Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>.>..>>>>..........<<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGGTGTAGCTCATTTGGC.A.GAGCGCGTCATTAGCAtcttctgttataggttct....TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-2 Sc: 53.5 GGGGGTGTAGCTCATTTGGC.A.GAGCGCGTCATTAGCAtcttcaaatcataagattc...TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-3 Sc: 53.5 GGGGGTGTAGCTCATTTGGC.A.GAGCGCGTCATTAGCAtcttattttctaaagattc...TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-4 Sc: 53.5 GGGGGTGTAGCTCATTTGGC.A.GAGCGCGTCATTAGCAtctttcctaatagatcctgat.TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-1 Sc: 53.4 GGGGGTGTAGCTCATTTGGC.A.GAGCGCGTCATTAGCAttttatcctatcttaagatcatTTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-5 Sc: 53.4 .>>>>.>..>>>>..........<<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<.<<<<.. GGGGGTGTAGCTCATTTGGC.A.GAGCGCGTCATTAGCAttttatctcaagttaagattc.TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTC.. tRNA-Ala-AGC-2-1 Sc: 34.8 >>>>>.>..>>>>..........<<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGGTGTGGTCAAGG.GGT.A.TGACAAGCGATCCGCAtttaggacgctt..........TTCGCTTA...........G.CCTGGGTTCGAGTCCCAGCTCCTCCA tRNA-Ala-CGC-1-1 Sc: 45.5 GGGGGTGTGGTCAAGG.GGT.A.TGACAAGCGATCCGCAtttaggacgctt..........TTCGCTTA...........G.CCTGGGTTCGAGTCCCAGCTCCTCCA tRNA-Ala-CGC-1-2 Sc: 45.5 >>>>>.>..>>>>..........<<<<.>>>>>.............................<<<<<................>>>.>.......<.<<<<.<<<<<. GGGGGTGTAGCTCACTTGGT.A.GAGCGCGTCATTTGCActgtcgaatacagtaggaa...TTGACGAG...........GtACTGTGTTCGATCCCCAGCTCCTCCA tRNA-Ala-TGC-1-1 Sc: 48.7 >>>>>.>..>>>>..........<<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGATGTAGTACAGT.GGTtA.GTACATTATGTTTGCA......................TCATAGTA...........A.CTGGGGTTCGATTCCCCACCTCTCCA tRNA-Ala-TGC-2-1 Sc: 46.0 >>>>..>..>>>>..........<<<<.>>>>...............................<<<<................>.>>.........<<.<<..<<<<. GGGGTTGTAGTACAGT.GGTtA.GTACATTATATTTGCA......................TCATAGTA...........A.CTTGGATTCGATTCCCCATTTCTCCA tRNA-Ala-TGC-3-1 Sc: 23.4
Arg tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTCCGCGTAGCACAGTGGT.A.GTGCGCTTGACTACGAttcctctttctggatccga.........................ATCAAGAG...........GtCGCGATTTCGAATATCGCCGTGGATT tRNA-Arg-ACG-1-1 Sc: 65.2 GTCCGCGTAGCACAGTGGT.A.GTGCGCTTGACTACGAtttcgtcattaattctgataaatcggc.................ATCAAGAG...........GtCGCGATTTCGAATATCGCCGTGGATT tRNA-Arg-ACG-1-2 Sc: 64.9 GTCCGCGTAGCACAGTGGT.A.GTGCGCTTGACTACGAttacgttggcatattttgtatcagcaagtgtgcctcgaatcatcATCAAGAG...........GtCGCGATTTCGAATATCGCCGTGGATT tRNA-Arg-ACG-1-3 Sc: 64.2 >>>>>>>..>>>>.........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTTCGCATGGTGCAGTGGT.A.GCATATCGCTTTCCGGtggtggtt....................................CGGCGAAG...........AtCATGGGTTCGAACCCCATTGCGAATT tRNA-Arg-CCG-1-1 Sc: 55.1 >>>>>>>...>>>.........<<<..>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt..........................ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-1 Sc: 55.9 .>>>>>>..>>>>.........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<.. TCGCCTTTCGTATAATGGTtA.GTACTACTGTCTTCGA............................................AACAGTCA...........A.TATAGGTTCAAATCCTATAGGGCGTT tRNA-Arg-TCG-2-1 Sc: 36.7 .