Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>.>..>>>............<<<.>>>>>......................<<<<<................>>>>>.......<<<<<.....<.<<<<<. GGGCATATGGTGTAGCTGGTtA.TCACATCCGCTTAGCAtggtgttgaa.....TGCGGGGG...........GtCTCCGGTTCGAGTCCGGA.....TTTGTCCA tRNA-Ala-AGC-1-1 Sc: 54.8 GGGCATATGGTGTAGCTGGTtA.TCACATCCGCTTAGCAtggtgttgaa.....TGCGGGGG...........GtCTCCGGTTCGAGTCCGGA.....TTTGTCCA tRNA-Ala-AGC-1-2 Sc: 54.8 GGGCATATGGTGTAGCTGGTtA.TCACATCCGCTTAGCAtggcgctgag.....TGCGGGGG...........GtCTCCGGTTCGAGTCCGGA.....TTTGTCCA tRNA-Ala-AGC-1-3 Sc: 54.8 GGGCATATGGTGTAGCTGGTtA.TCACATCCGCTTAGCAcgttgctgag.....TGCGGGGG...........GtCTCCGGTTCGAGTCCGGA.....TTTGTCCA tRNA-Ala-AGC-1-4 Sc: 54.8 GGGCATATGGTGTAGCTGGTtA.TCACATCCGCTTAGCAcggtgctgag.....TGCGGGGG...........GtCTCCGGTTCGAGTCCGGA.....TTTGTCCA tRNA-Ala-AGC-1-5 Sc: 54.8 >>>>.>>..>>.>..........<.<<.>>>>>......................<<<<<................>>>>>.......<<<<<.....<<.<<<<. GGGCCCTTGGCACAGTTGGT.A.GCGCGTACGCTTCGCAtctcgagaa......TGCGTAAG...........GtCGTGGGTTCGACTCCCAC.....AGTGTCCA tRNA-Ala-CGC-1-1 Sc: 60.3 GGGCCCTTGGCACAGTTGGT.A.GCGCGTACGCTTCGCActaagagaa......TGCGTAAG...........GtCGTGGGTTCAACTCCCAC.....AGTGTCCA tRNA-Ala-CGC-2-1 Sc: 59.2 >>>>>>>..>>.>..........<.<<.>>>>>......................<<<<<................>>>>>.......<<<<<.....<<<<<<<. GGGCGTTTGGCACAGT.GGT.A.GCGCGTATGCTTTGCAttaaaattgcgaactTGCATAAG...........GtCGTGGGCTCGAATCCCAC.....AACGTCCA tRNA-Ala-TGC-1-1 Sc: 62.2 >>>.>....>>.>..........<.<<.>>>>>......................<<<<<................>>>>>.......<<<<<.......<.<<<. GGGCGTTTGGCACAGT.GGT.A.GCGCGTATGCTTTGCAtttaagcaact....TGCATAAG...........GtCGTGGGCTCGAATCCCATtcatc.TCCTCCA tRNA-Ala-TGC-2-1 Sc: 39.0
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCGCCTGGCGAAATGGC.A..TCGCGTCTGACTACGA...............ATCAGGAG...........AtTGCAGGTTCGACCCCTGCGGTGGTCA tRNA-Arg-ACG-1-1 Sc: 62.8 GGCCGCCTGGCGAAATGGC.A..TCGCGTCTGACTACGA...............ATCAGGAG...........AtTGCAGGTTCGACCCCTGCGGTGGTCA tRNA-Arg-ACG-1-3 Sc: 62.8 GGCCGCCTGGCGAAATGGC.A..TCGCGTCTGACTACGA...............ATCAGGAG...........AtTGCAGGTTCGACCCCTGCGGTGGTCA tRNA-Arg-ACG-1-5 Sc: 62.8 GGCCGCCTGGCGAAATGGC.A..TCGCGTCTGACTACGAtagtgtg........ATCAGGAG...........AtTGCAGGTTCGACCCCTGCGGTGGTCA tRNA-Arg-ACG-1-2 Sc: 55.6 GGCCGCCTGGCGAAATGGC.A..TCGCGTCTGACTACGAttgtgtg........ATCAGGAG...........AtTGCAGGTTCGACCCCTGCGGTGGTCA tRNA-Arg-ACG-1-4 Sc: 55.6 >>>>>>>..>>>>..........<<<<.>>>>........................<<<<................>>>>>.......<<<<<<<<<<<<. GGCGCTATGGTGTAGAGGT.At.GCACACGGGACTGCGGttgctttgcgatcacCGCCCGCA...........G.CCCGGGTTCGAATCCTGGTGGCGCCT tRNA-Arg-GCG-1-1 Sc: 41.8 >>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCGGGTTGGCGTAATGGT.A..ACGCGCTAGTTTCCGG...............CGCTAGAG...........AtTCTGGGTTCGAGTCCCAGGCCTGTCG tRNA-Arg-CCG-1-1 Sc: 59.2 >>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTACCTGGCGCAATGGT.A..GCGCGTTTGGCTTCGAttgccgacggc....ACCAAAAG...........GtTGCAGGTTCGAGTCCTGCGGTGGTCA tRNA-Arg-TCG-1-1 Sc: 75.5 GGCTACCTGGCGCAATGGT.A..GCGCGTTTGGCTTCGAttgccgacggc....ACCAAAAG...........GtTGCAGGTTCGAGTCCTGCGGTGGTCA tRNA-Arg-TCG-1-2 Sc: 75.5 >>>>.