Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>.>..>>>>.........<<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAttttctcttctaagattc....TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-2 Sc: 53.5 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAtcttctaaccgaaagattc...TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-3 Sc: 53.5 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAtcttcttcaataggttct....TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-7 Sc: 53.5 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAtctttcgtaatagattctgat.TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-1 Sc: 53.4 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAttttatctcaagttaaaattc.TTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-4 Sc: 53.4 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAttttatcgataaaataagattcTTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-5 Sc: 53.4 GGGGGTGTAGCTCATTTGGCA.GAGCGCGTCATTAGCAttttatcgataaaataagattcTTGACGAG...........GtACTGGGTTCAATTCCCAGCTCCTCCA tRNA-Ala-AGC-1-6 Sc: 53.4 >>>>>.>..>>>>.........<<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGGTGTGGTCAAGG.GGTA.TGACAAGCGATCCGCAtttaggacgctt..........TTCGCTTA...........G.CCTGGGTTCGAGTCCCAGCTCCTCCA tRNA-Ala-CGC-1-1 Sc: 45.5 GGGGGTGTGGTCAAGG.GGTA.TGACAAGCGATCCGCAtgtaggacgctt..........TTCGCTTA...........G.CCTGGGTTCGAGTCCCAGCTCCTCCA tRNA-Ala-CGC-1-2 Sc: 45.5 >>>>>.>..>>>>.........<<<<.>>>>>.............................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGGTGTAGCTCACTTGGTA.GAGCGCGTCATTTGCActgtcgaatacagtaggac...TTGACGAG...........GtACTGAGTTCGATCCTCAGCTCCTCCA tRNA-Ala-TGC-1-1 Sc: 55.3
Arg tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTCCGCGTAGCACAGTGGT.A.GTGCGCTTGACTACGAtttctatattctggatccga........................ATCAAGAG...........GtCGCGATTTCGAATATCGCCGTGGATT tRNA-Arg-ACG-1-1 Sc: 65.1 GTCCGCGTAGCACAGTGGT.A.GTGCGCTTGACTACGAtttcgtcattaattctgataaatcggc.................ATCAAGAG...........GtCGCGATTTCGAATATCGCCGTGGATT tRNA-Arg-ACG-1-2 Sc: 64.9 GTCCGCGTAGCACAGTGGT.A.GTGCGCTTGACTACGAttacgttagcatgtcttgtatcagcaagtgtgccccgaatctgcATCAAGAG...........GtCGCGATTTCGAATATCGCCGTGGATT tRNA-Arg-ACG-1-3 Sc: 64.2 >>>>>>>..>>>>.........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTTCGCATGGTGCAGTGGT.A.GCATATCGCTTTCCGGtggtggtt....................................CGGCGAAG...........AtCATGGGTTCGAACCCCATTGCGAATT tRNA-Arg-CCG-1-1 Sc: 55.1 >>>>>>>...>>>.........<<<..>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt..........................ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-1 Sc: 55.9 GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttc..........................ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-2 Sc: 55.9 GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt..........................ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-3 Sc: 55.9 GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt..........................ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-4 Sc: 55.9 GGGCTTGTGTTGCAGTGGT.A.GCATTCTAGACTTCGAggtcgtgaactggagttt..........................ATCTAGCG...........GtCGCGGGTTCAAATCCCGTCGAGCCTT tRNA-Arg-TCG-1-5 Sc: 55.9 >>>>>>>..>>>...........<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGGCGTGGCCAAATGGTtA.CGGCGTCCGCTTCCTAttaattgattatcaaatcagccggt...................AGCGGGAG...........AtTGTGGGTTCGATCCCCACCGTTGGTT tRNA-Arg-CCT-1-2 Sc: 57.3 GCCGGCGTGGCCAAATGGTtA.CGGCGTCCGCTTCCTAttaaacgattatcaaatcatccggt...................AGCGGGAG...........AtTGTGGGTTCGATCCCCACCGTTGGTT tRNA-Arg-CCT-1-3 Sc: 57.3 GCCGGCGTGGCCAAATGGTtA.CGGCGTCCGCTTCCTAtgacaatcagttaacacctgatccgaa.................AGCGGGAG...........AtTGTGGGTTCGATCCCCACCGTTGGTT tRNA-Arg-CCT-1-1 Sc: 57.2 >>>>>.>..>>>>.........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<.<<<<<. GCCCGTGTGGCCTAATGGTtA.AGGCTTCTGACTTCTAggttacgcaagtgact............................ATCAGAGG...........AtTGTGGGTTCGAGTCCCACCTTGGGCT tRNA-Arg-TCT-1-1 Sc: 67.6
Asn tRNAs
