Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>............<...<<.>>>>>..........................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGGATGGTTTAGT.GGT.A.TA...ATACTCCCTTAGCAtctcatccaactggaagatcccgct..........................................................TGGGAGTG...........GtCCGGGGTTCGATTCCCCGTCTGTCCA tRNA-Ala-AGC-2-1 Sc: 64.5 GGGCGAATGGTTTAGT.GGT.A.TA...ATACTCCCTTAGCAtcttgagagat........................................................................TGGGAGTG...........GtCCGGGGTTCGATTCCCCGTTTGTCCA tRNA-Ala-AGC-1-1 Sc: 63.7 GGGCGAATGGTTTAGT.GGT.A.TA...ATACTCCCTTAGCAtctgctgttccagcgggtacaacgat.........................................................TGGGAGTG...........GtCCGGGGTTCGATTCCCCGTTTGTCCA tRNA-Ala-AGC-1-3 Sc: 63.2 GGGCGAATGGTTTAGT.GGT.A.TA...ATACTCCCTTAGCAtcagctttacagcggatccagcgat..........................................................TGGGAGTG...........GtCCGGGGTTCGATTCCCCGTTTGTCCA tRNA-Ala-AGC-1-4 Sc: 63.2 GGGCGAATGGTTTAGT.GGT.A.TA...ATACTCCCTTAGCAttcgatccccttgtctccttcgagatttgggcgatttattcac........................................TGGGAGTG...........GtCCGGGGTTCGATTCCCCGTTTGTCCA tRNA-Ala-AGC-1-2 Sc: 62.5 >>>>>>>..>>>>..........<<...<<...>.>..........................................................................................<.<..................>>>>>.......<<<<<<<<<<<<. GGTCCAGTGGTCTAGT.GGGtA.AGtttACGACACCTTGCTTgactggcaatcagttgcttacgtaatcacagtatgattgtagcttcgggcaccacttgcgtcctcctccggaaaaccggaattTGTTACAG...........GcCCCGGGTTCAAATCCCGGCTGGACCC tRNA-Ala-GGC-1-1 Sc: 29.4 >>>>>>>..>>>............<...<<.>>>>>..........................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCTAATGGTCTAGT.GGT.A.TG...ATTTTCCGTTCGCAtgttcaaacgtgtaac...................................................................TCGGAAAG...........GtCCCGCGTTCAATCCGCGGTTAGTCCA tRNA-Ala-CGC-1-1 Sc: 59.3 GGGCCTGTGGTCTAGG.GGT.A.TG...ATCCTCGATCCGCAcctgtgcagctctgagttgcaatacagttggtt..................................................ATTGAGTG...........GtCCGGGGTTCAAATCCCCGTAGGTCCA tRNA-Ala-CGC-2-1 Sc: 49.6 >>>>>.>..>>>>..........<<...<<.>>>>>..........................................................................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGATATAATTCAATTGGT.A.GA...ATGTTAACTTTGCA...................................................................................AGTTAAAA...........G.CCTAGGTTCGATTCCTAGTTTCTCCA tRNA-Ala-TGC-2-1 Sc: 62.6 >>>>>>>..>>>............<...<<.>>>>>..........................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCTAATGGTCTAGG.GGT.A.TG...ATTTTCGTTTTGCAtacacagggataccgatgacctccgcaccgcaaggtagtaggattaggtccccagtagttcac....................TACGAAAG...........GtCCGGGGTTCAAATCCCCGTTGGTCCA tRNA-Ala-TGC-1-1 Sc: 55.8
Arg tRNAs
>>>>>>>..>>>...........<<<.>>>>>......................................................................<<<<<......................>>>>>.......<<<<<.<<<<<<..<. GGTCGCGTGGCCAAATGGC.A.AGGCGTCTGGCTACGA...............................................................ACCAGAAG.................AtTGTGGGTTCGATCCCCAC.CGTGAC..CT tRNA-Arg-ACG-1-1 Sc: 73.2 GGTCGCGTGGCCAAATGGC.A.AGGCGTCTGGCTACGA...............................................................ACCAGAAG.................AtTGTGGGTTCGATCCCCAC.CGTGAC..CT tRNA-Arg-ACG-1-2 Sc: 73.2 GGTCGCGTGGCCAAATGGC.A.AGGCGTCTGGCTACGA...............................................................ACCAGAAG.................AtTGTGGGTTCGATCCCCAC.CGTGAC..CT tRNA-Arg-ACG-1-3 Sc: 73.2 GGTCGCGTGGCCAAATGGC.A.AGGCGTCTGGCTACGA...............................................................ACCAGAAG.................AtTGTGGGTTCGATCCCCAC.CGTGAC..CT tRNA-Arg-ACG-1-4 Sc: 73.2 GGTCGCGTGGCCAAATGGC.A.AGGCGTCTGGCTACGA...............................................................ACCAGAAG.................AtTGTGGGTTCGATCCCCAC.CGTGAC..CT tRNA-Arg-ACG-1-5 Sc: 73.2 >>>>>>>..>>>>.........<<<<.>>>>>......................................................................<<<<<......................>>>>>.......<<<<<.<<<<<<..