Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>.>..>>>>.........<<<<.>>>>>..............................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAtcttctaatcaaaagattc....TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-2 Sc: 53.5 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAtcttcttttctaaagattc....TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-3 Sc: 53.5 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAtcttcagttataggttct.....TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-7 Sc: 53.5 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAtctttcgtaatagattctgat..TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-1 Sc: 53.4 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAttttatctcaagttaagattc..TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-5 Sc: 53.4 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAttttatctcaagttaagattc..TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-6 Sc: 53.4 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAttttattccaatcttaagatcatTTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-4 Sc: 53.3 >>>>>.>..>>>>.........<<<<.>>>>>..............................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGGTGTGGTCAAGG.GGTA.TGACAAGCGATCCGCAtttaggacgctt...........TTCGCTTA...........G.CCTGGGTTCGAGTCCCAGCTCCTCCA tRNA-Ala-CGC-1-1 Sc: 45.5 GGGGGTGTGGTCAAGG.GGTA.TGACAAGCGATCCGCAtttaggacgctt...........TTCGCTTA...........G.CCTGGGTTCGAGTCCCAGCTCCTCCA tRNA-Ala-CGC-1-2 Sc: 45.5 >>>>>.>..>>>>.........<<<<.>>>>>..............................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGGTGTAGCTCACTTGGTA.GAGCGCGTCATTTGCActgtcgaatacagtaggac....TTGACGAG...........GtACTGAGTTCGATCCTCAGCTCCTCCA tRNA-Ala-TGC-1-1 Sc: 55.3
Arg tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTCCGCGTAGCACAGTGGT.A.GTGCGCTTGACTACGAttcctctttctggatccga........ATCAAGAG...........GtCGCGATTTCGAATATCGCCGTGGATT tRNA-Arg-ACG-1-1 Sc: 65.2 GTCCGCGTAGCACAGTGGT.A.GTGCGCTTGACTACGAtttcgtcattaattctgataaatcggcATCAAGAG...........GtCGCGATTTCGAATATCGCCGTGGATT tRNA-Arg-ACG-1-2 Sc: 64.9 >>>>>>>..>>>>.........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTTCGCATGGTGCAGTGGT.A.GCATATCGCTTTCCGGtggtggtt...................CGGCGAAG...........AtCATGGGTTCGAACCCCATTGCGAATT tRNA-Arg-CCG-1-1 Sc: 55.1 >>>>>>>...>>>.........<<<..>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt.........ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-1 Sc: 55.9 GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt.........ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-2 Sc: 55.9 GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt.........ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-3 Sc: 55.9 GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt.........ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-4 Sc: 55.9 GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt.........ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-5 Sc: 55.9 >>>>>>>..>>>...........<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGGCGTGGCCAAATGGTtA.CGGCGTCCGCTTCCTAttaaacgattatcaaatcatccggt..AGCGGGAG...........AtTGTGGGTTCGATCCCCACCGTTGGTT tRNA-Arg-CCT-1-2 Sc: 57.3 GCCGGCGTGGCCAAATGGTtA.CGGCGTCCGCTTCCTAttaattgatcatcaaatcagccggt..AGCGGGAG...........AtTGTGGGTTCGATCCCCACCGTTGGTT tRNA-Arg-CCT-1-3 Sc: 57.3 GCCGGCGTGGCCAAATGGTtA.CGGCGTCCGCTTCCTAtgacaatcagttaacatctgatccgaaAGCGGGAG...........AtTGTGGGTTCGATCCCCACCGTTGGTT tRNA-Arg-CCT-1-1 Sc: 57.2 >>>>>.>..>>>>.........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<.<<<<<. GCCCGTGTGGCCTAATGGTtA.AGGCTTCTGACTTCTAggttacgcaagtgact...........ATCAGAGG...........AtTGTGGGTTCGAGTCCCACCTTGGGCT tRNA-Arg-TCT-1-1 Sc: 67.6
Asn tRNAs
