Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>.>..>>>>.........<<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAtcttctgttataggttct....TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-1 Sc: 53.5 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAtcttcttttctaaagattc...TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-3 Sc: 53.5 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAtcttcaaatcataagattc...TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-4 Sc: 53.5 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAtctttcctaatagatcctgat.TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-2 Sc: 53.4 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAttttatcctatcttaagatcatTTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-5 Sc: 53.4 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAttttatctcaagttaagattc.TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-6 Sc: 53.4 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAttttatctcaagttaagattc.TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-7 Sc: 53.4 >>>>>.>..>>>>.........<<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGGTGTGGTCAAGG.GGTA.TGACAAGCGATCCGCAtttaggacgctt..........TTCGCTTA...........G.CCTGGGTTCGAGTCCCAGCTCCTCCA tRNA-Ala-CGC-1-1 Sc: 45.5 GGGGGTGTGGTCAAGG.GGTA.TGACAAGCGATCCGCAtttaggacgctt..........TTCGCTTA...........G.CCTGGGTTCGAGTCCCAGCTCCTCCA tRNA-Ala-CGC-1-2 Sc: 45.5 >>>>>.>..>>>>.........<<<<.>>>>>.............................<<<<<................>>>.>.......<.<<<<.<<<<<. GGGGGTGTAGCTCACTTGGTA.GAGCGCGTCATTTGCActgtcgaatacagtaggaa...TTGACGAG...........GtACTGTGTTCGATCCCCAGCTCCTCCA tRNA-Ala-TGC-1-1 Sc: 48.7
Arg tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTCCGCGTAGCACAGTGGT.A.GTGCGCTTGACTACGAttcctctttctggatccga.........................ATCAAGAG...........GtCGCGATTTCGAATATCGCCGTGGATT tRNA-Arg-ACG-1-1 Sc: 65.2 GTCCGCGTAGCACAGTGGT.A.GTGCGCTTGACTACGAtttcgtcattaattctgataaatcggc.................ATCAAGAG...........GtCGCGATTTCGAATATCGCCGTGGATT tRNA-Arg-ACG-1-3 Sc: 64.9 GTCCGCGTAGCACAGTGGT.A.GTGCGCTTGACTACGAttacgttggcatattttgtatcagcaagtgtgcctcgaatcatcATCAAGAG...........GtCGCGATTTCGAATATCGCCGTGGATT tRNA-Arg-ACG-1-2 Sc: 64.2 >>>>>>>..>>>>.........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTTCGCATGGTGCAGTGGT.A.GCATATCGCTTTCCGGtggtggtt....................................CGGCGAAG...........AtCATGGGTTCGAACCCCATTGCGAATT tRNA-Arg-CCG-1-1 Sc: 55.1 >>>>>>>...>>>.........<<<..>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt..........................ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-1 Sc: 55.9 GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt..........................ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-2 Sc: 55.9 GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt..........................ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-3 Sc: 55.9 GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt..........................ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-4 Sc: 55.9 GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt..........................ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-5 Sc: 55.9 >>>>>>>..>>>...........<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGGCGTGGCCAAATGGTtA.CGGCGTCCGCTTCCTAttaattgattaccaattcagccggt...................AGCGGGAG...........AtTGTGGGTTCGATCCCCACCGTTGGTT tRNA-Arg-CCT-1-2 Sc: 57.3 GCCGGCGTGGCCAAATGGTtA.CGGCGTCCGCTTCCTAttaattgattatcaattcagccggt...................AGCGGGAG...........AtTGTGGGTTCGATCCCCACCGTTGGTT tRNA-Arg-CCT-1-3 Sc: 57.3 GCCGGCGTGGCCAAATGGTtA.CGGCGTCCGCTTCCTAtgataatcagtttaaacacctgatccgaa...............AGCGGGAG...........AtTGTGGGTTCGATCCCCACCGTTGGTT tRNA-Arg-CCT-1-1 Sc: 57.1 >>>>>.>..>>>>.........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<.<<<<<. GCCCGTGTGGCCTAATGGTtA.AGGCTTCTGACTTCTAggttacgcaagtgact............................ATCAGAGG...........AtTGTGGGTTCGAGTCCCACCTTGGGCT tRNA-Arg-TCT-1-1 Sc: 67.6