>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<.<<<<. GCCGCCGTAGCACAATGGC.A..GTGCGTTGCCTTCCTA...............AGGCAAAG...........GtTGTGGGTTCGACCCCCATCGTCGGTA tRNA-Arg-CCT-1-1 Sc: 59.0 >>>>>>>..>>>............<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCTCGTTGTCTAATGGTtA..TGACGTCAGACTTCTAtggagcgg.......ATCTGGAG...........GtTGCGGGTTCGAATCCCGCCGGGGGTT tRNA-Arg-TCT-1-1 Sc: 64.2
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>....................<<<<<................>>>>>.......<<<<<.<<<<<<<. TGCCCCGTGGCTGAGTTGGTtACAGCGTCCGACTGTTAcatcatagcatcaATCGGAAG...........GtCGTGAGTTCGAGCCTCAC.CGGGGCAG tRNA-Asn-GTT-1-1 Sc: 73.6 TGCCCCATGGCTGAGTTGGTtACAGCGTCCGACTGTTAatagaca......ATCGGAAG...........GtCGTGAGTTCGAGCCTCAC.TGGGGCAG tRNA-Asn-GTT-2-1 Sc: 73.5 >........>>>>.........<<<<.>>>>>....................<<<<<................>>>>>.......<<<<<.......<. G.......AGTTGAGTTGGTtACAGCGTCCGACTGTTActatccaataa..ATCGGAAG...........GtCGTGAGTTCGAGCCTCAC.CGGGG.CA tRNA-Asn-GTT-3-1 Sc: 39.6
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTTGGTAGTATATCGGTtA.GTACACCCGCTTGTCA..........CGCGGGAG...........AGCGGGGTTCGACTCCCCGCCAGAGAG tRNA-Asp-GTC-1-1 Sc: 52.2 TCTTTGGTAGTATATCGGTtA.GTACACCCGCTTGTCA..........CGCGGGAG...........AGCGGGGTTCGACTCCCCGCCAGAGAG tRNA-Asp-GTC-1-2 Sc: 52.2 TCTTTGGTAGTATATCGGTtA.GTACACCCGCTTGTCA..........CGCGGGAG...........AGCGGGGTTCGACTCCCCGCCAGAGAG tRNA-Asp-GTC-1-3 Sc: 52.2 TCTTTGGTAGTATATCGGTtA.GTACACCCGCTTGTCA..........CGCGGGAG...........AGCGGGGTTCGACTCCCCGCCAGAGAG tRNA-Asp-GTC-1-4 Sc: 52.2 TCTCTGGTAGTATATCGGAtA.GTACACCCGCCTGTCA..........CGCGGGAG...........AGCGGGGTTCGACTCCCCGCCAGAGAG tRNA-Asp-GTC-2-2 Sc: 51.7 TCTTTGGTAGTATATCGGAtA.GTACACCCGCTTGTCA..........CGCGGGAG...........AGCGGGGTTCGACTCCCCGCCAGAGAG tRNA-Asp-GTC-3-1 Sc: 48.3 TCTCTGGTAGTATATCGGAtA.GTACACCCGCCTGTCActgtcaagtgCGCGGGAG...........AGCGGGGTTCGACTCCCCGCCAGAGAG tRNA-Asp-GTC-2-1 Sc: 44.4
Cys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GACTCAATAGCTCAGTGGTtA.GAGCATGCGATTGCAGATCGCAGG...........GtCCCGTGTTCAAATCACGGTTGGGTCT tRNA-Cys-GCA-1-1 Sc: 76.2 GACTCAATAGCTCAGTGGTtA.GAGCATGCGATTGCAGATCGCAGG...........GtCCCGTGTTCAAATCACGGTTGGGTCT tRNA-Cys-GCA-1-2 Sc: 76.2
Gln tRNAs
>>>>>>>..>>>...........<<<.>>>>>..................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGCGCTATAGTGTAGTGGTtA.TCACTCAGGATTCTGAtatgaaga...TTCCTGTA...........ACCCAGGTTCGAGCCCTGGTAGCGCCT tRNA-Gln-CTG-2-1 Sc: 64.6 GGCGCTATAGTGTAGTGGTtA.TCACTCAGGATTCTGAtcggaga....TTCCTGTA...........ACCCAGGTTCGAGCCCTGGTAGCGCCT tRNA-Gln-CTG-2-2 Sc: 64.6 GGCGCTATAGTGTAGTGGTtA.TCACTCAGGATTCTGAtacgaagt...TTCCTGTA...........ACCCAGGTTCGAGCCCTGGTAGCGCCT tRNA-Gln-CTG-2-3 Sc: 64.5 GGTTCTGTAGTGTAGCGGTtA.TCACTCGAGATTCTGAgtcgagtc...TTCTCGAA...........ACCCAGGTTCGAATCCTGGCAGGACCT tRNA-Gln-CTG-1-1 Sc: 62.0 >>>>>>>..>>>...........<<<.>>>>>..................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGCGTTATAGTGTAGTGGTtA.TCACTCGGGATTTTGAaacaggct...TTCCCGTA...........ACCCAGGTTCGAACCCTGGTAACGCCT tRNA-Gln-TTG-2-1 Sc: 65.8 GGTGCTATAGTGTAGTGGTtA.TCACTCGGGATTTTGActctgaacatcTTCCCGGA...........ACCCAGGTTCGAACCCTGGTAGCACCT tRNA-Gln-TTG-1-1 Sc: 62.7