>>>>>>>..>>>>.........<<<<..>>>>.......................................................<<<<.................>>>>>.......<<<<<<<<<<<<. TGCCCCGTGGCTGAGTTGGTtACAGCGGTTGACTGTTAttaattacgtaataata...............................ATCAGACG...........GtCCAGAGTTCGAGTCTCTGCGGGGCAG tRNA-Asn-GTT-2-1 Sc: 56.0 TGCCCCGTGGCTGAGTTGGTtACAGCGGTTGACTGTTAattgatcatcctcaataaggatgattatgtaataatg...........ATCAGACG...........GtCGAGAGTTCGAGTCTCTCCGGGGCAG tRNA-Asn-GTT-1-1 Sc: 55.6 TGCCCCGTGGCTGAGTTGGTtACAGCGGTTGACTGTTAtttaaaaatcattaattagattaattaatgtctattacgtaatag...ATCAGACG...........GtCGAGAGTTCGAGTCTCTCCGGGGCAG tRNA-Asn-GTT-1-2 Sc: 55.4 TGCCCCGTGGCTGAGTTGGTtACAGCGGTTGACTGTTAgtaaagaaatccttaattaatataattaaagataattacgtaataatgATCAGACG...........GtCGAGAGTTCGAGTCTCTCCGGGGCAG tRNA-Asn-GTT-1-3 Sc: 55.2
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TTTCTGTTCGTATAACGGCtA.GTATGCTCGCTTGTCActggaggattcagttccgcagcgtcCGCGGGAG...........ATCGGAGTTCGATTCTCCGACAGGAAG tRNA-Asp-GTC-1-1 Sc: 31.8
Cys tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GTGGGAGTAGCTCAGTTttGGTtAGAGCAACCGATTGCAAttttatatcgcaatcATCGGTAG...........GtCGTGGGTTCGAATCCCACTTCCCACT tRNA-Cys-GCA-1-1 Sc: 69.5 GTGGGAGTAGCTCAGTTttGGTtAGAGCAACCGATTGCAAttatttgcaact...ATCGGTAG...........GtCGTGGGTTCGAATCCCATTTCCCACT tRNA-Cys-GCA-2-1 Sc: 66.1 GTGGGAGTAGCTCAGTTttGGTtAGAGCAACCGATTGCAAttttattcgcaatc.ATCGGTAG...........GtCGTGGGTTCGAATCCCATTTCCCACT tRNA-Cys-GCA-2-2 Sc: 66.0
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGCTTCTTAGTATAACGGTtA.GTACATGAGATTCTGA................................TTCTCGTG...........ACCTGGGTTCGACTCCCAGAGAGGCCT tRNA-Gln-CTG-1-1 Sc: 63.8 GGCTTCTTAGTATAACGGTtA.GTACATGAGATTCTGA................................TTCTCGTG...........ACCTGGGTTCGACTCCCAGAGAGGCCT tRNA-Gln-CTG-1-2 Sc: 63.8 GGCTTCTTAGTATAACGGTtA.GTACATGAGATTCTGA................................TTCTCGTG...........ACCTGGGTTCGACTCCCAGAGAGGCCT tRNA-Gln-CTG-1-3 Sc: 63.8 >>>>.>>..>>>>.........<<<<.>>>>>.......................................<<<<<...............>>>>>.......<<<<<<<.<<<<. GGCGACATCGTCTAGTGGTtA.GGACGTTCGGTTTTGAagggttgcgtggtcttccgcctatttcaactgTCCGAACG...........ACCTGGGTTCGAACCCCAGTGACGCCT tRNA-Gln-TTG-1-1 Sc: 55.2 GGCGATATCGTCTAGTGGTtA.GGACGTTCGGTTTTGAtgtcatcatt......................TCCGAGCA...........ACCTGGGTTCGATCCCCAGTAGCGCCT tRNA-Gln-TTG-2-1 Sc: 49.9
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTCAGTAGTATAACGGTtA.GTATAACCGCTTCTCAgattttaagtaactcttgtttctgtt.CGCGGTAG...........ACCAGGGTTCAACTCCCTGCTGGAGAA tRNA-Glu-CTC-1-1 Sc: 48.5 TCTTCAGTAGTATAACGGTtA.GTATAACCGCTTCTCAgtttccgagaaatactcggtttctgtcCGCGGTAG...........ACCAGGGTTCAACTCCCTGCTGGAGAA tRNA-Glu-CTC-1-2 Sc: 48.5 TCTTCAGTAGTATAACGGTtA.GTATAACCGCTTCTCAtttggagatcaagtatcttctatgaa.CGCGGTAG...........ACCAGGGTTCAACTCCCTGCTGGAGAA tRNA-Glu-CTC-1-3 Sc: 48.5 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtacctagtttttctagtctgtt....CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-1 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtgattggatttatccagttctgtt..CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-3 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtaattggatttatcccgtactgtt..CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-4 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtatttgatccgtcaaaactgtt....CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-5 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtatttgatccgtcaaaactgct....CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-6 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtgattggattttatccagttccgtt.CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-2 Sc: 46.9 >>>>>>>..>>>>.........<<<<.>>>>>..................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTCGATAGTACAGGGGTtA.GTATATCCGCTTTTCAggaactcaacttcccacgg........CGCGGACG...........ACCCGGGTTCGAATCCCGGTCGGAGAA tRNA-Glu-TTC-2-1 Sc: 59.2 TCTTCGATAGTACAGGGGTtA.GTATATCCGCTTTTCAggaaactcaactttccacgg.......CGCGGACG...........ACCCGGGTTCGATTCCCGGTCGGAGAA tRNA-Glu-TTC-1-1 Sc: 59.1 TCTTCGATAGTACAGGGGTtA.GTATATCCGCTTTTCAggaactgaattcctacaattccta...CGCGGACG...........ACCCGGGTTCGAATCCCGGTCGGAGAA tRNA-Glu-TTC-2-2 Sc: 59.0