Asn tRNAs
>>>>>>>..>>>>.........<<<<..>>>>.........................<<<<.................>>>>>.......<<<<<<<<<<<<. TGCCCCGTGGCTGAGTTGGTtACAGCGGTTGACTGTTAgtaaactatactaatttaATCAGACG...........GtCCAGAGTTCGAGTCTCTGCGGGGCAG tRNA-Asn-GTT-1-1 Sc: 56.0 TGCCCCGTGGCTGAGTTGGTtACAGCGGTTGACTGTTAgtataatatactaatttaATCAGACG...........GtCCAGAGTTCGAGTCTCTGCGGGGCAG tRNA-Asn-GTT-1-2 Sc: 56.0 TGCCCCGTGGCTGAGTTGGTtACAGCGGTTGACTGTTAgtataatatactaatttaATCAGACG...........GtCCAGAGTTCGAGTCTCTGCGGGGCAG tRNA-Asn-GTT-1-3 Sc: 56.0 TGCCCCGTGGCTGAGTTGGTtACAGCGGTTGACTGTTAgtatagtatactaatttgATCAGACG...........GtCCAGAGTTCGAGTCTCTGCGGGGCAG tRNA-Asn-GTT-1-4 Sc: 56.0
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TTCCTGTTCGTATAACGGCtA.GTATGCTCGCTTGTCActggaggattcatttccacagcgtaCGCGGGAG...........ATCGGAGTTCGATTCTCCGACAGGAAG tRNA-Asp-GTC-1-1 Sc: 36.4 TTCCTGTTCGTATAACGGCtA.GTATGCTCGCTTGTCAttggaggattcagttccacagcgtcCGCGGGAG...........ATCGGAGTTCGATTCTCCGACAGGAAG tRNA-Asp-GTC-1-2 Sc: 36.4
Cys tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GTGGGAGTAGCTCAGTTttGGTtAGAGCAACCGATTGCAAttttatatcgcaatcATCGGTAG...........GtCGTGGGTTCGAATCCCACTTCCCACT tRNA-Cys-GCA-1-1 Sc: 69.5 GTGGGAGTAGCTCAGTTttGGTtAGAGCAACCGATTGCAAttatttgcaact...ATCGGTAG...........GtCGTGGGTTCGAATCCCATTTCCCACT tRNA-Cys-GCA-2-1 Sc: 66.1 GTGGGAGTAGCTCAGTTttGGTtAGAGCAACCGATTGCAAttttattcgcaatc.ATCGGTAG...........GtCGTGGGTTCGAATCCCATTTCCCACT tRNA-Cys-GCA-2-2 Sc: 66.0
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGCTTCTTAGTATAACGGTtA.GTACATGAGATTCTGA................................TTCTCGTG...........ACCTGGGTTCGACTCCCAGAGAGGCCT tRNA-Gln-CTG-1-1 Sc: 63.8 GGCTTCTTAGTATAACGGTtA.GTACATGAGATTCTGA................................TTCTCGTG...........ACCTGGGTTCGACTCCCAGAGAGGCCT tRNA-Gln-CTG-1-2 Sc: 63.8 GGCTTCTTAGTATAACGGTtA.GTACATGAGATTCTGA................................TTCTCGTG...........ACCTGGGTTCGACTCCCAGAGAGGCCT tRNA-Gln-CTG-1-3 Sc: 63.8 >>>>.>>..>>>>.........<<<<.>>>>>.......................................<<<<<...............>>>>>.......<<<<<<<.<<<<. GGCGACATCGTCTAGTGGTtA.GGACGTTCGGTTTTGAagggttgcgtggtcatccgcgtatttcaactgTCCGAACG...........ACCTGGGTTCGAACCCCAGTGACGCCT tRNA-Gln-TTG-1-1 Sc: 55.2 GGCGATATCGTCTAGTGGTtA.GGACGTTCGGTTTTGAtgttatcatt......................TCCGAGCA...........ACCTGGGTTCGATCCCCAGTAGCGCCT tRNA-Gln-TTG-2-1 Sc: 49.9
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTCAGTAGTATAACGGTtA.GTATAACCGCTTCTCAgatttcaagtacccttgtttctgtt...CGCGGTAG...........ACCAGGGTTCAACTCCCTGCTGGAGAA tRNA-Glu-CTC-1-3 Sc: 48.6 TCTTCAGTAGTATAACGGTtA.GTATAACCGCTTCTCAtttgaagattaagtatcttctatgaa..CGCGGTAG...........ACCAGGGTTCAACTCCCTGCTGGAGAA tRNA-Glu-CTC-1-1 Sc: 48.5 TCTTCAGTAGTATAACGGTtA.GTATAACCGCTTCTCAgtttccgagaaatactcggctttctgtcCGCGGTAG...........ACCAGGGTTCAACTCCCTGCTGGAGAA tRNA-Glu-CTC-1-2 Sc: 48.4 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtaaccggatttataaggtactgtt...CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-1 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtatttgatccgtcaaaactgct.....CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-2 