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>..................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCGGATATGGTGTAACGGCtA..ACATTGCCGCCTCTCA...........CGCGGCAG...........CTCGGGGTTCGACTCCCCGTATCCGAA tRNA-Glu-CTC-1-1 Sc: 50.9 TCGGATATGGTGTAACGGCtA..ACATTGCCGCCTCTCA...........CGCGGCAG...........CTCGGGGTTCGACTCCCCGTATCCGAA tRNA-Glu-CTC-1-2 Sc: 50.9 TCGGATATGGTGTAACGGCtA..ACATTGCCGCCTCTCA...........CGCGGCAG...........CTCGGGGTTCGACTCCCCGTATCCGAA tRNA-Glu-CTC-1-3 Sc: 50.9 TCGGATATGGTGTAACGGCtA..ACATTGCCGCCTCTCA...........CGCGGCAG...........CTCGGGGTTCGACTCCCCGTATCCGAA tRNA-Glu-CTC-1-4 Sc: 50.9 TCGGATATGGTGTAACGGCtA..ACATTGCCGCCTCTCA...........CGCGGCAG...........CTCGGGGTTCGACTCCCCGTATCCGAA tRNA-Glu-CTC-1-5 Sc: 50.9 TCGGATATGGTGTAACGGCtA..ACATTGCCGCCTCTCA...........CGCGGCAG...........CTCGGGGTTCGACTCCCCGTATCCGAA tRNA-Glu-CTC-1-6 Sc: 50.9 >>>>>>>..>>>>..........<<<<.>>>>....................<<<<...............>>>>>.......<<<<<<<<<<<<. GGCGCTATGGTGTAGTGGT.At.GCACATGGCTCTCATTtggactt....CCGCCACA...........GCCCAGGTTCGATTCCTGGTGGTGCCC tRNA-Glu-CTC-2-1 Sc: 37.7 >>>>>>>..>>>>..........<<<<.>>>>>..................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGATGTGGTGTAGTGGCtA..ACATTGCTGTCTTTCAtattatctgatCACAGCAG...........CCCCGGGTTCGATTCCCGGCGTCGGAA tRNA-Glu-TTC-1-1 Sc: 56.0 TCCGATGTGGTGTAGTGGCtA..ACATTGCTGTCTTTCActactaatgatCACAGCAG...........CCCCGGGTTCGATTCCCGGCGTCGGAA tRNA-Glu-TTC-1-2 Sc: 56.0
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCATTAATGGGGTAGTGGT.A.ACCTGGGTCGTTGCCATCGACCCG...........CCGGGGGTTCGATTCCCCCTTAATGCA tRNA-Gly-GCC-1-1 Sc: 55.3 GCATTAATGGGGTAGTGGT.A.ACCTGGGTCGTTGCCATCGACCCG...........CCGGGGGTTCGATTCCCCCTTAATGCA tRNA-Gly-GCC-1-2 Sc: 55.3 GCATTAATGGGGTAGTGGT.A.ACCTGGGTCGTTGCCATCGACCCG...........CCGGGGGTTCGATTCCCCCTTAATGCA tRNA-Gly-GCC-1-3 Sc: 55.3 GCATTAATGGGGTAGTGGT.A.ACCTGGGTCGTTGCCATCGACCCG...........CCGGGGGTTCGATTCCCCCTTAATGCA tRNA-Gly-GCC-1-4 Sc: 55.3 GCATTAATGGGGTAGTGGT.A.ACCTGGGTCGTTGCCATCGACCCG...........CCGGGGGTTCGATTCCCCCTTAATGCA tRNA-Gly-GCC-1-5 Sc: 55.3 GCATTAATGGGGTAGTGGT.A.ACCTGGGTCGTTGCCATCGACCCG...........CCGGGGGTTCGATTCCCCCTTAATGCA tRNA-Gly-GCC-1-6 Sc: 55.3 GCATTAATGGGGTAGTGGT.A.ACCTGGGTCGTTGCCATCGACCCG...........CCGGGGGTTCGATTCCCCCTTAATGCA tRNA-Gly-GCC-1-7 Sc: 55.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCATCAGTGGTGTAGCGGT.A.ACATTGGGTCTTCCCATGGCCTAG...........CTCCGGGTTCGACTCCCGGCTGATGCA tRNA-Gly-CCC-1-1 Sc: 60.4 GCATCAGTGGTGTAGCGGT.A.ACATTGGGTCTTCCCATGGCCTAG...........CTCCGGGTTCGACTCCCGGCTGATGCA tRNA-Gly-CCC-1-2 Sc: 60.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. ACACCGATGGTGAAGCGGTtA.TCATGCTTGCCTTCCAAGCAAGCG...........GCAGGGGTTCGACTCCCCTTCGGTGTA tRNA-Gly-TCC-1-1 Sc: 62.4 ACACCGATGGTGAAGCGGTtA.TCATGCTTGCCTTCCAAGCAAGCG...........GCAGGGGTTCGACTCCCCTTCGGTGTA tRNA-Gly-TCC-1-2 Sc: 62.4