>>>>>>..>>.>.........<.<<..>>>>...................................................<<<<.................>>>>>.......<<<<<<<<<<<.. ACGCCTTTCGTATAATGGTtA.GGACTACTGTCTTCGA............................................AACAGGCA...........A.TATAGGTTTAAATCCTATAGGGCGCT tRNA-Arg-TCG-3-1 Sc: 31.9 >>>>>>>..>>>...........<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGGCGTGGCCAAATGGTtA.CGGCGTCCGCTTCCTAttaattgattaccaattcagccggt...................AGCGGGAG...........AtTGTGGGTTCGATCCCCACCGTTGGTT tRNA-Arg-CCT-1-2 Sc: 57.3 GCCGGCGTGGCCAAATGGTtA.CGGCGTCCGCTTCCTAttaaatgattatcaaatcagccggt...................AGCGGGAG...........AtTGTGGGTTCGATCCCCACCGTTGGTT tRNA-Arg-CCT-1-3 Sc: 57.3 GCCGGCGTGGCCAAATGGTtA.CGGCGTCCGCTTCCTAtgataatcagtttaaacacctgatccgaa...............AGCGGGAG...........AtTGTGGGTTCGATCCCCACCGTTGGTT tRNA-Arg-CCT-1-1 Sc: 57.1 >>>>>.>..>>>>.........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<.<<<<<. GCCCGTGTGGCCTAATGGTtA.AGGCTTCTGACTTCTAggttacgcaagtgact............................ATCAGAGG...........AtTGTGGGTTCGAGTCCCACCTTGGGCT tRNA-Arg-TCT-1-1 Sc: 67.6
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<. GTTGCTATAGCTCAAT.GGTcA.GAGCGCGATACTGTTA..................ATATTGAG...........A.AGGAGGTTCAATTCCTCCTAGCGACT tRNA-Asn-GTT-2-1 Sc: 58.5 >>>>>>>..>>>>..........<<<<..>>>>.........................<<<<.................>>>>>.......<<<<<<<<<<<<. TGCCCCGTGGCTGAGTTGGTtA.CAGCGGTTGACTGTTAgtaaaatatactaatttaATCAGACG...........GtCCAGAGTTCGAGTCTCTGCGGGGCAG tRNA-Asn-GTT-1-1 Sc: 56.0 TGCCCCGTGGCTGAGTTGGTtA.CAGCGGTTGACTGTTAgtatagtatactaatttgATCAGACG...........GtCCAGAGTTCGAGTCTCTGCGGGGCAG tRNA-Asn-GTT-1-2 Sc: 56.0
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TTCCTGTTCGTATAACGGCtA.GTATGCTCGCTTGTCActggaggattcatttccacagcgtaCGCGGGAG...........ATCGGAGTTCGATTCTCCGACAGGAAG tRNA-Asp-GTC-1-1 Sc: 36.4 TTCCTGTTCGTATAACGGCtA.GTATGCTCGCTTGTCActggaggattcagttccacagcgtcCGCGGGAG...........ATCGGAGTTCGATTCTCCGACAGGAAG tRNA-Asp-GTC-1-2 Sc: 36.4
Cys tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GTGGGAGTAGCTCAGTTttGGTtAGAGCAACCGATTGCAAttttatatcgcaatcATCGGTAG...........GtCGTGGGTTCGAATCCCACTTCCCACT tRNA-Cys-GCA-1-1 Sc: 69.5 GTGGGAGTAGCTCAGTTttGGTtAGAGCAACCGATTGCAAttatttgcaact...ATCGGTAG...........GtCGTGGGTTCGAATCCCATTTCCCACT tRNA-Cys-GCA-2-1 Sc: 66.1
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GGCTTCTTAGTATAACGGTtA.GTACATGAGATTCTGA................................TTCTCGTG...........A..CCTGGGTTCGACTCCCAGAGAGGCCT tRNA-Gln-CTG-1-1 Sc: 63.8 GGCTTCTTAGTATAACGGTtA.GTACATGAGATTCTGA................................TTCTCGTG...........A..CCTGGGTTCGACTCCCAGAGAGGCCT tRNA-Gln-CTG-1-2 Sc: 63.8 GGCTTCTTAGTATAACGGTtA.GTACATGAGATTCTGA................................TTCTCGTG...........A..CCTGGGTTCGACTCCCAGAGAGGCCT tRNA-Gln-CTG-1-3 Sc: 63.8 >>>>.>>..>>>>.........<<<<.>>>>>.......................................<<<<<.................>>>>>.......<<<<<<<.<<<<. GGCGACATCGTCTAGTGGTtA.GGACGTTCGGTTTTGAggggttgcgtggtcatccgcgtatttcaactgTCCGAACG...........A..CCTGGGTTCGAACCCCAGTGACGCCT tRNA-Gln-TTG-1-1 Sc: 55.2 GGCGATATCGTCTAGTGGTtA.GGACGTTCGGTTTTGAtgttatcatt......................TCCGAGCA...........A..CCTGGGTTCGATCCCCAGTAGCGCCT tRNA-Gln-TTG-2-1 Sc: 49.9 >>>>>>>..>>>>.........<<<<.>>>>>.......................................<<<<<.................>>>>>.......<<<<<<<<<<<<. TGACCTCTAGGGTAATGGT.A.ACCCGTCTCCCTTTGG................................CGGAGAAG...........ActTCCGTGTTCGAATCACGGGGGGTCAG tRNA-Gln-TTG-3-1 Sc: 46.3