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtattgggattctccgattctgtt....CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-3 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtgattggatttatccagttctgtt...CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-4 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtgattggatttatccagttctgtc...CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-5 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtacttggaaattccagtctgtg.....CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-6 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtgattggatttatccagttctgtt...CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAT tRNA-Glu-CTC-3-1 Sc: 45.1 >>>>>>>..>>>>.........<<<<.>>>>>...................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTCGATAGTACAGGGGTtA.GTATATCCGCTTTTCAggaactcaacttccgatgtgg.......CGCGGACG...........ACCCGGGTTCGAATCCCGGTCGGAGAA tRNA-Glu-TTC-2-1 Sc: 59.1 TCTTCGATAGTACAGGGGTtA.GTATATCCGCTTTTCAggaactcaacttccgatgtgg.......CGCGGACG...........ACCCGGGTTCGAATCCCGGTCGGAGAA tRNA-Glu-TTC-2-2 Sc: 59.1 TCTTCGATAGTACAGGGGTtA.GTATACCCGCTTTTCAggatcttaaagtccaggg..........CGCGGGCG...........ACCCGGGTTCGATTCCCGGTCGGAGAA tRNA-Glu-TTC-1-1 Sc: 59.0
Gly tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>................................................<<<<<................>>>>>.......<<<<.<<<<<<<<. ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........G.CAAGGGTTCGACTCCCT.TACGGTGTA tRNA-Gly-GCC-1-2 Sc: 48.5 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........G.CAAGGGTTCGACTCCCT.TACGGTGTA tRNA-Gly-GCC-1-3 Sc: 48.5 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........G.CAAGGGTTCGACTCCCT.TACGGTGTA tRNA-Gly-GCC-1-5 Sc: 48.5 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........G.CAAGGGTTCGACTCCCT.TACGGTGTA tRNA-Gly-GCC-1-8 Sc: 48.5 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCAttaggtgaatt..............................TCGATGCG...........G.CAAGGGTTCGACTCCCT.TACGGTGTA tRNA-Gly-GCC-1-1 Sc: 41.2 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCAttaggtgattt..............................TCGATGCG...........G.CAAGGGTTCGACTCCCT.TACGGTGTA tRNA-Gly-GCC-1-6 Sc: 41.2 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCAttaggtgattt..............................TCGATGCG...........G.CAAGGGTTCGACTCCCT.TACGGTGTA tRNA-Gly-GCC-1-7 Sc: 41.2 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCAtttggctactt..............................TCGATGCG...........G.CAAGGGTTCGACTCCCT.TACGGTGTA tRNA-Gly-GCC-1-9 Sc: 41.2 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCAtctgagtttatcagggaaagaaaa.................TCGATGCG...........G.CAAGGGTTCGACTCCCT.TACGGTGTA tRNA-Gly-GCC-1-4 Sc: 40.7 >>>>>>>..>>>>..........<<<<.>>>>>................................................<<<<<................>>>>>.......<<<<.<<<<<<<<. ACGCTGTTGGTGTATT.GGT.A.ACATTAGAGCTTCCCAttgtcgtcagtggccgtcttcaggcggataat.........TGCTCTAG...........C.ACGGGGTTCGATTCCCC.GACAGCGTA tRNA-Gly-CCC-1-2 Sc: 42.0 ACGCTGTTGGTGTATT.GGT.A.ACATTAGAGCTTCCCAttatctgattaatggccaccttgtagttaacggtggacaatTGCTCTAG...........C.ACGGGGTTCGATTCCCC.GACAGCGTA tRNA-Gly-CCC-1-1 Sc: 41.7 >>>>>>>..>>>>..........<<<<.>>>>>................................................<<<<<................>>>>>.......<<<<.<<<<<<<<. GCGCTAATCGTCTAGT.GGTtA.GGATGGCTCCCTTCCA.........................................AGGAGTCG...........A.CCGGCGTTCGAATCGCC.GTTGGCGCA tRNA-Gly-TCC-1-1 Sc: 56.3 GCGCTAATCGTCTAGT.GGTtA.GGATGGCTCCCTTCCA.........................................AGGAGTCG...........A.CCGGCGTTCGAATCGCC.GTTGGCGCA tRNA-Gly-TCC-1-2 Sc: 56.3 GCGCTAATCGTCTAGT.GGTtA.GGATGGCTCCCTTCCAtgagttca.................................AGGAGTCG...........A.CCGGCGTTCGAATCGCC.GTTGGCGCA tRNA-Gly-TCC-1-3 Sc: 49.1 >>>>>.>..>>>>..........<<<<.>>>>>................................................<<<<<................>>>>>.......<<<<.<<.<<<<<. GGCTTTATGGCCTAAAAGGT.A.GGGCCTCTGACTTCCA.........................................ATCAGAGG...........AtTGTAGATTCGAGTTCTAcCTTGAGCCC tRNA-Gly-TCC-2-1 Sc: 38.8
