tRNA Gene Summary

Overview
High confidence set 706
tRNAs decoding standard 20 AA 706
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 17
Unexpected anticodons 2
Non-canonical anticodon loop length 2
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 83
Secondary filter (low feature scores, possible rep. element) 77

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 37)
Leu CAA
12
Ile TAT
4
Tyr GTA
21
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
28
GGC
 
CGC
6
TGC
13
47
GlyACC
 
GCC
24
CCC
 
TCC
46
70
ProAGG
7
GGG
 
CGG
5
TGG
39
51
ThrAGT
18
GGT
 
CGT
6
TGT
10
34
ValAAC
27
GAC
 
CAC
8
TAC
4
39
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
15
GGA
 
CGA
5
TGA
10
ACT
 
GCT
9
 
 
 
 
39
ArgACG
23
GCG
 
CCG
 
TCG
11
 
 
 
 
CCT
3
TCT
11
48
LeuAAG
23
GAG
 
CAG
3
TAG
6
 
 
 
 
CAA
12
TAA
4
48
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
18
 
 
 
 
18
AsnATT
 
GTT
23
 
 
 
 
23
Lys 
 
 
 
CTT
33
TTT
19
52
AspATC
 
GTC
35
 
 
 
 
35
Glu 
 
 
 
CTC
23
TTC
23
46
HisATG
 
GTG
21
 
 
 
 
21
Gln 
 
 
 
CTG
9
TTG
23
32
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
25
GAT
 
CAT
 
TAT
4
29
iMet/Met 
 
 
 
CAT
12/12
 
 
24
TyrATA
 
GTA
21
 
 
 
 
21
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
14
 
 
 
 
14
Trp 
 
 
 
CCA
15
 
 
15
SelCys 
 
 
 
 
 
TCA
 
0