<. TAGATATTAGTTTAATGGT.A.GAACAAGACACTACGG...............................................................ATGTCTAG.................A.TAATAGTTCGAATCTATT.ATATCTttAG tRNA-Arg-ACG-2-1 Sc: 45.2 >>>>>>>..>>>...........<<<.>>>>>......................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<..<. GTCACTTTGGCCGAGTGGTtA.AGGCGGTGCCCTGCGTatgtactcacccgttcttccgacagtccatcaccactaacagcctcccagta...........AGGCATT.ACGTTC.......GCGTG.CGTAGGTTCGAATCCTGC.AGGTGA..CG tRNA-Arg-GCG-3-1 Sc: 54.3 GACACTTTGGCCGAGTGGTtA.AGGCGGTGCCCTGCGTacgtacacacaaacaccgacttccaaagactcttacgctaacagcctaactagta........AGGCATT.ACGTTC.......GCGTG.CGTAGGTTCGAATCCTGC.AGGTGT..CG tRNA-Arg-GCG-2-1 Sc: 52.8 >>>>>>>..>>>>.........<<<<.>>>>>......................................................................<<<<<......................>>>>>.......<<<<<.<<<<<<..<. GCCCCCTTGGCCTAATGGCtA.AGGCGCAAGAGTGCGTacccgcttagatcttgtcgttgtatctccagcaagctaacctagcatagcttctattctcgaaATCTTGAG.................AtTGCCGGTTCGAGTCCGGC.AGGGGG..TG tRNA-Arg-GCG-1-1 Sc: 46.6 >>>>>>>..>>>>.........<<<<.>>>>>......................................................................<<<<<......................>>>>>.......<<<<<.<<<<<<..<. GGCCTCGTGGCCTAATGGCtA.AGGCATCGGTTTCCGG...............................................................TACCGGAG.................AtTCCAGGTTCGAGTCCTGG.CGGGGT..CG tRNA-Arg-CCG-1-1 Sc: 60.4 >>>>>>>..>>>>.........<<<<.>>>>>......................................................................<<<<<......................>>>>>.......<<<<<.<<<<<<..<. GGCCGCGTGGCCTAATGGCtA.AGGCGCTAGATTTCGGtcctcccttgacgatatt.............................................CTCTAGAG.................AtTCCAGGTTCGACTCCTGG.CGTGGT..CG tRNA-Arg-TCG-1-1 Sc: 59.1 GGCCGCGTGGCCTAATGGCtA.AGGCGCTAGATTTCGGtcaaccgtatcccaatt..............................................CTCTAGAG.................AtTCCAGGTTCGACTCCTGG.CGTGGT..CG tRNA-Arg-TCG-1-2 Sc: 59.1 >>>>>>>..>>>>.........<<<<.>>>>>......................................................................<<<<<......................>>>>>.......<<<<<.<<<<<<..<. GGTGTGCTGGCGCAATGGG.A.GCGCGTAGTCCTCCTA...............................................................AGACTAAG.................GtTGAGGGTTCGAGTCCCTC.GTACAT..CG tRNA-Arg-CCT-1-1 Sc: 65.4 >>>>>>>..>>>>.........<<<<.>>>>>......................................................................<<<<<......................>>>>>.......<<<<<.<<<<<<..<. GTCTCATTAGCTCAATGGC.A.GAGCTTAATACTTCTA...............................................................ATATTATG.................A.TCCTAGTTCGATTCTGGG.ATGAGA..CT tRNA-Arg-TCT-1-1 Sc: 60.3
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCCTGTAGCTCAGTTGGCtA.GAGCGTCAGACTGTTAATCTGAAG...........GtCGTAAGTTCAAACCTTACCGGGGGAG tRNA-Asn-GTT-1-1 Sc: 82.0 TCCCCTGTAGCTCAGTTGGCtA.GAGCGTCAGACTGTTAATCTGAAG...........GtCGTAAGTTCAAACCTTACCGGGGGAG tRNA-Asn-GTT-1-2 Sc: 82.0 GCTTCTATAGCTCAAT.GGT.A.GAGCATAATACTGTTAATATTATG...........A.TAAATGTTCGATTCATTTTAGGGGCT tRNA-Asn-GTT-2-1 Sc: 57.2
Asp tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. TCTTCCGTAGTATAGT.GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-1 Sc: 69.5 TCTTCCGTAGTATAGT.GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-2 Sc: 69.5 TCTTCCGTAGTATAGT.GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-3 Sc: 69.5 TCTTCCGTAGTATAGT.GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-4 Sc: 69.5 TCTTCCGTAGTATAGT.GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-5 Sc: 69.5 >>>>>>>...>>>..........<<<..>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GATCTAGTAACTTAATTGGT.A.AAGGATTTCCTTGTCACGGAAATA...........GaTGTCGGTTCGATGCTGATCTAGGTCG tRNA-Asp-GTC-2-1 Sc: 26.0
Cys tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.............................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. ACCCGGTTAGCTCAATTGGCtA.GAGCGTTGGACTGCAAgttccccgcttcatcccgtcttgtagcatcaagctaaccgtttccacagtttacggaatcatcctaatcaATCCAAAG...........GcTACGAGTTCGACCCTCGTACTGGGTG tRNA-Cys-GCA-3-1 Sc: 63.9 GCTCGGATAACTCAGT.GGT.A.GAGTACGGGATTGCAGtgaggtgtttacacattcaccagcgaaat.........................................ATCCTGAA...........GtCGCTGGTTCGATCCCGGCTTCGAGCT tRNA-Cys-GCA-2-1 Sc: 62.7 GCTCGGATAACTCAGT.GGT.A.GAGTACGGGATTGCAGctaagtgggtaaccaccagtaagatt............................................ATCCTGAA...........GtCGTCGGTTCGATCCCGGCTCCGAGCT tRNA-Cys-GCA-1-1 Sc: 60.6