His tRNAs
>>>>>>>..>>>...........<<<.>>>>>.................<<<<<...............>>>>>.......<<<<<<<<<<<<. GTCCCTATAGTCTAGTGGTtA.TGACGTAACATTGTGG..........CTGTTGAG...........GCGCCTGTTCGATTCAGGCTAGGGACA tRNA-His-GTG-1-1 Sc: 70.0 GTCCCTATAGTCTAGTGGTtA.TGACGTAACATTGTGG..........CTGTTGAG...........GCGCCTGTTCGATTCAGGCTAGGGACA tRNA-His-GTG-1-3 Sc: 70.0 GTCCCTATAGTCTAGTGGTtA.TGACGTAACATTGTGGagtttgagatCTGTTGAG...........GCGCCTGTTCGATTCAGGCTAGGGACA tRNA-His-GTG-1-2 Sc: 62.7
Ile tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAatcattaagttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-2 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAattatcgagttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-3 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAattaaagagttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-4 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAattaaagagttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-5 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAatcattaagttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-6 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAataaaaaccagttatt.ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-1 Sc: 51.8 >>>>>>>..>>>>...........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. TTCCCGTTAACTCAGT.GGTc.A.GAGTAGTGTGCTTATGaggatacagttttattgTCACACCG...........GtCGTGGGTTCAACTCCCACACGGGAAA tRNA-Ile-TAT-1-1 Sc: 54.8
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......................................<<<<<.>>>..............<<<..>>>>>.......<<<<<.<<<<<<<. GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtaattgattattacgtaagaat..........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-1 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtgttgtttcaacactgaaagcc..........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-2 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtgttgtacaacactgaaagcc...........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-3 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtgttgtacaacactgaaagcc...........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-4 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtgttgttcaacactgaaagcc...........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-5 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtaatcgagtattacgtaagaaa..........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-6 Sc: 51.9 >>>>>>>..>>>>..........<<<<.>>>>>.......................................<<<<<.>>................<<..>>>>>.......<<<<<.<<<<<<<. GGCGAAGTGTCCGAGTGGTt.A.TGGAGTGTCGTTCAGGtgtgaaacg.......................CCGGCATGC....TTT.........GCGCGTGGGTTCGAATCCCAC.CTTCGTCA tRNA-Leu-CAG-1-1 Sc: 50.8 >>>>>>>..>>>............<<<.>>>>.........................................<<<<.>>.>............<.<<..>>>>>.......<<<<<.<<<<<<<. GGACAGATGCCCGAGTGGTt.A.AGGGGACGGTCTCAAGttgcatgcactttccctgattaaggggttgaaATCCGTTGCGT............AAGCGCGTGAGTTCGAATCTCAC.TCTGTTCA tRNA-Leu-CAA-1-1 Sc: 57.0 GGACAGATGCCCGAGCGGTt.A.AGGGGACGGTCTCAAGtggaatacactttccctgataagggttgaa..ATCCGTTGCGT............AAGCGCGTGAGTTCGAATCTCAC.TCTGTTCA tRNA-Leu-CAA-2-2 Sc: 54.7 GGACAGATGCCCGAGCGGTt.A.AGGGGACGGTCTCAAGtggaatacactttccctgataaagggttgaa.ATCCGTTGCGT............AAGCGCGTGAGTTCGAATCTCAC.TCTGTTCA tRNA-Leu-CAA-2-1 Sc: 54.6 >>>>>>>..>>>............<<<.>>>>.........................................<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<. GCGGTGTTGACCGAGTGGTt.A.AGGTGTCGGCCTTAAGctagcttcttttgtg.................ATCCGATGGTCGA........GAGACCGCGTGAGTTCGAACCTCAC.ACACCGCA tRNA-Leu-TAA-1-1 Sc: 59.0
