tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 116
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 8
Total tRNAs 124
Intron Summary (tRNAs with introns: 57)
Ala AGC
1
Ala TGC
2
Pro AGG
3
Pro CGG
1
Pro TGG
2
Thr AGT
1
Thr CGT
1
Val CAC
1
Val TAC
1
Ser AGA
2
Ser TGA
2
Ser GCT
3
Arg GCG
1
Arg CCG
1
Arg TCG
1
Arg CCT
2
Arg TCT
1
Leu CAG
5
Leu TAG
1
Leu CAA
2
Phe GAA
3
Lys CTT
1
Lys TTT
1
Asp GTC
6
Glu CTC
3
Gln CTG
2
Gln TTG
1
Ile TAT
1
Met CAT
2
Tyr GTA
3
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 16384

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
3
GGC
 
CGC
2
TGC
3
8
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
4
CCC
1
TCC
2
7
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
3
GGG
 
CGG
1
TGG
2
6
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
4
GGT
 
CGT
1
TGT
2
7
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
4
GAC
 
CAC
1
TAC
2
7
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
3
GGA
 
CGA
 
TGA
2
ACT
 
GCT
3
 
 
 
 
8
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
5
GCG
1
CCG
1
TCG
2
 
 
 
 
CCT
2
TCT
3
14
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
4
GAG
 
CAG
5
TAG
1
 
 
 
 
CAA
2
TAA
1
13
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
4
 
 
 
 
4
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
6
 
 
 
 
6
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
4
TTT
4
8
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
6
 
 
 
 
6
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
3
TTC
6
9
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
1
 
 
 
 
1
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
2
TTG
1
3
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
4
GAT
 
 
 
TAT
1
5
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
2/2
 
 
4
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
4
 
 
 
 
4
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
1
 
 
 
 
1
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
2
 
 
2
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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