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<...............>>>>>.......<<<<<<<<<<<<. GTCCCTGTCGATTAGTGGTtA.AATCGCCACGTTGTGGacagcacaaaaCCGTGGCG...........CCGCAGGTTCAATTCCTGCCAGGGACA tRNA-His-GTG-1-1 Sc: 52.5 GTCCCTGTCGATTAGTGGTtA.AATCGCCACGTTGTGGaagcacaata.CCGTGGCG...........CCGCAGGTTCAATTCCTGCCAGGGACA tRNA-His-GTG-1-2 Sc: 52.5 GTCCTTGTCGATTAGTGGTtA.AATCACCTCGTTGTGGtgaccgcaattCCGAGGAG...........CCGCAGGTTCAATTCCTGCCAGGGACA tRNA-His-GTG-2-1 Sc: 51.0 GTCCCTGTCGATTAGTGGCtA.AATCGCCACGTTGTGGaatgtacaagaCCGTGGCG...........CCGCAGGTTCAATTCCTGCCAGGGACA tRNA-His-GTG-3-1 Sc: 48.0 >>>>>>>..>>>>.........<<<<.>>.>>..................<<.<<...............>>>>>.......<<<<<<<<<<<<. GTCCCTGTCGATTAGTGGTtA.AATCACCCCGTTGTGGaatgcacaggaCCGTGGAG...........CCGCAGGTTCAATTCCTGCCAGGGACA tRNA-His-GTG-4-1 Sc: 45.8 GTCCCTGTCGATTAGTGGTtA.AATCACCCCGTTGTGGaatgcacaggaCCGTGGAG...........CCGCAGGTTCAATTCCTGCCAGGGACA tRNA-His-GTG-4-2 Sc: 45.8
Ile tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>............................................................<<<<<.................>>>>.......<<<<.<<<<<<<. GGCCGACTAGCTCAGTTGGTtA..GAGCGTCGTGCTAATA.....................................................ACGCGAAG...........GtCTTGGGTTCGATCCCCACGTTGGCCA tRNA-Ile-AAT-1-1 Sc: 78.3 GGCCGACTAGCTCAGTTGGTtA..GAGCGTCGTGCTAATA.....................................................ACGCGAAG...........GtCTTGGGTTCGATCCCCACGTTGGCCA tRNA-Ile-AAT-1-2 Sc: 78.3 GGCCGACTAGCTCAGTTGGTtA..GAGCGTCGTGCTAATA.....................................................ACGCGAAG...........GtCTTGGGTTCGATCCCCACGTTGGCCA tRNA-Ile-AAT-1-3 Sc: 78.3 GGCCGACTAGCTCAGTTGGTtA..GAGCGTCGTGCTAATA.....................................................ACGCGAAG...........GtCTTGGGTTCGATCCCCACGTTGGCCA tRNA-Ile-AAT-1-4 Sc: 78.3 GGCCGACTAGCTCAGTTGGTtA..GAGCGTCGTGCTAATAtctgtgcagccaaacatcgtgtagccccctccacagtgattgctgcccggtccACGCGAAG...........GtCTTGGGTTCGATCCCCACGTTGGCCA tRNA-Ile-AAT-1-5 Sc: 69.3 >>>>>>>..>>>>...........<<<<.>>>>>............................................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGTCCCATAGCTCAGT.GGTcA..GAGCGTTGTACTTATGaggttacagtcc.........................................ATGCAAGG...........GtCCCGAGTTCAATCCTCGGTGGGACTA tRNA-Ile-TAT-1-1 Sc: 71.9 >>>>>>>..>>>>...........<<<<.>>>.>............................................................<.<<<................>>>>>.......<<<<<<<<<<<<. GGCGCCATAGTGTAGT.GGT.At.GCACACAGAACTTATTgcaacaaccgatct.......................................AT.CTGTA...........G.CCCGGGTTCGATTCCCGGTGGTGCCC tRNA-Ile-TAT-2-1 Sc: 41.8
Leu tRNAs