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-2 Sc: 48.5 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-3 Sc: 48.5 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-8 Sc: 48.5 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-9 Sc: 48.5 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCAttaggtgattt..............................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-4 Sc: 41.2 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCAttaggtgattt..............................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-5 Sc: 41.2 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCAtttggctactt..............................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-6 Sc: 41.2 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCAttaggtgaatt..............................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-7 Sc: 41.2 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCAtctgagttatcagggaatgaaaa..................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-1 Sc: 40.7 >>>>>>>..>>>>.........<<<<.>>>>>................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. ACGCTGTTGGTGTATTGGT.A.ACATTAGAGCTTCCCAttgtcgccagtggccgtctgcgggcggataat.........TGCTCTAG...........CACGGGGTTCGATTCCCCGACAGCGTA tRNA-Gly-CCC-1-2 Sc: 42.0 ACGCTGTTGGTGTATTGGT.A.ACATTAGAGCTTCCCAttatctgattaatggccactttgtatttaatggtggacaatTGCTCTAG...........CACGGGGTTCGATTCCCCGACAGCGTA tRNA-Gly-CCC-1-1 Sc: 41.7 >>>>>>>..>>>>.........<<<<.>>>>>................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGCTAATCGTCTAGTGGTtA.GGATGGCTCCCTTCCA.........................................AGGAGTCG...........ACCGGCGTTCGAATCGCCGTTGGCGCA tRNA-Gly-TCC-1-1 Sc: 56.3 GCGCTAATCGTCTAGTGGTtA.GGATGGCTCCCTTCCA.........................................AGGAGTCG...........ACCGGCGTTCGAATCGCCGTTGGCGCA tRNA-Gly-TCC-1-3 Sc: 56.3 GCGCTAATCGTCTAGTGGTtA.GGATGGCTCCCTTCCAtgagttca.................................AGGAGTCG...........ACCGGCGTTCGAATCGCCGTTGGCGCA tRNA-Gly-TCC-1-2 Sc: 49.1
His tRNAs
>>>>>>>..>>>...........<<<.>>>>>.................<<<<<...............>>>>>.......<<<<<<<<<<<<. GTCCCTATAGTCTAGTGGTtA.TGACGTAACATTGTGG..........CTGTTGAG...........GCGCCTGTTCGATTCAGGCTAGGGACA tRNA-His-GTG-1-1 Sc: 70.0 GTCCCTATAGTCTAGTGGTtA.TGACGTAACATTGTGG..........CTGTTGAG...........GCGCCTGTTCGATTCAGGCTAGGGACA tRNA-His-GTG-1-2 Sc: 70.0 GTCCCTATAGTCTAGTGGTtA.TGACGTAACATTGTGGagtttgagatCTGTTGAG...........GCGCCTGTTCGATTCAGGCTAGGGACA tRNA-His-GTG-1-3 Sc: 62.7
Ile tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAattattaagttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-2 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAaataaaaagttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-3 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAattattgaattatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-4 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAattattgagttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-5 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAgttattaagttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-6 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAataaaaacttgttatt.ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-1 Sc: 51.8 >>>>>>>..>>>>...........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. TTCCCGTTAACTCAGT.GGTc.A.GAGTAGTGTGCTTATGaggatacagttttattgTCACACCG...........GtCGTGGGTTCAACTCCCACACGGGAAA tRNA-Ile-TAT-1-1 Sc: 54.8