Gln tRNAs
>>>>>>>..>>>...........<<<.>>>>>...................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTTCATGGTCTAACGGTtA.TGACTGCGGATTCTGA............TTCCGCCA...........GCGAGGGTTCGACTCCCTCTGAGACCT tRNA-Gln-CTG-1-1 Sc: 58.0 >>>>>>>..>>>...........<<<.>>>>>...................<<<<<...............>.>>>.......<<<.<<<<<<<<. GGTTCCATGGTCTAACGGTtA.TGACTGCGGATTCTGA............TTCCGCCA...........GCGAGGGTTCGACTCCCCCTGGAACCT tRNA-Gln-CTG-2-1 Sc: 53.0 GGTTCCATGGTCTAACGGTtA.TGACTGCGGATTCTGA............TTCCGCCA...........GCGAGGGTTCGACTCCCCCTGGAACCT tRNA-Gln-CTG-2-2 Sc: 53.0 >>>>>>>..>>>...........<<<.>>>>>...................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCCTCATTAGTCTAGGGGTtA.CGACGTTGGATTTTGActaacccagtccTTCCAAAA...........GCATCAGTTCGAATCTGATATGAGGCT tRNA-Gln-TTG-1-1 Sc: 51.5
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCAatgaagaa........CCGAGCAG...........C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-1 Sc: 49.3 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCAaccaagaa........CCGAGCAG...........C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-2 Sc: 49.3 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCAacaaagaa........CCGAGCAG...........C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-3 Sc: 49.3 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCAagtctgaa........CCGAGCAG...........C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-4 Sc: 49.3 >>>>>>>..>>>>.........<<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCGATGTCGTCTAGTGGTtA.GGATCCTGCGCTTTCAtaatgcttgagtg...CCGCAGTG...........G.CCGGGGTTCAATTCCCCGCATCGGAG tRNA-Glu-TTC-1-1 Sc: 55.0 TCCGATGTCGTCTAGTGGTtA.GGATCCTGCGCTTTCAtgttcacccttgagtgCCGCAGTG...........G.CCGGGGTTCAATTCCCCGCATCGGAG tRNA-Glu-TTC-1-2 Sc: 54.9 >>>>>>>..>>>...........<<<.>>>>.........................<<<<................>>>>>.......<<<<<<<<<<<<. GGATTAGTAGTCAAGCGGT.A.AGACATAGCTCTTTCA................ATGCTACC...........AtCGCAGGTTCGATCCCTGTCTAGTCTA tRNA-Glu-TTC-2-1 Sc: 51.9
Gly tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCAATCATAAGTTAAG.GGT.A.AACTTTTCGTTTACCA.........AGCGAAA............TtTGTCAGTTCGATTCTGAC.TGGTTGTA tRNA-Gly-ACC-1-1 Sc: 35.4 >>>>>>>..>>>>..........<<<<.>>>>>................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCGTTATTGGTTTAGT.GGT.A.AAATTCTCCGTTGCCAtcagcaacgTCGGGGAG...........C.CCTGGGTTCGATTCCCAG.ATAACGCA tRNA-Gly-GCC-1-1 Sc: 59.0 GCGTGATTGGTTTAGT.GGT.A.AAATTCTCCGTTGCCAtcagcaacgTCGGGGAG...........C.CCTGGGTTCGATTCCCAG.ATCACGCA tRNA-Gly-GCC-2-1 Sc: 58.9 GCGTGATTGGTTTAGT.GGT.A.AAATTCTCCGTTGCCAtccgcaacgTCGGGGAG...........C.CCTGGGTTCGATTCCCAG.ATCACGCA tRNA-Gly-GCC-2-2 Sc: 58.9 GCGTGATTGGTTTAGT.GGT.A.AAATTCTCCGTTGCCAtccgcaacgTCGGGGAG...........C.CCTGGGTTCGATTCCCAG.ATCACGCA tRNA-Gly-GCC-2-3 Sc: 58.9 GCGTGATTGGTTTAGT.GGT.A.AAATTCTCCGTTGCCAtcagcaacgTCGGGGAG...........C.CCTGGGTTCGATTCCCAG.ATCACGCA tRNA-Gly-GCC-2-4 Sc: 58.9 GCGTGATTGGTTTAGT.GGT.A.AAATTCTCCGTTGCCAtccgcaacgTCGGGGAG...........C.CCTGGGTTCGATTCCCAG.ATCACGCA tRNA-Gly-GCC-2-5 Sc: 58.9 GCGTGATTGGTTTAGT.GGT.A.AAATTCTCCGTTGCCAtccgcaacgTCGGGGAG...........C.CCTGGGTTCGATTCCCAG.ATCACGCA tRNA-Gly-GCC-2-6 Sc: 58.9 >>>>>>>..>>>>..........<<<<.>>>>>................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCGCGGATAGTGTAGT.GGTtA.GCATGCGTGCTTCCCA.........AGCACGC............GtCCCGGGTTCGAATCCCGG.TTCGCGCA tRNA-Gly-CCC-1-1 Sc: 76.4 >>>>>>>..>>>>..........<<<<.>>>>>................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCGTCGTTGGTCTAGG.GGTtA.GGATTCAACTCTTCCA.........AAGTTGAG...........G.CACGGATTCGAGTTCCGT.ACGACGCA tRNA-Gly-TCC-1-1 Sc: 56.4 ACGGGTATAAGTTAATAGGT.A.GACTATTCGATTTCCA.........CTCGAAAT...........G.AGTCAGTTCAAATCTGAC.TACCCGTA tRNA-Gly-TCC-2-1 Sc: 42.1