>>>>>>>..>>>.............<<<.>>>>>.................................................<<<<<..>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GGTTAGATGGCCGAGC.GGTctA.AGGCGCCAGACTAAGG..........................................ATCTGGT.CTCTTC........GGGGGCGTGAGTTCGAATCTCAC.TCTAATCA tRNA-Leu-AAG-2-1 Sc: 75.6 >>>>>>>..>>>.............<<<.>>>>>.................................................<<<<<..>>..............<<..>>>>>.......<<<<<.<<<<<<<. GGTGAGATGGCCGAGC.GGTctA.AGGCGCCAGACTAAGGatcagttcgcactgcgaacacatcttgtactcatccgaggcaATCTGGT.CCGA..........AAGGGCGTGGGTTCGAATCCCAC.TCTCATCA tRNA-Leu-AAG-1-1 Sc: 66.4 GGTGAGATGGCCGAGC.GGTctA.AGGCGCCAGACTAAGGatcagttcgcattgcgaacacatcttgcactctctgaggca.ATCTGGT.CCGA..........AAGGGCGTGGGTTCGAATCCCAC.TCTCATCA tRNA-Leu-AAG-1-2 Sc: 66.4 GGTGAGATGGCCGAGC.GGTctA.AGGCGCCAGACTAAGGatccgatcgaattcgatcacaacttgcactcatctgaggca.ATCTGGT.CCGA..........AAGGGCGTGGGTTCGAATCCCAC.TCTCATCA tRNA-Leu-AAG-1-3 Sc: 66.4 >>>>>>>..>>>.............<<<.>>>>>.................................................<<<<<..>>..............<<..>>>>>.......<<<<<.<<<<<<<. GGCAACTTGGCCGAGC.GGTctA.AGGCGCCAGAATCAGG..........................................ATCTGGT.CCGA..........AAGGGCGTGAGTTCGAATCTCAC.AGTTGTCA tRNA-Leu-CAG-1-1 Sc: 61.7 GGCAACTTGGCCGAGC.GGTctA.AGGCGCCAGAATCAGG..........................................ATCTGGT.CCGA..........AAGGGCGTGAGTTCGAATCTCAC.AGTTGTCA tRNA-Leu-CAG-1-2 Sc: 61.7 >>>>>>>..>>>.............<<<.>>>>>.................................................<<<<<..>>..............<<..>>>>>.......<<<<<.<<<<<<<. GGCACTGTAGCCAAGT.GGTt.A.CGGCGTCACGTTTAGGtcaaggccgagt..............................CCGTGAT.GGGA..........AACCGCGCGAGTTCGAATCTCGT.CAGTGTCA tRNA-Leu-TAG-1-1 Sc: 53.6 >>>>>>>..>>>>...........<<<<.>>.>>.................................................<<.<<..>>>............<<<..>>>>>.......<<<<<.<<<<<<<. GGCAAGATGGCCGAGC.GGTctA.TGGCGTGTGACTCAAGcgaaagcttgcctgcaaagcacaggt................TTCTCAT.CTCTTAAT......TGAGGCGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-CAA-1-1 Sc: 57.8 >>>>>>>..>>>.............<<<.>.>>>.................................................<<<.<..>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GGTAGCGTGGCCGAGTTGGTctA.AGGCGTTGGATTTAAGtatttga...................................ATCCCAATGGGCGTAA......GTCCGCGCGAGTTCGAACCTCGC.CGCTACCA tRNA-Leu-TAA-1-1 Sc: 67.5
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGCCTAGCTCAATCGGAtAGAGCGTCAGACTCTTAagactaggcg...........ATCTGAAG...........GcTGCGAGTTCGACCCTCGCGGTGGGCT tRNA-Lys-CTT-1-3 Sc: 71.0 GCCCGCCTAGCTCAATCGGAtAGAGCGTCAGACTCTTAtgactaggcg...........ATCTGAAG...........GcTGCGAGTTCGACCCTCGCGGTGGGCT tRNA-Lys-CTT-1-1 Sc: 70.9 GCCCGCCTAGCTCAATCGGAtAGAGCGTCAGACTCTTAtgactaggcg...........ATCTGAAG...........GcTGCGAGTTCGACCCTCGCGGTGGGCT tRNA-Lys-CTT-1-2 Sc: 70.9 GCCCGCCTAGCTCAATCGGAtAGAGCGTCAGACTCTTAtgactaggcg...........ATCTGAAG...........GcTGCGAGTTCGACCCTCGCGGTGGGCT tRNA-Lys-CTT-1-4 Sc: 70.9 >>>>>>>..>>>>.........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGCCTAGCTCAATCGGCcAGAGCGTCAGACTTTTAagactagag............ATCTGAAG...........GcTGCGAGTTCGACCCTCGCGGTGGGCT tRNA-Lys-TTT-1-2 Sc: 70.4 GCCCGCCTAGCTCAATCGGCcAGAGCGTCAGACTTTTAcgatcgtgttgtacaatcgctATCTGAAG...........GcTGCGAGTTCGACCCTCGCGGTGGGCT tRNA-Lys-TTT-1-1 Sc: 69.9