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTCAGTAGTATAACGGTtA.GTATAACCGCTTCTCAgatttcaagtacccttgtttctgtt...CGCGGTAG...........ACCAGGGTTCAACTCCCTGCTGGAGAA tRNA-Glu-CTC-1-3 Sc: 48.6 TCTTCAGTAGTATAACGGTtA.GTATAACCGCTTCTCAtttgaagattaagtatcttctatgaa..CGCGGTAG...........ACCAGGGTTCAACTCCCTGCTGGAGAA tRNA-Glu-CTC-1-1 Sc: 48.5 TCTTCAGTAGTATAACGGTtA.GTATAACCGCTTCTCAgtttccgagaaatactcggttttctgtcCGCGGTAG...........ACCAGGGTTCAACTCCCTGCTGGAGAA tRNA-Glu-CTC-1-2 Sc: 48.4 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtacttggaaattccagtctgtg.....CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-1 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtgattggatttatctagttctgtt...CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-2 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtgattggatttatccagttctgtt...CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-3 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtattgggattctccgattctgtt....CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-4 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtaaccggatttataaggtactgtt...CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-5 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtatttgatccgtcaaaactgct.....CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-7 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtgattggatttatccagtttctgtt..CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-6 Sc: 46.9 >>>>>>>..>>>>.........<<<<.>>>>>...................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTCGATAGTACAGGGGTtA.GTATATCCGCTTTTCAggaactcaacttccgatgtgg.......CGCGGACG...........ACCCGGGTTCGAATCCCGGTCGGAGAA tRNA-Glu-TTC-2-1 Sc: 59.1 TCTTCGATAGTACAGGGGTtA.GTATATCCGCTTTTCAggaactcaacttccgatgtgg.......CGCGGACG...........ACCCGGGTTCGAATCCCGGTCGGAGAA tRNA-Glu-TTC-2-2 Sc: 59.1 TCTTCGATAGTACAGGGGTtA.GTATACCCGCTTTTCAggatcttaaagtccaggg..........CGCGGGCG...........ACCCGGGTTCGATTCCCGGTCGGAGAA tRNA-Glu-TTC-1-1 Sc: 59.0
Gly tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>................................................<<<<<................>>>>>.......<<<<.<.<<<<<<<. ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........G.CAAGGGTTCGACTCCCT.T.ACGGTGTA tRNA-Gly-GCC-1-2 Sc: 48.5 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........G.CAAGGGTTCGACTCCCT.T.ACGGTGTA tRNA-Gly-GCC-1-5 Sc: 48.5 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........G.CAAGGGTTCGACTCCCT.T.ACGGTGTA tRNA-Gly-GCC-1-6 Sc: 48.5 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........G.CAAGGGTTCGACTCCCT.T.ACGGTGTA tRNA-Gly-GCC-1-7 Sc: 48.5 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCAttaggtgaatt..............................TCGATGCG...........G.CAAGGGTTCGACTCCCT.T.ACGGTGTA tRNA-Gly-GCC-1-1 Sc: 41.2 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCAttaggtgattt..............................TCGATGCG...........G.CAAGGGTTCGACTCCCT.T.ACGGTGTA tRNA-Gly-GCC-1-3 Sc: 41.2 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCAttaggtgattt..............................TCGATGCG...........G.CAAGGGTTCGACTCCCT.T.ACGGTGTA tRNA-Gly-GCC-1-4 Sc: 41.2 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCAtttggctactt..............................TCGATGCG...........G.CAAGGGTTCGACTCCCT.T.ACGGTGTA tRNA-Gly-GCC-1-8 Sc: 41.2 ACACCGTTGGTGAAAC.GGT.A.TCATGCATCGTTGCCAtctgagtttatcagggaaagaaaa.................TCGATGCG...........G.CAAGGGTTCGACTCCCT.T.ACGGTGTA tRNA-Gly-GCC-1-9 Sc: 40.7 >>>>>>>..