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......................................<<<<<.>>>..............<<<..>>>>>.......<<<<<.<<<<<<<. GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtaatcgagtattacgtaagaaa..........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-1 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtaatcgagtattacgtaagaat..........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-2 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtgttgttcaacactgaaagcc...........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-3 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtgttgttcaacactgaaagcc...........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-4 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtgttgttcgacactgaaagcc...........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-5 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtaatcgagtattacgtaagaat..........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-6 Sc: 51.9 >>>>>>>..>>>>..........<<<<.>>>>>.......................................<<<<<.>>................<<..>>>>>.......<<<<<.<<<<<<<. GGCGAAGTGTCCGAGTGGTt.A.TGGAGTGTCGTTCAGGtgtgaaacg.......................CCGGCATGC....TTT.........GCGCGTGGGTTCGAATCCCAC.CTTCGTCA tRNA-Leu-CAG-1-1 Sc: 50.8 >>>>>>>..>>>............<<<.>>>>.........................................<<<<.>>.>............<.<<..>>>>>.......<<<<<.<<<<<<<. GGACAGATGCCCGAGCGGTt.A.AGGGGACGGTCTCAAGtggaatacactttccctgataagggttgaa..ATCCGTTGCGT............AAGCGCGTGAGTTCGAATCTCAC.TCTGTTCA tRNA-Leu-CAA-1-1 Sc: 54.7 GGACAGATGCCCGAGCGGTt.A.AGGGGACGGTCTCAAGtggaatacactttccctgataagggttgaa..ATCCGTTGCGT............AAGCGCGTGAGTTCGAATCTCAC.TCTGTTCA tRNA-Leu-CAA-1-3 Sc: 54.7 GGACAGATGCCCGAGCGGTt.A.AGGGGACGGTCTCAAGtgggatacactttccctgataatggggttgaaATCCGTTGCGT............AAGCGCGTGAGTTCGAATCTCAC.TCTGTTCA tRNA-Leu-CAA-1-2 Sc: 54.6 >>>>>>>..>>>............<<<.>>>>.........................................<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<. GCGGTGTTGACCGAGTGGTt.A.AGGTGTCGGCCTTAAGctagcttcttttgta.................ATCCGATGGTCGA........GAGACCGCGTGAGTTCGAACCTCAC.ACACCGCA tRNA-Leu-TAA-1-1 Sc: 59.0
Lys tRNAs
>>>.>>>..>>>>.........<<<<.>>>>>.....................................................<<<<<................>>>>>.......<<<<<<<<.<<<. GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-1 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-2 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-3 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-5 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-6 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-7 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAacgagtctgcttgaaccggttatgggccatcaatcattcattcgtcATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-4 Sc: 71.5 >>>>>>>..>>>>.........<<<<.>>>>>.....................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTTCGTAGCTGAGTTGGTtACAGCGTCCGACTTTTAagctttcacaagcttat.............................ATCGGGCG...........AtCACGGGTTCGAGCCCCGTCGAAGGCT tRNA-Lys-TTT-1-1 Sc: 68.4
Met tRNAs
>>>>>>>..>>>>........<<<<..>>>...................................<<<.................>>>>>.......<<<<<<<<<<<<. GCCCTCATGGTGTAGTGGTA.ACACGAAGGTCTCATAatatgacgttagcttagttaacggtaATCCTCAG...........C.TCTGAGTTCGATTCTCAGTGAGGGCA tRNA-Met-CAT-1-1 Sc: 59.9 GCCCTCATGGTGTAGTGGTA.ACACGAAGGTCTCATAatatgacgttagcttagttaacggtaATCCTCAG...........C.TCTGAGTTCGATTCTCAGTGAGGGCA tRNA-Met-CAT-1-2 Sc: 59.9 GCCCTCATGGTGTAGTGGTA.ACACGAAGGTCTCATAatatgacgttagcttggttaacggtaATCCTCAG...........C.TCTGAGTTCGATTCTCAGTGAGGGCA tRNA-Met-CAT-1-3 Sc: 59.9 >>>>>>>..>>>>........<<<<.>>>>>.................................<<<<<................>>>>>.......<<<<<<<<<<<<. AACAGCGTAATTCAGAGGAA.GAATGCAAGGCTCATAtttactttggt...............ACCTTGAA...........GtCGCTGGATCGAAACCAGCCGCTGTTA tRNA-iMet-CAT-1-1 Sc: 45.4 AACAGCGTAATTCAGAGGAA.GAATGCAAGGCTCATAtttacttgggt...............ACCTTGAA...........GtCGCTGGATCGAAACCAGCCGCTGTTA tRNA-iMet-CAT-1-2 Sc: 45.4 AACAGCGTAATTCAGAGGAA.GAATGCAAGGCTCATAattatttgttt...............ACCTTGAA...........GtCGCTGGATCGAAACCAGCCGCTGTTA tRNA-iMet-CAT-1-3 Sc: 45.4
Phe tRNAs