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>......................................<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCCTTGGCTCAGCTGGTtA.GAGCGCTGGTCTCATAtgcctatgaggttgcacatgcaatcgta.ATCCAGAG...........GtCGCCAGTTCGATCCTGGCAGGGAGCA tRNA-Met-CAT-1-1 Sc: 74.2 GCTTCCTTGGCTCAGCTGGTtA.GAGCGCTGGTCTCATAgtgactatgaggttgcaaaggtaaccgtaATCCAGAG...........GtCGCCAGTTCGATCCTGGCAGGGAGCA tRNA-Met-CAT-1-2 Sc: 74.2 >>>>>>>..>>>>..........<<<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGCAACATGGCGCAGT.GGA.A.GCGCGCGGGGCTCATA.............................ACCCCGAG...........GtCACTCGATCGAAACGAGTTGTTGCTA tRNA-iMet-CAT-2-1 Sc: 63.0 AGCAGCATGGCGCAGC.GGA.A.GCGCGCGGGGCTCATA.............................ACCCCGAG...........GtCACTCGATCGAAACGAGTTGCTGCTA tRNA-iMet-CAT-1-1 Sc: 61.3
Phe tRNAs
>>>>>>>..>>>>........<<<<..>>>>..................<<<<.................>>>>>.......<<<<<<<<<<<<. GCCGGGATAGCTCAGCTGGGAGAGCAACAGACTGAAGtgcttccgca.TTCTGGAG...........GtCCCGTGTTCAATCCACGGTCCTGGCA tRNA-Phe-GAA-1-1 Sc: 66.8 GCCGGGATAGCTCAGCTGGGAGAGCAACAGACTGAAGtgccacggca.TTCTGGAG...........GtCCCGTGTTCAATCCACGGTCCTGGCA tRNA-Phe-GAA-1-2 Sc: 66.8 GCCGGGATAGCTCAGCTGGGAGAGCAACAGACTGAAGcctatctgga.TTCTGGAG...........GtCCCGTGTTCAATCCACGGTCCTGGCA tRNA-Phe-GAA-1-4 Sc: 66.8 GCCGGGATAGCTCAGCTGGGAGAGCAACAGACTGAAGcgaataaagccTTCTGGAG...........GtCCCGTGTTCAATCCACGGTCCTGGCA tRNA-Phe-GAA-1-3 Sc: 66.7
Pro tRNAs
>>>>>>>..>>>..........<<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTGATGGTCTAGTAGTA.TGATTCCTTGTTAGGGctagaaagcaatc................TCGAGGAG...........GtCCCGGGTTCAATTCCCGGTCAGGCCC tRNA-Pro-AGG-1-2 Sc: 58.1 GGCCTGATGGTCTAGTAGTA.TGATTCCTTGTTAGGGcttctcaaagcaatc..............TCGAGGAG...........GtCCCGGGTTCAATTCCCGGTCAGGCCC tRNA-Pro-AGG-1-1 Sc: 58.0 GGCCTGATGGTCTAGTAGTA.TGATTCCTTGTTAGGGctttaacatagcaatc.............TCGAGGAG...........GtCCCGGGTTCAATTCCCGGTCAGGCCC tRNA-Pro-AGG-1-3 Sc: 58.0 GGCCTGATGGTCTAGTAGTA.TGATACCTTGTTAGGGttttccggagcagtt..............TCGAGGTG...........GtCCCGGGTTCAATTCCCGGTCAGGCCC tRNA-Pro-AGG-2-1 Sc: 57.6 >>>>>>>..>>>..........<<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCCAGTGGTCTAGTAGTA.TGATACTCGCTTCGGGtaacacccccgcacttggtgtggaagca.TGTGAGTG...........GtCCCGGGTTCAATTCCCGGCTGGGCCC tRNA-Pro-CGG-1-1 Sc: 55.9 GGCCCAGTGGTCTAGTAGTA.TGATACTCGCTTCGGGtaagtccctcataccttggtatgaaaattTGTGAGTG...........GtCCCGGGTTCAATTCCCGGCTGGGCCC tRNA-Pro-CGG-1-2 Sc: 55.8 >>>>>>>..>>>>........<<<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCCAATGGTCTAGTGGTA.AGATACTTGCTTTGGGtacacacaat...................TGCAAGGG...........AtCCTGGGTTCGAATCCCAGTTGGACCC tRNA-Pro-TGG-1-1 Sc: 61.2
