGGTCTAGT.GGTA.TGATTCTCGCTTTGGGttcaacagctcagat...............................................TGCGAGAG...........GcCCCGCGTTCGAATCGCGGCAGGGCCC tRNA-Pro-TGG-1-1 Sc: 60.2 GGTCTCGTGGTCTAGT.GGTA.TGATTCTCGCTTTGGGctcaactcaaagc.................................................TGCGAGAG...........GcCCCGCGTTCGAATCGCGGCGGGACCC tRNA-Pro-TGG-2-1 Sc: 59.3
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>.............................<<<<<.>>>>........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCACTGTGGCGGAGCGGTctA.ACGCGCCAGACTAGAA......................ATCTGGTTCCTTC......GGGAG.CGCTGGTTCGAATCCAGC.CGGTGTCG tRNA-Ser-AGA-1-1 Sc: 72.5 >>>>>>>..>>>>..........<<<<.>>>>>.............................<<<<<.>>>>........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCACTGTGGCGGAGTGGTt.A.TCGCGTCAGCCTAGAAtcgattgaccttcgac......AGCTGATCCCTTC......GGGGG.CCTGAGTTCGAATCTCAG.CGGTGTCG tRNA-Ser-AGA-2-1 Sc: 66.4 GGCACTGTGGCGGAGTGGTt.A.TCGCGTCAGCCTAGAAtcgaatgatcttcgac......AGCTGATCCCTTC......GGGGG.CCTGAGTTCGAATCTCAG.CGGTGTCG tRNA-Ser-AGA-2-2 Sc: 66.4 >>>>>>>..>>>>..........<<<<.>>>>>.............................<<<<<.>>>>........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCACTGTGGCGGAGTGGTt.A.TCGCGTCAGCCTCGAAtcgattcgtc............AGCTGATCCCTTC......GGGGG.CCTGAGTTCGAATCTCAG.CGGTGTCG tRNA-Ser-CGA-1-1 Sc: 66.6 >>>>>>>..>>>............<<<.>>>>>.............................<<<<<.>>>>........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCGCTGTGGCGGAGTGGTt.A.ACGCGTCACACTTGAAgctcctgctttaggat......ATGTGATCCCTTC......GGGGG.CCAAGGTTCGAATCCTTG.CGGCGTCG tRNA-Ser-TGA-1-1 Sc: 69.0 >>>>>>>..>>>>..........<<<<.>>>>>.............................<<<<<.>>>..........<<<...>>>>>.......<<<<<.<<<<<<<. GGCACTATGGCAGAGTGGTt.A.TTGCGTGAGCCTTGAAcctccccagacggtgcaaccccAGCTCATCCC.TTC......GGGGtCAGCGGTTCGAATCCGCT.TGGTGTCG tRNA-Ser-TGA-2-1 Sc: 58.2 >>>>>>>..>>>............<<<.>>>>>.............................<<<<<.>>>>........<<<<...>>>>>.......<<<<<.<<<<<<<. GACACTGTGGCGGAGTGGTt.A.ACGCGGTGCCCTGCTAcctccaatagtt..........AGGCATTGCCTTC......GGGCG.CGCAGGTTCGAATCCTGC.CGGTGTCG tRNA-Ser-GCT-1-1 Sc: 67.5 GACACTGTGGCGGAGTGGTt.A.ACGCGGTGCCCTGCTAcctccttaagtt..........AGGCATTGCCTTC......GGGCG.CGCAGGTTCGAATCCTGC.CGGTGTCG tRNA-Ser-GCT-1-2 Sc: 67.5 GACACTGTGGCGGAGTGGTt.A.ACGCGATGCCCTGCTAcccctttgactcagcaact...AGGCATTGCCTTC......GGGCG.CGCAGGTTCGAATCCTGC.CGGTGTCG tRNA-Ser-GCT-2-1 Sc: 66.9
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<.<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCTATGGCTCAGTTGGTA.G.AGCGCATCACTAGTA.................ATGATGAG...........GtCCTCAGTTCGAATCTGAGTGGGAGCA tRNA-Thr-AGT-1-1 Sc: 83.7 GCTCCTATGGCTCAGTTGGTA.G.AGCGCATCACTAGTA.................ATGATGAG...........GtCCTCAGTTCGAATCTGAGTGGGAGCA tRNA-Thr-AGT-3-1 Sc: 83.7 GCCCATATGGCTTAGTTGGTA.A.AGCGTATCACTAGTA.................ATGATAAG...........AtCCTCAGTTCGACTCTGAGTGTGGGCA tRNA-Thr-AGT-4-1 Sc: 74.7 GCACTCATGGCTCAGTTGGTA.G.AGCGCGTCACTAGTAggacgaatcaatccgtgATGACGAG...........GtCCAGAGTTCGACTCTCTGTGGGTGCA tRNA-Thr-AGT-2-1 Sc: 72.4 >>>>>>>..>>>............<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGCGCGTGGCCAAGC.GGTA.A.GGCGTCGCACTCGTActctcatgac.......ATGCGGAA...........AtCGCCGGTTCGAATCCGGTCGTGCGCA tRNA-Thr-CGT-1-1 Sc: 59.6 >>>>>>>..>>>>.........<.<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGCATAGCTCAGT.GGTA.G.AGCGCTTGACTTGTA.................ATCAAGAG...........GtGGGCGGTTCAATCCCGCCTGTGGGCA tRNA-Thr-TGT-2-1 Sc: 86.5 GCCCTGATAGCTCAGT.GGTA.GtAGCGCTTGACTTGTA.................ATCAAGAG...........GtCCGCGGTTCAATCCCGCGTCGGGGCA tRNA-Thr-TGT-1-1 Sc: 82.1