Lys tRNAs
>>>.>>>..>>>>.........<<<<.>>>>>.....................................................<<<<<................>>>>>.......<<<<<<<<.<<<. GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-1 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-3 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-4 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-5 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-6 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcttctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-7 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAacgagtctgtttgagccggttttgggccatcaatcaatcattcgtcATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-2 Sc: 71.5 >>>>>>>..>>>>.........<<<<.>>>>>.....................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTTCGTAGCTGAGTTGGTtACAGCGTCCGACTTTTAagctttcacaagcttat.............................ATCGGGCG...........AtCACGGGTTCGAGCCCCGTCGAAGGCT tRNA-Lys-TTT-1-1 Sc: 68.4
Met tRNAs
>>>>>>>..>>>>........<<<<..>>>...................................<<<.................>>>>>.......<<<<<<<<<<<<. GCCCTCATGGTGTAGTGGTA.ACACGAAGGTCTCATAatatgacgttagcttggttaacggtaATCCTCAG...........C.TCTGAGTTCGATTCTCAGTGAGGGCA tRNA-Met-CAT-1-1 Sc: 59.9 GCCCTCATGGTGTAGTGGTA.ACACGAAGGTCTCATAatatgacgttagcctggttaacggtaATCCTCAG...........C.TCTGAGTTCGATTCTCAGTGAGGGCA tRNA-Met-CAT-1-2 Sc: 59.9 GCCCTCATGGTGTAGTGGTA.ACACGAAGGTCTCATAatatgacgttagcttggttaacggtaATCCTCAG...........C.TCTGAGTTCGATTCTCAGTGAGGGCA tRNA-Met-CAT-1-3 Sc: 59.9 >>>>>>>..>>>>........<<<<.>>>>>.................................<<<<<................>>>>>.......<<<<<<<<<<<<. AACAGCGTAATTCAGAGGAA.GAATGCAAGGCTCATAattatttgttt...............ACCTTGAA...........GtCGCTGGATCGAAACCAGCCGCTGTTA tRNA-iMet-CAT-1-1 Sc: 45.4 AACAGCGTAATTCAGAGGAA.GAATGCAAGGCTCATAtttactttggt...............ACCTTGAA...........GtCGCTGGATCGAAACCAGCCGCTGTTA tRNA-iMet-CAT-1-2 Sc: 45.4 AACAGCGTAATTCAGAGGAA.GAATGCAAGGCTCATAtttacttgggt...............ACCTTGAA...........GtCGCTGGATCGAAACCAGCCGCTGTTA tRNA-iMet-CAT-1-3 Sc: 45.4
Phe tRNAs
>>>>.>>..>>>>........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<.<<<<. GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcattgagaatcaa.....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-1 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcatcaggaatcaa.....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-2 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcatcaggaatcaa.....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-3 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcagtaaagaatcaa....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-4 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttccgtaactcgagatttcaATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-5 Sc: 67.2
Pro tRNAs