>>>>>>>..>>>>.........<<<<..>>>>......................................................<<<<.................>>>>>.......<<<<<<<<<<<<. TGCCCCGTGGCTGAGTTGGTtACAGCGGTTGACTGTTAgtataatatactaattta.............................ATCAGACG...........GtCCAGAGTTCGAATCTCTGCGGGGCAG tRNA-Asn-GTT-2-1 Sc: 56.7 TGCCCCGTGGCTGAGTTGGTtACAGCGGTTGACTGTTAattaattatccttaataaccctattaaggatgattacgtaatac...ATCAGACG...........GtCGAGAGTTCGAGTCTCTCCGGGGCAG tRNA-Asn-GTT-1-1 Sc: 55.4 TGCCCCGTGGCTGAGTTGGTtACAGCGGTTGACTGTTAgttattaataattaattaatctaattaattactattacgtaatag..ATCAGACG...........GtCGAGAGTTCGAGTCTCTCCGGGGCAG tRNA-Asn-GTT-1-3 Sc: 55.4 TGCCCCGTGGCTGAGTTGGTtACAGCGGTTGACTGTTAgtaaataactgttaattacacaaattaacatttgttacgtaataatgATCAGACG...........GtCGAGAGTTCGAGTCTCTCCGGGGCAG tRNA-Asn-GTT-1-2 Sc: 55.3
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TTCCTGTTCGTATAACGGCtA.GTATGCTCGCTTGTCActggaggattcagttccgcagcgtcCGCGGGAG...........ATCGGAGTTCGATTCTCCGACAGGAAG tRNA-Asp-GTC-1-1 Sc: 36.4
Cys tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GTGGGAGTAGCTCAGTTttGGTtAGAGCAACCGATTGCAAttttatgtcgcaatcATCGGTAG...........GtCGTGGGTTCGAATCCCACTTCCCACT tRNA-Cys-GCA-1-1 Sc: 69.5 GTGGGAGTAGCTCAGTTttGGTtAGAGCAACCGATTGCAAttatttgcaact...ATCGGTAG...........GtCGTGGGTTCGAATCCCATTTCCCACT tRNA-Cys-GCA-2-1 Sc: 66.1 GTGGGAGTAGCTCAGTTttGGTtAGAGCAACCGATTGCAAttttattcgcaatc.ATCGGTAG...........GtCGTGGGTTCGAATCCCATTTCCCACT tRNA-Cys-GCA-2-2 Sc: 66.0
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGCTTCTTAGTATAACGGTtA.GTACATGAGATTCTGA................................TTCTCGTG...........ACCTGGGTTCGACTCCCAGAGAGGCCT tRNA-Gln-CTG-1-1 Sc: 63.8 GGCTTCTTAGTATAACGGTtA.GTACATGAGATTCTGA................................TTCTCGTG...........ACCTGGGTTCGACTCCCAGAGAGGCCT tRNA-Gln-CTG-1-2 Sc: 63.8 GGCTTCTTAGTATAACGGTtA.GTACATGAGATTCTGA................................TTCTCGTG...........ACCTGGGTTCGACTCCCAGAGAGGCCT tRNA-Gln-CTG-1-3 Sc: 63.8 >>>>.>>..>>>>.........<<<<.>>>>>.......................................<<<<<...............>>>>>.......<<<<<<<.<<<<. GGCGACATCGTCTAGTGGTtA.GGACGTTCGGTTTTGAaaggttgcgtggtcatccgcttattttaactgTCCGAACG...........ACCTGGGTTCGAACCCCAGTGACGCCT tRNA-Gln-TTG-1-1 Sc: 55.2 GGCGATATCGTCTAGTGGTtA.GGACGTTCGGTTTTGAtgtcatcatt......................TCCGAGCA...........ACCTGGGTTCGATCCCCAGTAGCGCCT tRNA-Gln-TTG-2-1 Sc: 49.9
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTCAGTAGTATAACGGTtA.GTATAACCGCTTCTCAtttgaagatcaattatcttg...........CGCGGTAG...........ACCAGGGTTCAACTCCCTGCTGGAGAA tRNA-Glu-CTC-1-1 Sc: 48.8 TCTTCAGTAGTATAACGGTtA.GTATAACCGCTTCTCAgatttcaagtcattcttgtttctgtt.....CGCGGTAG...........ACCAGGGTTCAACTCCCTGCTGGAGAA tRNA-Glu-CTC-1-3 Sc: 48.5 TCTTCAGTAGTATAACGGTtA.GTATAACCGCTTCTCAgatttcaagtacagtaattcttgtttctgttCGCGGTAG...........ACCAGGGTTCAACTCCCTGCTGGAGAA tRNA-Glu-CTC-1-2 Sc: 48.3 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtacttggaattccagtctgtg.........CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-4 Sc: 47.1 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtacctagtctttctagtcagtt........CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-1 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtgattggatttatccagttctgtt......CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-2 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtgattggatttatccagttctgtt......CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-3 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtatttgatccgtcaaaactgct........CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-5 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtattcggattctccgattctgtt.......CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-6 Sc: 47.0 TCTTCATTAGTATAACGGTtA.GTATAACCGCTTCTCAgtaattggatttattcggtactgtt......CGCGGTAG...........ACCAGGGTTCAACTCCCTGATGGAGAA tRNA-Glu-CTC-2-7 Sc: 47.0 >>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTCGATAGTACAGGGGTtA.GTATATCCGCTTTTCAggaattaaattccta................CGCGGACG...........ACCCGGGTTCGAATCCCGGTCGGAGAA tRNA-Glu-TTC-2-1 Sc: 59.4 TCTTCGATAGTACAGGGGTtA.GTATATCCGCTTTTCAggaattaaattccta................CGCGGACG...........ACCCGGGTTCGAATCCCGGTCGGAGAA tRNA-Glu-TTC-2-2 Sc: 59.4 TCTTCGATAGTACAGGGGTtA.GTATACCCGCTTTTCAggaactcaacttcccacgg............CGCGGGCG...........ACCCGGGTTCGATTCCCGGTCGGAGAA tRNA-Glu-TTC-1-1 Sc: 58.9