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>...........<<<.>>>>>.................<<<<<..>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GGCGCTATAGCTAAGTGGTtA.CAGCGACAGATTAGAA..........ATCTGTT.CCTCTTG.......GAGGGCGCAGGTTCGAATCCTGC.TGGCGTCG tRNA-Ser-AGA-3-1 Sc: 75.4 GGCGCTATAGCCAAGTGGTtA.CGGCGACAGATTAGAA..........ATCTGTT.CCTCTTT.......GAGGGCGCAGGTTCGAATCCTGC.TGGCGTCG tRNA-Ser-AGA-1-1 Sc: 75.2 GGCGCTATAGCTAAGTGGTtA.CAGCGACAGATTAGAA..........ATCTGTT.CCTCTTC.......GAGGGCGCAGGTTCGAATCCTGC.TGGCGTCG tRNA-Ser-AGA-2-1 Sc: 73.4 >>>>>>>..>>>...........<<<.>>>>>.................<<<<<..>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GGCACTATAGCCAAGTGGTtA.CGGCGACAGATTCGAAttgctcgactATCTGTT.CCTCTTT.......GAGGGCGCAGGTTCGAATCCTGC.TGGTGTCG tRNA-Ser-CGA-1-1 Sc: 66.4 GGCACTATAGCCAAGTGGTtA.CGGCGACAGATTCGAAtcatccgattATCTGTT.CCTCTTT.......GAGGGCGCAGGTTCAAATCCTGC.TGGTGTCG tRNA-Ser-CGA-2-1 Sc: 65.3 >>>>>>>..>>>...........<<<.>>>>>.................<<<<<..>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GCTGATATGGCCGAGTCGTtA.AGGCGAGTGATTTGAAttactcatc.ATCACTT.GGGCATT.......GCCCGCGTAGGTTCAAATCCTGC.TGTCAGCG tRNA-Ser-TGA-1-1 Sc: 65.6 >>>>.>>..>>>>.........<<<<..>>>>.................<<<<.......................>>>>>.......<<<<<.<<.<<<<. GGTCAGATAGCCTAGTGGT.A.AGGCAACCCAGTACTA..........GTGGGAGG..................ACCCGGGTTCGATTCCCGG.TCAGACCA tRNA-Ser-ACT-1-1 Sc: 52.1 GGTCAGATAGCCTAGTGGT.A.AGGCAACCCAGTACTA..........GTGGGAGG..................ACCCGGGTTCGATTCCCGG.TCAGACCA tRNA-Ser-ACT-1-2 Sc: 52.1 GGTCAGATAGCCTAGTGGT.A.AGGCAACCCAGTACTA..........GTGGGAGG..................ACCCGGGTTCGATTCCCGG.TCAGACCA tRNA-Ser-ACT-1-3 Sc: 52.1 GGTCAGATAGCCTAGTGGT.A.AGGCAACCCAGTACTA..........GTGGGAGG..................ACCTGGGTTCAATTCCCGG.TCAGACCA tRNA-Ser-ACT-3-1 Sc: 47.7 GGTCAGATAGCCTAGTGGT.A.AGGCAACCCAGTACTA..........GTGGGAGG..................ACCTGGGTTCAATTCCCGG.TCAGACCA tRNA-Ser-ACT-3-2 Sc: 47.7 GGTCAGATAGCCTAGTGGT.A.AGGCAACTCAGTACTA..........GTGGGAGG..................ACCCGGGTTCGATTCCCGG.TCAGACCA tRNA-Ser-ACT-2-1 Sc: 47.5 GGTCAGATAGCCTAGTGGT.A.AGGCAACTCAGTACTA..........GTGGGAGG..................ACCCGGGTTCGATTCCCGG.TCAGACCA tRNA-Ser-ACT-2-2 Sc: 47.5 >>>>.>>..>.>>.........<<.<.>.>>>.................<<<.<......................>>>.>.......<.<<<.<<.<<<<. GGTCAGATAGTCTGGTGGTtA.GG.CATCCCAGTACTA..........GTGGAAGG..................ACCTGAGTTCAATTCCCAG.TCAGACCA tRNA-Ser-ACT-4-1 Sc: 24.5 >>>>>>>..>>>...........<<<.>>>>>.................<<<<<..>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GTCACTTTGCCGGAGTGGTtA.ACGGGATCGCCTGCTAattcagcac.AGCGGTT.GGGCTTT.......GCCCGCGAGTGTTCGAATCGCTC.AGGTGACG tRNA-Ser-GCT-1-1 Sc: 56.6 GTCACTTTGCCGGAGTGGTtA.ACGGGATCGCCTGCTAttttcagcacAGCGGTT.GGGCTTT.......GCCCGCGAGTGTTCGAATCGCTC.AGGTGACG tRNA-Ser-GCT-1-2 Sc: 56.6