>>>>.>>..>>>>........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<.<<<<. GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcagtgaagaatcaa....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-1 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcatcaagaatcaa.....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-3 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcatcaggaatcaa.....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-4 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcattgagaatcaa.....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-5 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttccgtaactcgagatttcaATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-2 Sc: 67.2
Pro tRNAs
>>>>>>>..>>>>........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggatttcgaaatccggctt...............TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-1 Sc: 53.7 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattatgtaatccggctt...............TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-2 Sc: 53.7 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattatgtaatccggctt...............TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-5 Sc: 53.7 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattatgtaatccggctt...............TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-6 Sc: 53.7 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattacataaagttctccggctt..........TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-3 Sc: 53.6 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattacataaagttttccggctt..........TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-4 Sc: 53.6 >>>>>>>..>>>>........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTAATAGTGTAATCGTC.GCACGCATCCTTCGGGatcgttagtcttcccgcagcttaacgttgcataattTGGATGTA...........G.TCTGGGTTCAATTCCCAGTTGGGCCC tRNA-Pro-CGG-1-1 Sc: 34.2 >>>>>.>..>>>..........<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGTTTGTAGTGTAGTGGTA.TCGCGCTTCATTTGGGcttcacggagcaccg.....................TTGAAGAG...........GtCCCGCGTTCGATCCGCGGCTGACCCC tRNA-Pro-TGG-1-1 Sc: 51.5
SeC tRNAs
Ser tRNAs
>>>>>>>...>>>...........<<<.>>>>>................................<<<<<.>>>............<<<..>>>>>.......<<<<<.<<<<<<<. GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAtttccaaattcctc...........ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-1 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttcagatattcctc...........ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-2 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttatgaaattcctc...........ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-3 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttatgaaattcctc...........ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-4 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttatgaaattcctc...........ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-5 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttatgaaattcctc...........ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-6 Sc: 45.1 >>>>>>>...>>>...........<<<.>>>>>................................<<<<<.>>>............<<<..>>>>>.......<<<<<.<<<<<<<. GACTTGATGcTCCGAGTGGTtA.AGGGGCGGGACTTGAAtggatcacgtaatccaagaa.....ATCCCGTGTCGA........AAGACGCGCAGGTTCGAACCCTGC.TCAAGTCG tRNA-Ser-TGA-1-1 Sc: 63.0 >>>>>>>...>>>...........<<<.>>>>>................................<<<<<.>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GATACAGTC.GGATAGTGGTtA.TTCCGTCACATTGCTAtggttgctctggtaatcagatgaagATGTGGTGCCT.TC.......GGGCGCGTGAGTTCGAATCTCAC.CTGTGTCA tRNA-Ser-GCT-1-1 Sc: 42.3