>>>>..........<<<<.>>>>>................................................<<<<<................>>>>>.......<<<<.<.<<<<<<<. ACGCTGTTGGTGTATT.GGT.A.ACATTAGAGCTTCCCAttgtcgtcagtggccgtcttcaggcggataat.........TGCTCTAG...........C.ACGGGGTTCGATTCCCC.G.ACAGCGTA tRNA-Gly-CCC-1-2 Sc: 42.0 ACGCTGTTGGTGTATT.GGT.A.ACATTAGAGCTTCCCAttatctgattaatggccaccttgtagttaacggtggacaatTGCTCTAG...........C.ACGGGGTTCGATTCCCC.G.ACAGCGTA tRNA-Gly-CCC-1-1 Sc: 41.7 >>>>>>>..>>>>..........<<<<.>>>>>................................................<<<<<................>>>>>.......<<<<.<.<<<<<<<. GCGCTAATCGTCTAGT.GGTtA.GGATGGCTCCCTTCCA.........................................AGGAGTCG...........A.CCGGCGTTCGAATCGCC.G.TTGGCGCA tRNA-Gly-TCC-1-2 Sc: 56.3 GCGCTAATCGTCTAGT.GGTtA.GGATGGCTCCCTTCCA.........................................AGGAGTCG...........A.CCGGCGTTCGAATCGCC.G.TTGGCGCA tRNA-Gly-TCC-1-3 Sc: 56.3 GCGCTAATCGTCTAGT.GGTtA.GGATGGCTCCCTTCCAtgagttca.................................AGGAGTCG...........A.CCGGCGTTCGAATCGCC.G.TTGGCGCA tRNA-Gly-TCC-1-1 Sc: 49.1 GCGAGTATAGTATAATTGGT.A.ATACCTTCGCCTTCCA.........................................AGCGAAT............TtTTTCAGTTCGAGTCTGA.A.TACTCGTA tRNA-Gly-TCC-2-1 Sc: 45.5 >>>>>.>..>>>>..........<<<<.>>>>>................................................<<<<<................>>>>>.......<<<<.<.<.<<<<<. GGCTTTATGGCCTAAAAGGT.A.GGGCCTCTGACTTCCA.........................................ATCAGAGG...........AtTGTAGATTCGAGTTCTAcC.TTGAGCCC tRNA-Gly-TCC-3-1 Sc: 38.8
His tRNAs
>>>>>>>..>>>...........<<<.>>>>>.................<<<<<...............>>>>>.......<<<<<<<<<<<<. GTCCCTATAGTCTAGTGGTtA.TGACGTAACATTGTGG..........CTGTTGAG...........GCGCCTGTTCGATTCAGGCTAGGGACA tRNA-His-GTG-1-2 Sc: 70.0 GTCCCTATAGTCTAGTGGTtA.TGACGTAACATTGTGG..........CTGTTGAG...........GCGCCTGTTCGATTCAGGCTAGGGACA tRNA-His-GTG-1-3 Sc: 70.0 GTCCCTATAGTCTAGTGGTtA.TGACGTAACATTGTGGagtttgagatCTGTTGAG...........GCGCCTGTTCGATTCAGGCTAGGGACA tRNA-His-GTG-1-1 Sc: 62.7 >>>>..>..>>>>.........<<<<.>>>>>.................<<<<<...............>>>>>.......<<<<<<..<<<<. GTGATTTTAGCTCAATGGT.A.GAGCGCTTCTTTGTGG..........CAGAAGAT...........ATCTCAGTTCAATTCTGGGATTTCACC tRNA-His-GTG-2-1 Sc: 43.5
Ile tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAattaaagagttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-2 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAataaaaaccagttatt.ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-1 Sc: 51.8 >>>>>>>..>>>>...........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. AAGCCTATAGTATAGC.GGTt.A.GTACCCATCGTTGATA.................TCGGTGTG...........G.CAGAGGTTCAATTCCTCTTGGGCTTA tRNA-Ile-GAT-1-1 Sc: 44.0 >>>>>>>..>>>>...........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. TTCCCGTTAACTCAGT.GGTc.A.GAGTAGTGTGCTTATGaggatacagttttatttTCACACCG...........GtCGTGGGTTCAACTCCCACACGGGAAA tRNA-Ile-TAT-1-1 Sc: 54.8