His tRNAs
>>>.>>>..>>>>..........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<.<<<. GCCACAGTCGTCTAGG.GGTcA.GGACACTAGTTTGTGGagtttacagcaccgcgaac.CACTGGAA...........A.CCGAGGTTCGAGTCCTCGCTGCGGCA tRNA-His-GTG-1-1 Sc: 46.0 GCCACAGTCGTCTAGG.GGTcA.GGACACTAGTTTGTGGagtttacaacaccgcgaac.CACTGGAA...........A.CCGAGGTTCGAGTCCTCGCTGCGGCA tRNA-His-GTG-1-2 Sc: 46.0 GCCACAGTCGTCTAGG.GGTcA.GGACACTAGTTTGTGGaggatattttctacgcaaacCACTGGAA...........A.CCGAGGTTCGAGTCCTCGCTGCGGCA tRNA-His-GTG-1-3 Sc: 46.0 >>>>..>..>>>>..........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<..<<<<. GTGGTTATAGTTCAATCGGT.A.GAGCAGCTATTTGTGG....................CATAGCAA...........GtTCCCTGTTCGAACCAGGGTTTCCACC tRNA-His-GTG-2-1 Sc: 34.3
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCTCGTGTAGCTCAGTTGGTtA.GAGCGTCGTACTAATAccgggcgaaagtcaaatattggta............ATGCGAAG...........GtCGTAGGTTCAATCCCTGC.CATGAGCA tRNA-Ile-AAT-1-1 Sc: 77.5 GCTTCCATAGCTCAGTTGGTtA.GAGCGTCGTACTAATAtggacacaattccgtctttggtg.............ATGCGAAT...........GtCGCAGGTTCAATCCCTGC.TGGGAGCA tRNA-Ile-AAT-2-1 Sc: 77.3 GCTTCCATAGCTCAGTTGGTtA.GAGCGTCGTACTAATAattgggcatctgttcaatcacgagta..........ATGCGAAT...........GtCGCAGGTTCAATCCCTGC.TGGGAGCA tRNA-Ile-AAT-2-2 Sc: 77.2 GGTCTACTAGCTCAGTCGGTtA.GAGCGTCGTACTAATAtcggcattcaaacaccaatatatggta.........ATGCGAAG...........GtCACAGGTTCAATCCCTGT.GTGGACCA tRNA-Ile-AAT-3-1 Sc: 72.6 >>>>>>>..>>>>..........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GATTCCTTAGCTTAATCGGT.A.AAGCATATTATTGATA....................................ATAATAA............GtTCTGCGTTCAATTCGCGG.AGGAATTA tRNA-Ile-GAT-1-1 Sc: 50.0 >>.>>>>..>>>>..........<<<<.>>>>.............................................<<<<................>>>>>.......<<<<<.<<<<.<<. GTCCCCGTTGCACAGT.GGTtA.GTGCGTGACTCTTATAgctaacagccactttggttttggttttatgatttacATGTCAAG...........GtCCGGGGTTCGAACCCCCG.CGGGAACA tRNA-Ile-TAT-1-1 Sc: 58.6
Leu tRNAs
>>>>.>>>..>>>>.............<<<<.>>>>>...................................................................................................................................................<<<<<..>>..............<<....>>>>>.......<<<<<.<<<<<<<. GGCA.AGATGGCCGAGTaTGGTt.A..TGGCGCCAGGTTAAGGataccttaacacctct............................................................................................................................TCCTGGTGGAGC..........AATCCt.CCTGGGTTCAAATCCCAG.TCTTGTCA tRNA-Leu-AAG-1-1 Sc: 53.4 >>>>.>>>..>>.................<<....>>...................................................................................................................................................<<...........................>>>>>.......<<<<<.<<<<<<<. GGTG.AGATGGCCGAGT.TGGT.....AAGCA...GCCCTGAAcaactagcccttgtcaatcactagtgctaacaactgtcataggttatggcgccaggttaaggacaccttaatatgtttcctggtgg......................................................AGCAATC...................Ct.CATGGGTTCGAATCCCAT.TCTCATCA tRNA-Leu-AAG-2-1 Sc: 27.2 >>>>.>>>..>.>>.............<<.<.>>.........................................................................................................................................................<<..>>..............<<....>>>>>.......<<<<<.<<<<<<<. GGTG.AGATGGCCGAGT.TGGT..A..TGTTTCC...TTCACAgcaccttactagccgacccacgtctaacaacttcaaacaggttatggcgccaggttaaggacaccttaatatgttt................................................................CCT.GGTGGAGC..........AATCCt.CATGGGTTCGAATCCCAT.TCTCATCA tRNA-Leu-AAG-3-1 Sc: 26.2 >>>>.>>>..>>.................<<.>>.........................................................................................................................................................<<..>>..............<<....>>>>>.......<<<<<.<<<<<<<. GGTG.AGATGGCCGAGT.TGGT.....AAGCACC...CCTGAAcaaccaccgtcaatcaacttcgtggctaacatctgcaaaaggttatggcgccaggttaaggtcaccttaacgtgtgt...............................................................CCT.GGTGGAGC..........AATCCt.CATGGGTTCGAATCCCAT.TCTCATCA tRNA-Leu-AAG-4-1 Sc: 25.8 >>>>.