>>>>>>>..>>>>........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattatgtaatccggctt...............TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-3 Sc: 53.7 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggatttcgcaatccggctt...............TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-4 Sc: 53.7 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattatgtaatccggctt...............TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-5 Sc: 53.7 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattatgtaatccggctt...............TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-6 Sc: 53.7 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattacataaagttttccggctt..........TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-1 Sc: 53.6 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattacataaagttctccggctt..........TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-2 Sc: 53.6 >>>>>>>..>>>>........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTAATAGTGTAATCGTC.GCACGCATCCTTCGGGatcgttagtcttcccgcagcttatggctgcttaattTGGATGTA...........G.TCTGGGTTCAATTCCCAGTTGGGCCC tRNA-Pro-CGG-1-1 Sc: 34.2 >>>>>.>..>>>..........<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGTTTGTAGTGTAGTGGTA.TCGCGCTTCATTTGGGcttcacggagcaccg.....................TTGAAGAG...........GtCCCGCGTTCGATCCGCGGCTGACCCC tRNA-Pro-TGG-1-1 Sc: 51.5
SeC tRNAs
Ser tRNAs
>>>>>>>...>>>...........<<<.>>>>>................................<<<<<.>>>............<<<..>>>>>.......<<<<<.<<<<<<<. GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAtttacaaattcctc...........ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-1 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttcagatattcctc...........ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-2 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttatgaaattcctc...........ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-3 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttatgaaattcctc...........ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-4 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttatgaaattcctc...........ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-5 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttttgaatattcctc..........ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-6 Sc: 45.1 >>>>>>>...>>>...........<<<.>>>>>................................<<<<<.>>>............<<<..>>>>>.......<<<<<.<<<<<<<. GACTTGATGcTCCGAGTGGTtA.AGGGGCGGGACTTGAAtggatcacgtaatccaagaa.....ATCCCGTGTCGA........AAGACGCGCAGGTTCGAACCCTGC.TCAAGTCG tRNA-Ser-TGA-1-1 Sc: 63.0 >>>>>>>...>>>...........<<<.>>>>>................................<<<<<.>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GATACAGTC.GGATAGTGGTtA.TTCCGTCACATTGCTAtggttgctctagtaatcagatgaagATGTGGTGCCT.TC.......GGGCGCGTGAGTTCGAATCTCAC.CTGTGTCA tRNA-Ser-GCT-1-1 Sc: 42.3
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>............<<<.>>>>>................................<<<<<....................>>>>>.......<<<<<<<<<<<<. GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAactcgtttagatatcgtcta.....ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-5 Sc: 57.4 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAagaatagcaattacatttcacta..ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-3 Sc: 57.3 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAaaaatagcaattgcaatccacta..ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-4 Sc: 57.3 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAtgtagagcgttccattcgcttattaATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-1 Sc: 57.2 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAacaagttgttttacaacgtaacta.ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-2 Sc: 57.2 >>>>>.>..>>>>..........<<<<.>>>>>................................<<<<<....................>>>>>.......<<<<<<.<<<<<. GCCCTTGTAGCTCAGG.GGTtA.GAGTATGGCCTTCGTAgtcattacg................AGGTCAGGTTAGg..........GtCCATGGTTCAAATCCATGCTGGGGCA tRNA-Thr-CGT-1-1 Sc: 50.8 >>>.>>>..>>>............<<<.>>>>>................................<<<<<....................>>>>>.......<<<<<<<<.<<<. GCCTCGGTAGTTTAGT.GGTtA.TAATTTTTCACTTGTAgcgtatctacatg............ATGAAAGG...............GtCCTGTGTTCGACTCACAGCCGTGGCA tRNA-Thr-TGT-1-1 Sc: 60.6