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......................................<<<<<.>>>..............<<<..>>>>>.......<<<<<.<<<<<<<. GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtaattgattattacgtaagaat..........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-1 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtaatcgagtattacgtaagaaa..........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-2 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtgttgtacaacactgaaagcc...........CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-3 Sc: 51.9 >>>>>>>..>>>>..........<<<<.>>>>>.......................................<<<<<.>>................<<..>>>>>.......<<<<<.<<<<<<<. GGCGAAGTGTCCGAGTGGTt.A.TGGAGTGTCGTTCAGGtgtgaaacg.......................CCGGCATGC....TTT.........GCGCGTGGGTTCGAATCCCAC.CTTCGTCA tRNA-Leu-CAG-1-1 Sc: 50.8 >>>>>>>..>>>............<<<.>>>>.........................................<<<<.>>.>............<.<<..>>>>>.......<<<<<.<<<<<<<. GGACAGATGCCCGAGTGGTt.A.AGGGGACGGTCTCAAGttgcatgcactttccctgattaaggggttgaaATCCGTTGCGT............AAGCGCGTGAGTTCGAATCTCAC.TCTGTTCA tRNA-Leu-CAA-1-1 Sc: 57.0 GGACAGATGCCCGAGCGGTt.A.AGGGGACGGTCTCAAGtggaatacactttccctgataagggttgaa..ATCCGTTGCGT............AAGCGCGTGAGTTCGAATCTCAC.TCTGTTCA tRNA-Leu-CAA-2-1 Sc: 54.7 GGACAGATGCCCGAGCGGTt.A.AGGGGACGGTCTCAAGtggaatacactttccctgataaagggttgaa.ATCCGTTGCGT............AAGCGCGTGAGTTCGAATCTCAC.TCTGTTCA tRNA-Leu-CAA-2-2 Sc: 54.6 >>>>>>>..>>>............<<<.>>>>.........................................<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<. GCGGTGTTGACCGAGTGGTt.A.AGGTGTCGGCCTTAAGctagcttcttttgtg.................ATCCGATGGTCGA........GAGACCGCGTGAGTTCGAACCTCAC.ACACCGCA tRNA-Leu-TAA-1-1 Sc: 59.0
Lys tRNAs
>>>.>>>..>>>>..........<<<<.>>>>>.....................................................<<<<<................>>>>>.......<<<<<<<<.<<<. GCCCCCGTGGCGCAATCGGT.A.GCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-2 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.A.GCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcttctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-3 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.A.GCGCGCACGACTCTTAacgagtctgcttgagccggttttgggccatcaatcaatcattcgtcATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-1 Sc: 71.5 >>>>>>>..>>>>..........<<<<.>>>>>.....................................................<<<<<................>.>>>.......<<<.<<<<<<<<. GGGAGTATAGCTCAGT.GGT.A.GAGCAGCTGACTCTTA..............................................ATCAGCCT...........GtCGTGGGTTCGATCCCTTCTACTCCCC tRNA-Lys-CTT-2-1 Sc: 60.4 >>>>>>>..>>>>..........<<<<.>>>>>.....................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTTCGTAGCTGAGTTGGTtA.CAGCGTCCGACTTTTAagctttcacaagcttat.............................ATCGGGCG...........AtCACGGGTTCGAGCCCCGTCGAAGGCT tRNA-Lys-TTT-1-1 Sc: 68.4
Met tRNAs