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGACCTATGGCGCAACGGTA.GCGCGTCAGACTCCAGATCTGACG...........GtTGTGCGTTCAAATCGCACTGGGTTCA tRNA-Trp-CCA-1-1 Sc: 70.4 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<. GGACCCGTGGCGCAATGGTA.GCGCAGCAGACTCCAGATCTGAAG...........GtTGTGCGTTCAATTCGCACCGGGTTCA tRNA-Trp-CCA-2-1 Sc: 68.3
Tyr tRNAs
>>>>>>>..>>>...............<<<.>>>>>........................<<<<<.......................>>>>>.......<<<<<.<<<<<<<. CCCCCGATGGTGT..AGTTGGAt.A.TCACGTTCGGCTGTAAagggaacttctcatgctACCGAAAG..................GtCGCCGGCTCGACTCCGGC.TCGGGGGA tRNA-Tyr-GTA-1-1 Sc: 64.4 CCGCTCGTGGTCT..AGTTGGTt.A.TGGCACCCGGCTGTAAagtgctctttgtt....ACCGGGTT..................GtCGCTGGTTCGACTCCAGC.CGAGCGGA tRNA-Tyr-GTA-3-1 Sc: 63.4 CCGCTGATGGTGT..AGTTGGCt.A.TCACGTTCGGCTGTAAaggacttcccatgct..ACCGAAAG..................GtCGCCGGCTCGATTCCGGC.TCAGCGGA tRNA-Tyr-GTA-2-1 Sc: 63.3 >>>>>>>..>>>...............<<<.>>>>>........................<<<<<..>>>............<<<...>.>>>.......<<<.<.<<<<<<<. AGGAAGATCTCGTtt.GTTGGTttA..CGAGTTGAGCTGTAA.................ACTCAAT.GACTAAT.......TGTCAtCGTAGGTTCGATTCCTTC.TCTTCCTA mt-tRNA-Tyr-GTA-4-1 Sc: 26.8
Val tRNAs
>>>>>>>..>>>............<<<.>>>>>...........................<<<<<................>>>>>.......<<<<...<<<<<....<<<. GGCCGAGTGGTGTAGTTGGTtA.TCACGTTTCGTTAACA....................CCGAAAAG...........GtCCTGAGTTCGAGTCTCA...GCTTG....GTCA tRNA-Val-AAC-1-1 Sc: 76.5 GGCCGAGTGGTGTAGTTGGTtA.TCACGTTTCGTTAACA....................CCGAAAAG...........GtCCTGAGTTCGAGTCTCA...GCTTG....GTCA tRNA-Val-AAC-1-2 Sc: 76.5 GGCCGAGTGGTGTAGTTGGTtA.TCACGTTTCGTTAACA....................CCGAAAAG...........GtCCTGAGTTCGAGTCTCA...GCTTG....GTCA tRNA-Val-AAC-1-3 Sc: 76.5 GGCCGAGTGGTGTAGTTGGTtA.TCACGTTTCGTTAACA....................CCGAAAAG...........GtCCTGAGTTCGAGTCTCA...GCTTG....GTCA tRNA-Val-AAC-1-4 Sc: 76.5 >>>>>>>..>>>>..........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<...<<<<<....<<<. GGTGCCATGGCTGAGT.GGT.A.CAGTCATGGAGTAACA....................CTTTGTAT...........GtCGCGGGTCCAAATCCCGcccCTGGTggctATCA tRNA-Val-AAC-2-1 Sc: 20.4 >>>>>>>..>>>............<<<.>>>>>...........................<<<<<................>>>>>.......<<<<...<<<<<....<<<. GGCTGGATGGTGTAGTTGGTtA.TCACGTATCGTTCACAgctggattaatccactggctCCGATAAG...........GtCCTGGGATCGAACCCCA...GTCTA....GTCA tRNA-Val-CAC-1-1 Sc: 64.8 AGTCGCGTGGTCTAGT.GGCtA.TGATTTCTCGTTCACAtcaagttgaacactgtgtt.CCGAGAAG...........GtCCCAGGTTCGAACCCTG...GTGCG....ACTA tRNA-Val-CAC-2-1 Sc: 56.6 >>>>>>>..>>>............<<<.>>>>>...........................<<<<<................>>>>>.......<<<<...<<<<<....<<<. GATCGACTGGCCCAGT.GGTcA.AGGCGTCCGCTTTACAttcaagtac...........CGCGGAAA...........AtCGCAGGTTCGAACCCTG...CGTCG....ATCA tRNA-Val-TAC-1-1 Sc: 62.8 >>>>>>>..>>>>..........<<<<..>>>>...........................<<<<.................>>>>>.......<<<<...<<<<<....<<<. AAGAAATTAGCTCAGC.GGT.A.GAGCTGTCGTTTTACA....................CACGAAAG...........GtCAGGTGTTCGAATCACC...TATTT....CTTA mt-tRNA-Val-TAC-2-1 Sc: 52.0