>>>..>>>...............<<<.>>>>>...................................................................................................................................................<<<<<..>>>............<<<....>>>>>.......<<<<<.<<<<<<<. AGGTgGGATGGCCGAGT..GGTt.A..AGGCGGTAGGATGAGG............................................................................................................................................TCTTATTGTATT..........CGTACt.CGCGGGTTCGAATCCCGC.TCCATCTG tRNA-Leu-GAG-1-1 Sc: 48.3 >>>>.>>>..>>>...............<<<.>>>>>...................................................................................................................................................<<<<<..>>..............<<....>>>>>.......<<<<<.<<<<<<<. GGCA.CTTTGGCCGAGT..GGTt.A..AGGCGCCGTCTTCAGGttcgatcagatcc...............................................................................................................................TGGCGGT.CCGA..........AAGGG..CGTGGGTTCGAATCCCAC.AGGTGTCA tRNA-Leu-CAG-1-1 Sc: 60.0 >>>>.>>>..>>>>.............<<<<.>>>>>...................................................................................................................................................<<<<<..>>..............<<....>>>>>.......<<<<<.<<<<<<<. GGCA.AGATGGCCGAGCaTGGTtcA..TGGCGCTACGTTCAGGgaaatcaattaccttct...........................................................................................................................TCGTAGTGGAGC..........AATCCt.CCTGGGTTCAAATCCCAG.TCTTGTCA tRNA-Leu-CAG-2-1 Sc: 46.5 >>>>.>>>..>.>...............<.<.....>...................................................................................................................................................<............................>>>>>.......<<<<<.<<<<<<<. GGTT.TGATGGTCTAGT...GT..A..TGTCAA.ATCTTGATAaaagatgcgcatcccctcagcctcgatccgagacttgagaaggtcgcattatcattaaaccagaatcaatatgctaatcccacattcagggtatgattctcgcttagggcacaccctgagtttgttaaaagcagcttgcgAG....AG..................Gt.CCCGGGTTCAATCCCCGG.TCAAACCC tRNA-Leu-CAG-3-1 Sc: 21.0 >>>>.>>>..>>>...............<<<.>>>>>...................................................................................................................................................<<<<<..>>>>..........<<<<....>>>>>.......<<<<<.<<<<<<<. GCGA.GTCTGGCCGAGT..GGTt.A..AGGCGTTGTGTTTAGGacagtctgtttcccctgtggagagacgatagaatatccaaaa..................................................................................................CCGCAAT.GGGCATC.......GCCCG..CGTAGGTTCGATCCCTAC.GGCTCGCA tRNA-Leu-TAG-1-1 Sc: 67.3 >>>>.>>>..>>>>.............<<<<..>>>.....................................................................................................................................................<<<.........................>>>>>.......<<<<<.<<<<<<<. GGCG.ACATGGCCGAGT..GGTt.A..TGGCGGTCGGTTCAAGatctctatcttgcctgttaagcgggtttaattcgact.......................................................................................................AACGAAAG....TT............G..CGAGGGTTCGAGTCCCTC.TGTCGTCA tRNA-Leu-CAA-1-1 Sc: 49.3 >>>>.>>>..>>>...............<<<.>>>>>...................................................................................................................................................<<<<<...>>>..........<<<.....>>>>>.......<<<<<.<<<<<<<. GCCA.GGATGGCCGAGT..GGTt.A..AGGCGGTGGTTTTAAGtttcttttgtacttattt..........................................................................................................................CACCACT.ATCG..........CGAGAttCCAGGGTTCGAACCCCTG.TCCTGGCA tRNA-Leu-TAA-1-1 Sc: 59.3 >>>>.>>>..>>>...............<<<.>>>>>...................................................................................................................................................<<<<<..>>>>..........<<<<....>>>>>.......<<<<<.<<<<<<<. GTCC.AAGTGGTGAAAT.TGGTa.A..ACACAACAAACTTAAG............................................................................................................................................CTTTGTT.GACTTC........GGTCG..TGAAGGTTCGATCCCTTT.CTTGGATA tRNA-Leu-TAA-2-1 Sc: 47.7