>>>>>>>..>>>>........<<<.<..>>>...................................<<<.................>>.>.>>.......<<<<<.<<<<<<<. GCCCTCATGGTGTAGTGGTA.ACA.CGAAGGTCTCATAatatgacgttagcctggttaacggtaATCCTCAG...........C.TCT.G.AGTTCGATTCTCAG.TGAGGGCA tRNA-Met-CAT-1-1 Sc: 59.9 >>>>>>>..>>>>........<<<.<.>>>>>.................................<<<<<................>>.>.>>.......<<<<<.<<<<<<<. AACAGCGTAATTCAGAGGAA.GAA.TGCAAGGCTCATAattatttgttt...............ACCTTGAA...........GtCGC.T.GGATCGAAACCAGC.CGCTGTTA tRNA-iMet-CAT-1-1 Sc: 45.4 AACAGCGTAATTCAGAGGAA.GAA.TGCAAGGCTCATAtttacttgggt...............ACCTTGAA...........GtCGC.T.GGATCGAAACCAGC.CGCTGTTA tRNA-iMet-CAT-1-2 Sc: 45.4 AACAGCGTAATTCAGAGGAA.GAA.TGCAAGGCTCATAtttactttggt...............ACCTTGAA...........GtCGC.T.GGATCGAAACCAGC.CGCTGTTA tRNA-iMet-CAT-1-3 Sc: 45.4 TGCGAGATAGTGTAATGGTA.ACA.CATTAGGTTCATA..........................GTCTGAT............AtTGA.GtGGTTCGATTCCCTC.TTTCGCAT tRNA-Met-CAT-2-1 Sc: 41.4 >>>>>>>..>>>>........<<<.<.>>>>...................................<<<<................>>.>.>>.......<<<<<.<<<<<<<. GCCGGTATAGTTTAAAGGTA.GAAaCATACCACTCATA..........................ACGGTAGT...........A.AGAtG.GGTTCGAGTCCCTC.TACTGGCT tRNA-Met-CAT-3-1 Sc: 32.7
Phe tRNAs
>>>>.>>..>>>>........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<.<<<<. GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcattgagaatcaa.....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-1 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcatcaggaatcaa.....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-2 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcatcaagaatcaa.....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-3 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcagtaaagaatcaa....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-5 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttccgtaactcgagatttcaATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-4 Sc: 67.2 >>>>>>>..>>>>........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<. GTGCCGATAGCTTAAATGGTAGAGCACGGAGCTGAAG....................ATTCTGAG...........G.AGGTAGTTCAATTCTGCCTCGGCACA tRNA-Phe-GAA-2-1 Sc: 47.7
Pro tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...........................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GTTTCGTTGGTGCAGT.GGTA.GCATGCCCTCTTAGGGttggatttcgcaatccggctt...............TGGGGGTG.............GtCCTCGGTTCAATCCCGGG.ACGAGACC tRNA-Pro-AGG-1-1 Sc: 53.7 GTTTCGTTGGTGCAGT.GGTA.GCATGCCCTCTTAGGGttggattacataaagttttccggctt..........TGGGGGTG.............GtCCTCGGTTCAATCCCGGG.ACGAGACC tRNA-Pro-AGG-1-2 Sc: 53.6 GTTTCGTTGGTGCAGT.GGTA.GCATGCCCTCTTAGGGttggattacataaagttctccggctt..........TGGGGGTG.............GtCCTCGGTTCAATCCCGGG.ACGAGACC tRNA-Pro-AGG-1-3 Sc: 53.6 >>>>>>>..>>>>.........<<<<.>>>>>...........................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GGCCTAATAGTGTAAT.CGTC.GCACGCATCCTTCGGGatcgttagtcttcccgcagcttatggctgcataattTGGATGTA.............G.TCTGGGTTCAATTCCCAG.TTGGGCCC tRNA-Pro-CGG-1-1 Sc: 34.2 >>>>>.>..>>>...........<<<.>>>>>...........................................<<<<<..................>>>>>.......<<<<<.<.<<<<<. GGGTTTGTAGTGTAGT.GGTA.TCGCGCTTCATTTGGGcttcacggagcaccg.....................TTGAAGAG.............GtCCCGCGTTCGATCCGCGG.CTGACCCC tRNA-Pro-TGG-1-1 Sc: 51.5 >>>>>>>..>>>>.........<<<<.>>>>>...........................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. CAGGTGGAAGTCTATTTGGTA.GGACGCTCGCTTTGGG....................................TGCGAGT.TT...........G.TGCAGGTTCGAGCCCTGC.TCATCTGA tRNA-Pro-TGG-2-1 Sc: 40.0