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCGTTTAGCTCAGTTGGTA.GAGCGCGTCACTAGTA...............ATGACGAG...........GtCAGTCGTTCGAGTCGGCTAATGGGAA tRNA-Thr-AGT-1-1 Sc: 74.2 TCCCGCTTAGCTCAGCTGGTA.GAGCGCGTCACTAGTA...............ATGACGAG...........GtCAGTCGTTCAAGTCGGCTAGTGGGAA tRNA-Thr-AGT-2-1 Sc: 71.4 TCCCGTTTAGCTCAGCTGGTA.GAGCGCGTCACTAGTA...............ATGACGAG...........GtCAGTCGTTCAAGTCGGCTAATGGGAA tRNA-Thr-AGT-3-1 Sc: 70.7 TCCCGTTTAGCTCAGCTGGTA.GAGCGCGTCACTAGTAttataaatattagtaATGACGAG...........GtCAGTCGTTCAAGTCGGCTAATGGGAA tRNA-Thr-AGT-3-2 Sc: 63.2 >>>>>>>..>>>>.........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGTTTAGCTCAGT.GGTA.GAGCGCGCCACTCGTA...............ATGGTGAG...........GtCGGTTGTTCAATCCAGCCAATGGGCA tRNA-Thr-CGT-1-1 Sc: 73.9 GCCCGTTTAGCTCAGT.GGTA.GAGCGCGCCACTCGTA...............ATGGTGAG...........GtCGGTTGTTCAATCCAGCCAATGGGCA tRNA-Thr-CGT-1-2 Sc: 73.9 >>>>>>>..>>>>.........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGCTTAGCTCAGT.GGTA.GAGCGCGTCACTTGTAacattgag.......ATGATGAG...........GtCGGTTGTTCAATCCAGCCAGTGGGCA tRNA-Thr-TGT-1-1 Sc: 67.8
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>...................<<<<................>>>>>.......<<<<<<<<<<<<. GGACCCGTGGCGCAGTGGTA.GCGCGTGTGATTCCAGtagttgagcaTCCACAAG...........GtCATCCGTTCAATCCGGGTCGGGTTCA tRNA-Trp-CCA-1-1 Sc: 57.3 GGACCCGTGGCGCAGTGGTA.GCGCGTGTGATTCCAGcctgggaat.TCCACAAG...........GtCATCCGTTCAATCCGGGTCGGGTTCA tRNA-Trp-CCA-2-1 Sc: 56.0
Tyr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>....................<<<<<................>>>>>.......<<<<<<<<<<<<. CCGACCTTAGCTCAGTTGGAAGAGCGCGAGACTGTAAtggataccttggcATCTTGAG...........GtCGCCTGTTCGAGCCAGGCAGGTCGGA tRNA-Tyr-GTA-1-1 Sc: 63.2 CCGATCTTAGCTCAGTTGGAAGAGCGCGAGACTGTAAtggttaactgatcATCTTGAG...........GtCGCCTGTTCGAGCCAGGCAGATCGGA tRNA-Tyr-GTA-3-1 Sc: 62.9 CCGACTTTAGCTCAGTTGGAAGAGCGCGAGACTGTAAtggttaactgatcATCTTGAG...........GtCGCCTGTTCGAGCCAGGCAAGTCGGA tRNA-Tyr-GTA-2-1 Sc: 62.4
Val tRNAs
>>>>>>>..>>>............<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTGATGGCGTAGTTGGTtA.TCGCATCTGTCTAACA..................CACAGAAG...........GtCCCCAGTTCGAGCCTGGGTTAGGTCA tRNA-Val-AAC-1-1 Sc: 78.1 GGCCTGGTGGCGTAGTTGGTtA.TCGCATCTGTCTAACA..................CACAGAAG...........GtCCCCTGTTCGAGCCAGGGTTAGGTCA tRNA-Val-AAC-2-1 Sc: 73.1 GGCCTGATGGCGTAGTTGGTtA.TCGCATCTGTCTAACA..................CACAGAAG...........GtCTCCTGTTCGAGCCAGGATCAGGTCA tRNA-Val-AAC-3-1 Sc: 71.3 GGCCTGATGGCGTAGTTGGTtA.TCGCATCTGTCTAACA..................CACAGAAG...........GtCTCCTGTTCGAGCCAGGGTTAGGTCA tRNA-Val-AAC-4-1 Sc: 69.0 GGCCTGATGGCGTAGTTGGTtA.TCGCATCTGTCTAACA..................CACAGAAG...........GtCTCCTGTTCGAGCCAGGGTTAGGTCA tRNA-Val-AAC-4-2 Sc: 69.0 >>>>>>>..>>>............<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCAATGGTCTAAT.GGTtA.TGATTTCTGTCTCACActtcggtg..........CACAGAAG...........GtTCTGAGTTCGATCCTCAGTTGAACCA tRNA-Val-CAC-1-1 Sc: 63.0 GGTTGAATGGTCTAAT.GGTtA.TGATTTCTGTCTCACAtcttgagattgtggatttCACAGAAG...........GtTCTGAGTTCGATCCTCAGTTCAACCA tRNA-Val-CAC-2-1 Sc: 62.3 >>>>>>>..>>>............<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCAATGGTCTAGT.GGTtA.TGATTTCTGTCTTACA..................CACAGAAG...........GtCCTGAGTTCGATCCTCAGTTGAACCA tRNA-Val-TAC-1-1 Sc: 75.3