Lys tRNAs
>>>>>>>..>>>>..............<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTAGCTCAATCGGT.A.....GAGCGTGAGACTCTTAcaagcttgcaagaaacccctaATCTCAAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-1-1 Sc: 77.9 GCCTGGTTAGCTCAATCGGT.A.....GAGCGTGAGACTCTTAcgagagtacaacc........ATCTCAAG...........GcTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-2-1 Sc: 76.7 GCCTGGTTAGCTCAATCGGT.A.....GAGCGTGAGACTCTTAcgagagtacaacc........ATCTCAAG...........GcTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-2-2 Sc: 76.7 GCCTGGTTAGCTCAATCGGT.A.....GAGCGTGAGACTCTTAcgagaccagaacc........ATCTCAAG...........GcTACGGGTTCGACCCCCGTATCGGGCT tRNA-Lys-CTT-3-1 Sc: 74.5 >>.>>>>..>>>>..............<<<<..>>>>............................<<<<.................>>>>>.......<<<<<<<<<.<<. TCCCCTGTGGCTCAGATGGCtAgagc.GAGCGTTGCACTCTTA.....................ATGCGTAG...........GtTGGAAGTTCGAGCCTTCCTGGGCGAG tRNA-Lys-CTT-4-1 Sc: 40.6 >>>>>>>..>>>>..............<<<<..>>>>............................<<<<.................>>>>>.......<<<<<<<<<<<<. GGGATTTTAGTATAAC.GGTgA.....ATGCATATGACTTTTA.....................ATCATCAA...........AaTGTAGGTTCGATTCCTACAAATCCTA tRNA-Lys-TTT-1-1 Sc: 44.8
Met tRNAs
>>>>>>>..>>>............<<<.>>>>...............................................................<<<<..................>>>>>.......<<<<<.<<<<<<<. GCCTTCGTGGCGTAGTTGGTtA.CCGCGTTGGTCTCATAtaagggcagtcgattcgacagctgatttatatgacccagtcattagactgagacATCCAAAG.............GtCATGAGTTCGAGTCTCAT.CGAGGGCA tRNA-Met-CAT-1-1 Sc: 67.2 >>>>>>>..>>>>..........<<<<.>>>>>.............................................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. AGCAATTTGGCGCAGT.GGA.A.GCGCGCCGGGCTCATA......................................................ACCCGGAG.............GtCGCACGATCGAAACGTGC.AATTGCTA tRNA-iMet-CAT-1-1 Sc: 64.9 >>>>>>>..>>.>..........<.<<.>>>>>.............................................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. AGCAACATAGCCCAGT.GGA.A.GAGCGACGGGCTCATA......................................................ACCCGTAG.............GtCCCTGGATCGAGACCAGG.TGTTGCTA tRNA-iMet-CAT-3-1 Sc: 63.4 >>>>>>>..>>>>..........<<<<.>>>>>.............................................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. AGCAACGTAGCTCAGG.GGA.A.GAGCGGCGGGCTCATA......................................................ACCCGCAG.............GtCCCTGGATCGAGACCAGG.TGTTGCTA tRNA-iMet-CAT-2-1 Sc: 60.5 >>>.>>>..>>>>..........<<<<.>>>>...............................................................<<<<..................>>>>>.......<<<<<.<<<.<<<. GCCCCCATGGTCTAGCTGGTtA.GGGCATCGGTCTCATAacgtttagattatgatctagtctgcagattagac....................ATCCGAAA.............AtCGTGGGTTCGATCCCCAC.TGGAGGCA tRNA-Met-CAT-2-1 Sc: 60.5 >>>>>>>..>>>>..........<<<<.>>>>>.............................................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GCCTGAGTAGTTCAAC.GGTtA.GAACACTGATCTCATA......................................................CATTGGTA.............A.TAAGAGTTCGATTCTCTT.CTCAGGCT tRNA-Met-CAT-3-1 Sc: 47.6 GGGGTTATAGCTTAATCGGT.A.AAGCATACTGCTCATA......................................................ACAGTAC.TT...........A.TAAGTGTTCAATTCACTT.TAGCCCTA tRNA-Met-CAT-4-1 Sc: 39.9
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGGCCATAGATTAGCTGGGAGATCGTCAGACTGAAGtccaacttcattcctacggaattagatacctATCTGAAG...........GtCGTGTGTTCGAGTCACACTGGCCGCA tRNA-Phe-GAA-1-1 Sc: 63.2 GCGGCCATAGATTAGCTGGGAGATCGTCAGACTGAAGtccaacttcaatcctacggatttagatacctATCTGAAG...........GtCGTGTGTTCGAGTCACACTGGCCGCA tRNA-Phe-GAA-1-2 Sc: 63.2 GCGGCCATAGATTAGCTGGGAGATCGTCAGACTGAAGttcaacttcaatcctacgggttagatacct.ATCTGAAG...........GtCGTGTGTTCGAGTCACACTGGCCGCA tRNA-Phe-GAA-1-3 Sc: 63.2 GCGGCCATAGATTAGCTGGGAGATCGTCAGACTGAAGtccaacttcaatcctacggatttagatacctATCTGAAG...........GtCGTGTGTTCGAGTCACACTGGCCGCA tRNA-Phe-GAA-1-4 Sc: 63.2 GCTTGTGAAGCTCAATTGGTTGAGCGAAATATTGAAG...............................CTATTTAG...........GtTGTAAGTTCGAATCTTATCACGAGCA tRNA-Phe-GAA-2-1 Sc: 50.0