SeC tRNAs
Ser tRNAs
>>>>>>>...>>>............<<<.>>>>>................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<. GGAGTAGTG.CGACAGTGGTt.A.CTCGGTTCGATTAGAAttttgaaattcctc...........ATCGAAT.GCCG.TC........AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-1 Sc: 45.1 GGAGTAGTG.CGACAGTGGTt.A.CTCGGTTCGATTAGAAttttgaatattcctc..........ATCGAAT.GCCG.TC........AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-2 Sc: 45.1 GGAGTAGTG.CGACAGTGGTt.A.CTCGGTTCGATTAGAAtttacaaattcctc...........ATCGAAT.GCCG.TC........AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-3 Sc: 45.1 GGAGTAGTG.CGACAGTGGTt.A.CTCGGTTCGATTAGAAttcagatattcctc...........ATCGAAT.GCCG.TC........AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-4 Sc: 45.1 >>>>>>>...>>>............<<<.>>>>>................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<. GACTTGATGcTCCGAGTGGTt.A.AGGGGCGGGACTTGAAtggatcacgtaatccaagaa.....ATCCCGT.GTCGA.........AAGACGCGCAGGTTCGAACCCTGC.TCAAGTCG tRNA-Ser-TGA-1-1 Sc: 63.0 >>>.>>>...>>>............<<<.>>>>>................................<<<<<..>>>>...........<<<<..>>>>>.......<<<<<.<<<.<<<. GGACTGATA.GCCAAGTGGTcgA.AGGCGCCGTACTTGAA.........................ATACGGTAACGT.GCAA......GCGTTCAGGGGTTCGAATCCTCT.TCATTCCG tRNA-Ser-TGA-2-1 Sc: 47.0 >>>>>>>...>>>............<<<.>>>>>................................<<<<<..>>>>...........<<<<..>>>>>.......<<<<<.<<<<<<<. GATACAGTC.GGATAGTGGTt.A.TTCCGTCACATTGCTAtggttgctctagtaatcagatgaagATGTGGT.GCCT.TC........GGGCGCGTGAGTTCGAATCTCAC.CTGTGTCA tRNA-Ser-GCT-1-1 Sc: 42.3
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>............<<<.>>>>>................................<<<<<....................>>>>>.......<<<<<<<<<<<<. GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAactcgtttagatatcgtcta.....ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-2 Sc: 57.4 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAagaatagcaattgcatttcacta..ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-4 Sc: 57.3 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAaaaatagcaattgcaatccacta..ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-5 Sc: 57.3 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAtgtagagcgttccattcgcttattaATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-1 Sc: 57.2 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAacaagttgttttacaatgtaacta.ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-3 Sc: 57.2 >>>>>.>..>>>>..........<<<<.>>>>>................................<<<<<....................>>>>>.......<<<<<<.<<<<<. GCCCTTGTAGCTCAGG.GGTtA.GAGTATGGCCTTCGTAgtcattacg................AGGTCAGGTTAGg..........GtCCATGGTTCAAATCCATGCTGGGGCA tRNA-Thr-CGT-1-1 Sc: 50.8 >>>.>>>..>>>............<<<.>>>>>................................<<<<<....................>>>>>.......<<<<<<<<.<<<. GCCTCGGTAGTTTAGT.GGTtA.TAATTTTTCACTTGTAgcgtatctacatg............ATGAAAGG...............GtCCTGTGTTCGACTCACAGCCGTGGCA tRNA-Thr-TGT-1-1 Sc: 60.6 >>>>>>>..>>.>..........<.<<.>>>>>................................<<<<<....................>>>>>.......<<<<<<<<<<<<. GCCTGTGTAGTATAGT.GGT.A.GAACGTGGATCTTGTA.........................AATCTGAG...............G.CAGGGGTCCGATTCCTCTCACGGGCA tRNA-Thr-TGT-2-1 Sc: 45.5