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>............<<<.>>>>>...............................<<<<<....................>>>>>.......<<<<<<<<<<<<. GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAaatcgtctagatattgtcta....ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-3 Sc: 57.4 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAagaatagcagttgcatttcacta.ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-4 Sc: 57.3 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAagaatagcaattgcatttcacta.ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-5 Sc: 57.3 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAacaagttgcttaacaacgtaactaATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-1 Sc: 57.2 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAtttagagcgttatttcgcttgctaATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-2 Sc: 57.2 >>>>>.>..>>>>..........<<<<.>>>>>...............................<<<<<....................>>>>>.......<<<<<<.<<<<<. GCCCTTGTAGCTCAGG.GGTtA.GAGTATGGCCTTCGTAgtcaatgcg...............AGGTCAGGTTAGg..........GtCCATGGTTCAAATCCATGCTGGGGCA tRNA-Thr-CGT-1-1 Sc: 50.8 >>>.>>>..>>>............<<<.>>>>>...............................<<<<<....................>>>>>.......<<<<<<<<.<<<. GCCTCGGTAGTTTAGT.GGTtA.TAATTTTTCACTTGTAgcgcatctacatg...........ATGAAAGG...............GtCCTGTGTTCGACTCACAGCCGTGGCA tRNA-Thr-TGT-1-1 Sc: 60.6
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GGAGCTGTAGTTCAATTGGTA.GAACGACGGATTCCAActacttttggttgctATCCGTCG...........GtCGCAGGTTCGATTCCTGTCAGCTTCA tRNA-Trp-CCA-1-1 Sc: 68.7 >>>>>>>..>>>>.........<<<<..>>>>......................<<<<.................>>>>>.......<<<<<<<<<<<<. GGAGTCGTAGTTCAGT.GGTA.GAATATCGGATTCCAAttactggaagt....ATCCGCCG...........GtCGCAGGTTCAATCCCTGTCGACTTCA tRNA-Trp-CCA-2-1 Sc: 58.9 GGAGTCGTAGTTCAGT.GGTA.GAATATCGGATTCCAAttactggaagt....ATCCGCCG...........GtCGCAGGTTCAATCCCTGTCGACTTCA tRNA-Trp-CCA-2-2 Sc: 58.9
Tyr tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>..............................................<<<<<................>>>>>............<<<<<<<.<<<<<. CTCTCCGTAGTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggttacaatatcac.......................ATCTGAAA...........GtCGTGCGTTCGACT.....CGCACCG.GGGAGA tRNA-Tyr-GTA-1-1 Sc: 53.7 CTCTCCGTAGTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggttacaatatcac.......................ATCTGAAA...........GtCGTGCGTTCGACT.....CGCACCG.GGGAGA tRNA-Tyr-GTA-1-2 Sc: 53.7 CTCTCCGTAGTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggtttccaaagtcac......................ATCTGAAA...........GtCGTGCGTTCGACT.....CGCACCG.GGGAGA tRNA-Tyr-GTA-1-3 Sc: 53.7 CTCTCCGTAGTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggttaacaatctcac......................ATCTGAAA...........GtCGTGCGTTCGACT.....CGCACCG.GGGAGA tRNA-Tyr-GTA-1-4 Sc: 53.7 >>>>>.>..>>>>...........<<<<.>>>>>..............................................<<<<<................>>>>>............<<<<<<..<<<<<. TCTCC.GTAGCTTAGTaTGGTttAGAGCGTCAGACTGTAAttgtctacaattatctatattcatctttaagattaggatATCTGAAA...........AtCGTGGGTTTGACTtgactCCCACCCgGGAGAT tRNA-Tyr-GTA-2-1 Sc: 33.6
Val tRNAs
>>>>.>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<.<<<<. GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcaatttgaatgtctt..............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-1 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcatttggaggtttt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-2 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcacttgcaatgtctt..............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-5 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcacacgaatgtctt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-7 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttgttaattaagatgtctt............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-3 Sc: 49.7 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttgttaattaagatgtctt............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-4 Sc: 49.7 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcttaattaagatgtctt............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-6 Sc: 49.7 >>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. ATCTCATTGGCTCAGTTGGTtAGAGTGTTCGCTTCACAtctatgacaggtcataggatctggtgat...CGCGAAAG...........GtCCCCGGTTCGATCCCGGGATGGGATA tRNA-Val-CAC-1-1 Sc: 70.0 ATCTCATTGGCTCAGTTGGTtAGAGTGTTCGCTTCACAtgattacgggttttaactcgtggctgctgaaCGCGAAAG...........GtCCCCGGTTCGATCCCGGGATGGGATA tRNA-Val-CAC-1-2 Sc: 69.9