Pro tRNAs
>>>>>>>...>.>........<.<...>>>.................................................................................<<<.................>>>>>.......<<<<<<<<<<<<. GGTTTGGTGGTCTAGTGTAA.GTAAAATCGACCTTGAgtcaacacgatcagcggctaataaccatccagggtatgattctcgcttagggccttcaccctgagtcaaataTGCGAGAG...........GtCCCGGGTTCAATCCCCGGCCAGACCC tRNA-Pro-AGG-1-1 Sc: 36.2 >>>>>>>..>>>..........<<<.>>>>>...............................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTTTGGTGGCCAAGTGGTA.AGGCGTCGCACTCGGTaggtcccgcctcaatctggctccccacagcagaattatcaactaacaattatccagta..............ATGCGAAG...........AtCGGGGGTTCGATTCCCCTCCGAAGCA tRNA-Pro-CGG-1-1 Sc: 60.8 >>>>>>>..>>>..........<<<.>>>>>...............................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTGATGGTCTAGCGGTA.TGATTCTCGCTTTGGG........................................................................TGTGAGAG...........GtCCCGGGTTCAATCCCCGGTCAGGCCC tRNA-Pro-TGG-1-1 Sc: 69.7 GCTTTGGTGGCCAAGTGGTA.AGGCGTCGCACTTGGTtagtagctctgatctgccactgtacattcccaaatcccattctaacaactcgaaaagta.............ATGCGAAG...........AcCGTGGGTTCGAATCCCATCCGAAGCA tRNA-Pro-TGG-2-1 Sc: 62.4
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>........................................<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCGTGTTGACCGAGTGGCccA.AGGTGTGCGACTAGAAcagattgggaa......................ATCGCAT.GGGT.TC........GCCCG.CGTAGGTTCGAATCCTGC.ACACGTCG tRNA-Ser-AGA-2-1 Sc: 62.9 GGCGTGTTGACCGAGTGGCccA.AGGTGTGCGACTAGAAcgaattgggaa......................ATCGCAT.GGGT.TC........GCCCG.CGTAGGTTCGAATCCTGC.ACACGTCG tRNA-Ser-AGA-2-2 Sc: 62.9 GGCGTGTTGACCGAGTGGCccA.AGGTGCATGACTAGAAgaagcaagag.......................ATCATGT.GGGT.TC........GCCCG.CGTAGGTTCGAATCCTGC.ACACGTCG tRNA-Ser-AGA-1-1 Sc: 62.2 >>>>>>>..>>>............<<<.>>>>>........................................<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCAGAGTGCCCGAGTGGTt.A.AGGGGTTGCACTCGAAagaacggtgggtccaacccatcagaatctcat.ATGCAAT.ACGT.TC........GCGTG.CGCAGGTTCGAATCCTGT.CTCTGTCG tRNA-Ser-CGA-1-1 Sc: 61.6 GGCAGAGTGCCCGAGTGGCccA.AGGGGTTGCACTCGAAagaacggtgggaccatcccattagtatcttgatATGCAAT.ACGT.TC........GCGTG.CGCAGGTTCGAATCCTGT.CTCTGTCG tRNA-Ser-CGA-2-1 Sc: 55.5 >>>>>>>..>>>............<<<.>>>>>........................................<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<. GGTAGTATGCCGGAGTGGTt.A.ACGGGTAGAATTTGAAcctctttctcaagcc..................ATTCTATGGGTT...........CGCCCtCGCAGGTTCGAATCCTGC.TACTATCG tRNA-Ser-TGA-1-1 Sc: 55.0 >>>>>>>..>>>............<<<.>>>>>........................................<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<. AGAGAATTGGCCGAGTGGTttA.AGGCGATAAGTTTGAG.................................TTTTATT.AGGTGATA......AACCTG.CATCCGTTCGAATCGGAT.ATTCTCTG tRNA-Ser-TGA-2-1 Sc: 40.6 >>>>>>>..>>>............<<<.>>>>>........................................<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<. GTCACTTTGGCCGAGTGGTt.A.AGGCGGTGCCCTGCTA.................................AGGCATT.ACGT.TC........GCGTG.CGTAGGTTCGAATCCTGC.AGGTGACG tRNA-Ser-GCT-1-1 Sc: 69.9
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>...............<<<<.>>>>>....................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTGGCTAAGTGGT.......A.TAGCGTCTCACTAGTAttaatacggtgaaATGAGAAG...........AtCATGAGTTCGATTCTCATACTGGGCT tRNA-Thr-AGT-1-1 Sc: 65.7 GCCCGGTTGGCTAAGTGGT.......A.TAGCGTCTCACTAGTAttaatacggtgacATGAGAAG...........AtCATGAGTTCGATTCTCATACTGGGCT tRNA-Thr-AGT-1-2 Sc: 65.7 GCCCGGTTGGCTAAGTGGT.......A.TAGCGTCTCACTAGTAtttatacagtgacATGAGAAG...........AtCATGAGTTCGATTCTCATACTGGGCT tRNA-Thr-AGT-1-3 Sc: 65.7 >>>>>>>...>...................<...>>>>....................<<<<.................>>>>>.......<<<<<<<<<<<<. GCCTCCGTGGTATAGTGGTtctgtgt..TAAGGAGTGCCGTGTGggtt.........AGCACATG...........GgTGCTGGTTCGAATCCAGCTGGAGGCA tRNA-Thr-TGT-2-1 Sc: 32.5 >>>>>>>..>>>>...............<<<<.>>>>......................<<<<................>>>>>.......<<<<<<<<<<<<. GCCTGATTAGCATAAAAGT.......A.ATGCAATTGTTTTGTA.............ATCAATAG...........A.AGCAAGTGCGATACTTGCATTGGGCT tRNA-Thr-TGT-1-1 Sc: 30.4