Trp tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GGAGCTGTAGTTCAATTGGT.A.GAACGACGGATTCCAActacttttggttgatATCCGTCG...........GtCGCAGGTTCGATTCCTGTCAGCTTCA tRNA-Trp-CCA-1-1 Sc: 68.7 >>>>>>>..>>>>..........<<<<..>>>>......................<<<<.................>>>>>.......<<<<<<<<<<<<. GGAGTCGTAGTTCAGT.GGT.A.GAATATCGGATTCCAAttattggaagt....ATCCGCCG...........GtCGCAGGTTCAATCCCTGTCGACTTCA tRNA-Trp-CCA-2-1 Sc: 59.0 GGAGTCGTAGTTCAGT.GGT.A.GAATATCGGATTCCAAttactggaaat....ATCCGCCG...........GtCGCAGGTTCAATCCCTGTCGACTTCA tRNA-Trp-CCA-2-2 Sc: 58.9 AGGGACGTCGTATAAC.GGTtA.GTATATAGGTTTCCAA...............AACCTCTG...........A.TAGTGGTTCGATTCCGCTCGTCCTTA tRNA-Trp-CCA-3-1 Sc: 33.1
Tyr tRNAs
>>>>>>>...>>>>...........<<<<.>>>>>..............................................<<<<<.......................>>>>>.......<.<<<<.<<<<<<<. CTCTCCGTA.GTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggtttccaaagtcac......................ATCTGAAA..................GtCGTGCGTTCGACTC.GCAC.CGGGGAGA tRNA-Tyr-GTA-1-1 Sc: 53.7 CTCTCCGTA.GTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggttaacaatgtcac......................ATCTGAAA..................GtCGTGCGTTCGACTC.GCAC.CGGGGAGA tRNA-Tyr-GTA-1-2 Sc: 53.7 >>>>>>>...>>>>...........<<<<..>>>>..............................................<<<<...>>>>..........<<<<...>>>>>.......<.<<<<.<<<<<<<. GGGGATGTAaATCTAAT.TGGT..AAGATATCAAACTGTAA.......................................ATTTGCC.GGGTTAC.......GCCCAcTGGGAGTTCAAGTC.TCTC.CGTCCCCA tRNA-Tyr-GTA-3-1 Sc: 35.2 >>>.>.>...>>>>...........<<<<.>>>>>..............................................<<<<<.......................>.>>>.......<.<<.<.<.<.<<<. TCT.CAGTA.GTTTAGTgTGGTatAGAGCGTCAGACTGTAAttatctacaattatctataatcgtctttaagattaggatATCTGAAA..................AtCGTGGGTTTGACTCgCCCC.CGGGAGAT tRNA-Tyr-GTA-2-1 Sc: 22.7
Val tRNAs
>>>>.>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<.<<<<. GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcatcgaatgtctt................CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-1 Sc: 49.9 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttccttgaatgtctt................CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-3 Sc: 49.9 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttttcctgatgtctt................CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-4 Sc: 49.9 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttgtttagatgtctt................CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-5 Sc: 49.9 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcactgaaatgtctt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-2 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAtttgtttggatgtttt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-6 Sc: 49.8 >>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. ATCTCATTGGCTCAGTTGGTtAGAGTGTTCGCTTCACAttaatgataggtcataagatctagtgat...CGCGAAAG...........GtCCCCGGTTCGATCCCGGGATGGGATA tRNA-Val-CAC-1-1 Sc: 70.0 ATCTCATTGGCTCAGTTGGTtAGAGTGTTCGCTTCACAtgattacgagttttaactcgttgctgctgaaCGCGAAAG...........GtCCCCGGTTCGATCCCGGGATGGGATA tRNA-Val-CAC-1-2 Sc: 69.9