tRNA Gene Summary

Overview
High confidence set 706
tRNAs decoding standard 20 AA 706
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 17
Unexpected anticodons 2
Non-canonical anticodon loop length 2
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 83
Secondary filter (low feature scores, possible rep. element) 77

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 50)
Ala GGC
1
Gly GCC
1
Pro AGG
7
Leu CAA
13
Gln CTG
1
Ile TAT
4
Tyr GTA
22
Supres TTA
1
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
30
GGC
2
CGC
7
TGC
13
52
GlyACC
3
GCC
32
CCC
7
TCC
49
91
ProAGG
14
GGG
2
CGG
7
TGG
42
65
ThrAGT
21
GGT
 
CGT
7
TGT
11
39
ValAAC
29
GAC
 
CAC
12
TAC
5
46
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
15
GGA
 
CGA
9
TGA
10
ACT
 
GCT
10
 
 
 
 
44
ArgACG
31
GCG
 
CCG
2
TCG
11
 
 
 
 
CCT
5
TCT
14
63
LeuAAG
26
GAG
1
CAG
4
TAG
8
 
 
 
 
CAA
14
TAA
6
59
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
18
 
 
 
 
18
AsnATT
3
GTT
25
 
 
 
 
28
Lys 
 
 
 
CTT
45
TTT
22
67
AspATC
8
GTC
43
 
 
 
 
51
Glu 
 
 
 
CTC
28
TTC
25
53
HisATG
4
GTG
25
 
 
 
 
29
Gln 
 
 
 
CTG
12
TTG
26
38
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
25
GAT
3
CAT
 
TAT
14
42
iMet/Met 
 
 
 
CAT
12/15
 
 
27
TyrATA
 
GTA
22
 
 
 
 
22
Supres 
 
TCA
 
CTA
 
TTA
2
2
CysACA
 
GCA
16
 
 
 
 
16
Trp 
 
 
 
CCA
17
 
 
17
SelCys 
 
 
 
 
 
TCA
 
0