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GGAGCTGTAGTTCAATTGGTA.GAACGACGGATTCCAActacttttggttgatATCCGTCG...........GtCGCAGGTTCGATTCCTGTCAGCTTCA tRNA-Trp-CCA-1-1 Sc: 68.7 >>>>>>>..>>>>.........<<<<..>>>>......................<<<<.................>>>>>.......<<<<<<<<<<<<. GGAGTCGTAGTTCAGT.GGTA.GAATATCGGATTCCAAttattggaagt....ATCCGCCG...........GtCGCAGGTTCAATCCCTGTCGACTTCA tRNA-Trp-CCA-2-2 Sc: 59.0 GGAGTCGTAGTTCAGT.GGTA.GAATATCGGATTCCAAttactggaaat....ATCCGCCG...........GtCGCAGGTTCAATCCCTGTCGACTTCA tRNA-Trp-CCA-2-1 Sc: 58.9
Tyr tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>..............................................<<<<<................>>>>>.......<.<<<<<<<<<<<. CTCTCCGTAGTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggtttccaaagtcac......................ATCTGAAA...........GtCGTGCGTTCGACTC.GCACCGGGGAGA tRNA-Tyr-GTA-1-1 Sc: 53.7 CTCTCCGTAGTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggttaacaacttcac......................ATCTGAAA...........GtCGTGCGTTCGACTC.GCACCGGGGAGA tRNA-Tyr-GTA-1-2 Sc: 53.7 CTCTCCGTAGTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggttaacaacttcac......................ATCTGAAA...........GtCGTGCGTTCGACTC.GCACCGGGGAGA tRNA-Tyr-GTA-1-3 Sc: 53.7 CTCTCCGTAGTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggttaacaatctcac......................ATCTGAAA...........GtCGTGCGTTCGACTC.GCACCGGGGAGA tRNA-Tyr-GTA-1-4 Sc: 53.7 >>>.>.>..>>>>...........<<<<.>>>>>..............................................<<<<<................>.>>>.......<.<<.<<.<.<<<. TCT.CAGTAGTTTAGTgTGGTatAGAGCGTCAGACTGTAAttatctacaattatctataatcgtctttaagattaggatATCTGAAA...........AtCGTGGGTTTGACTCgCCCCCGGGAGAT tRNA-Tyr-GTA-2-1 Sc: 22.7
Val tRNAs
>>>>.>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<.<<<<. GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttgctcagatgtctt................CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-3 Sc: 49.9 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttttcctgatgtctt................CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-4 Sc: 49.9 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcatcgaatgtctt................CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-7 Sc: 49.9 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAtttacacgagtgtctt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-1 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcactgaaatgtctt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-2 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAtttgtttggatgtttt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-5 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcctttgaatgtctt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-6 Sc: 49.8 >>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. ATCTCATTGGCTCAGTTGGTtAGAGTGTTCGCTTCACAttaatgataggtcataagatctagtgat...CGCGAAAG...........GtCCCCGGTTCGATCCCGGGATGGGATA tRNA-Val-CAC-1-2 Sc: 70.0 ATCTCATTGGCTCAGTTGGTtAGAGTGTTCGCTTCACAtgattacgggttttaactcgttgctgctgaaCGCGAAAG...........GtCCCCGGTTCGATCCCGGGATGGGATA tRNA-Val-CAC-1-1 Sc: 69.9