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>......................................................................<<<<....................>>>>>.......<<<<<<<<<<<<. GGACCCATGGCGCAACGGTA.GCGCGTCAGATTCCAGtactcatggtatc................................................TCCTGAAG...............GtTAGGCGTTCGAATCGCCTTGGGTTCA tRNA-Trp-CCA-1-1 Sc: 54.5 >>>>>>>..>>>>........<<<<.>.>>>....................................................................<<<.<..>.>.........<.<...>>>>>.......<<<<<<<<<<<<. GGACCCATGGCGCAACGGTA.GCGCGTCAGATTCCAGttcttggaactacctgaaggtgtatgtctactcatcttggctcctcttgcgacagcgcaatATCTAACATTCA.......AGCAG.TAAGCGTTCGAATCGCTTTGGGTTCA tRNA-Trp-CCA-2-1 Sc: 37.3
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. CTCTGAGTGGTCTAGTTGGTtcATGGCGTTCGACTGTAAttgattaattgtc..ATCGAAAA...........GtCGGCGGTTCGATTCCGTCCTCGGAGA tRNA-Tyr-GTA-1-1 Sc: 59.7 CTCTGAGTGGTCTAGTTGGTtcATGGCGTTCGACTGTAAttgataaattgtc..ATCGAAAA...........GtCGGCGGTTCGATTCCGTCCTCGGAGA tRNA-Tyr-GTA-1-2 Sc: 59.7 CTCGGAGTGGTCTAGTTGGTtcATGGCGTCCGACTGTAAttgtgcaagattgtcATCGGAAA...........GtCGGCGGTTCGATTCCGTCCTCTGAGA tRNA-Tyr-GTA-2-1 Sc: 57.9
Val tRNAs
>>>>>>>..>>>............<<<.....>>>>.................................................................................<<<<.................>>>>>.......<<<<<.<<<<<<<. GGTCCCGTGGTCTAGCTGGTtA.TGGCA...CCTCGT.TAACA.........................................................................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGG.CGGGACCT tRNA-Val-AAC-1-1 Sc: 65.1 GGTCGCGTGGTCTAGCTGGTtA.TGGCA...CCTCGT.TAACA.........................................................................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGG.CGTGACCT tRNA-Val-AAC-2-1 Sc: 63.5 GGTCGCGTGGTCTAGCTGGTtA.TGGCA...CCTCGT.TAACA.........................................................................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGG.CGTGACCT tRNA-Val-AAC-2-2 Sc: 63.5 GGTCGCGTGGTCTAGCTGGTtA.TGGCA...CCTCGT.TAACA.........................................................................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGG.CGTGACCT tRNA-Val-AAC-2-3 Sc: 63.5 >>>>>>>..>>>>..........<<<<....>>>.>.................................................................................<.<<<................>>>>>.......<<<<<.<<<<<<<. TCCCCTGTAGCTCAGTTGGCtA.GAGCG...TCGTACgTCTGAcaccacaggatccgctccatttgctctgttaatgctaacaatcattcaagagactgtta..............ATCTGAAG...........GtCGCAAGTTCAAACCTTGT.CGGGGGAG tRNA-Val-GAC-1-1 Sc: 46.7 >>>>>>>..>>.>..........<.<<....>>>>>.................................................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGTCGAATAGTATAGT.GGTtA.ACACG...CCAGTC.TCACA.........................................................................CACTGGA............GtCCCGGGTTCAATTCCCGG.TTTGACCT tRNA-Val-CAC-1-1 Sc: 69.9 >>>>>>>...>>>..........<<<.....>>>>>.................................................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGTTCGGTGGTCTAGT.GGGtA.AGAAAcatTTCGTT.CCACAtcaatattccaccaattgtactaacaaacattagtatgattctcgcttagggtccaccctaagtttaacagctTGCGAGAG...........GtCCCGGGTTCAATCCCCGG.CCGAACCC tRNA-Val-CAC-2-1 Sc: 36.7 >>>>>>>..>>>............<<<....>>>>>.................................................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGTCGTGTAGCGTAGT.GGTtA.TCGCG...TTTCGT.TTACAgttatcacctccat...........................................................CCGAAAAG...........GtCGCAGGTTCGAACCCTGC.CACGATCA tRNA-Val-TAC-1-1 Sc: 72.2 >>>>>>>..>>>>..........<<<<....>>>>>.................................................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GAGGAATTAGTTCAAT.GGT.A.GAGCG...TTTGTT.TTACA.........................................................................CACAAAAA...........GtTGTAGGTTCGAGTCCTGC.ATTCCTTA tRNA-Val-TAC-2-1 Sc: 55.6