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-2 Sc: 48.5 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-3 Sc: 48.5 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-4 Sc: 48.5 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCA.........................................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-8 Sc: 48.5 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCAttaggtgattt..............................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-5 Sc: 41.2 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCAttaggtgattt..............................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-6 Sc: 41.2 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCAtttggctactt..............................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-7 Sc: 41.2 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCAttaggtgaatt..............................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-9 Sc: 41.2 ACACCGTTGGTGAAACGGT.A.TCATGCATCGTTGCCAtctgagttatcaaggaatgtaaa..................TCGATGCG...........GCAAGGGTTCGACTCCCTTACGGTGTA tRNA-Gly-GCC-1-1 Sc: 40.7 >>>>>>>..>>>>.........<<<<.>>>>>................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. ACGCTGTTGGTGTATTGGT.A.ACATTAGAGCTTCCCAttgtcatcagtggccgtcttcgggcggataat.........TGCTCTAG...........CACGGGGTTCGATTCCCCGACAGCGTA tRNA-Gly-CCC-1-2 Sc: 42.0 ACGCTGTTGGTGTATTGGT.A.ACATTAGAGCTTCCCAttatctgattaatggccactttgtatttaatggtggacaatTGCTCTAG...........CACGGGGTTCGATTCCCCGACAGCGTA tRNA-Gly-CCC-1-1 Sc: 41.7 >>>>>>>..>>>>.........<<<<.>>>>>................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGCTAATCGTCTAGTGGTtA.GGATGGCTCCCTTCCA.........................................AGGAGTCG...........ACCGGCGTTCGAATCGCCGTTGGCGCA tRNA-Gly-TCC-1-1 Sc: 56.3 GCGCTAATCGTCTAGTGGTtA.GGATGGCTCCCTTCCA.........................................AGGAGTCG...........ACCGGCGTTCGAATCGCCGTTGGCGCA tRNA-Gly-TCC-1-3 Sc: 56.3 GCGCTAATCGTCTAGTGGTtA.GGATGGCTCCCTTCCAtgagttca.................................AGGAGTCG...........ACCGGCGTTCGAATCGCCGTTGGCGCA tRNA-Gly-TCC-1-2 Sc: 49.1
His tRNAs
>>>>>>>..>>>...........<<<.>>>>>.................<<<<<...............>>>>>.......<<<<<<<<<<<<. GTCCCTATAGTCTAGTGGTtA.TGACGTAACATTGTGG..........CTGTTGAG...........GCGCCTGTTCGATTCAGGCTAGGGACA tRNA-His-GTG-1-1 Sc: 70.0 GTCCCTATAGTCTAGTGGTtA.TGACGTAACATTGTGG..........CTGTTGAG...........GCGCCTGTTCGATTCAGGCTAGGGACA tRNA-His-GTG-1-3 Sc: 70.0 GTCCCTATAGTCTAGTGGTtA.TGACGTAACATTGTGGagtttgagatCTGTTGAG...........GCGCCTGTTCGATTCAGGCTAGGGACA tRNA-His-GTG-1-2 Sc: 62.7
Ile tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAattaaaatattatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-2 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAattaaaaggttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-3 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAattaaagagttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-4 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAatcattaagttatt...ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-6 Sc: 51.9 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAataaaaacgatttatt.ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-1 Sc: 51.8 GGTCGATTATATCAGTTGGTttA.GATAGTGGAGCTAATAataaaaaagtgttatt.ACTCCAAG...........GtCGGCGGTTCGATCCCGTCATCGATCA tRNA-Ile-AAT-1-5 Sc: 51.8 >>>>>>>..>>>>...........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. TTCCCGTTAACTCAGT.GGTc.A.GAGTAGTGTGCTTATGaggatacagttttatttTCACACCG...........GtCGTGGGTTCAACTCCCACACGGGAAA tRNA-Ile-TAT-1-1 Sc: 54.8
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.........................................<<<<<.>>>..............<<<..>>>>>.......<<<<<.<<<<<<<. GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtaatcgagtattacgtaagaaa............CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-1 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtaatcgagtattacgtaagaat............CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-2 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtgttgttcaacactgaaagcc.............CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-3 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtgttgtacaacactaaaagcc.............CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-4 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtgttgttcaacactgaaagcc.............CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-5 Sc: 51.9 GGCGAGATGTGTGAGTGGTctA.AACAGCTGTCTTAAGGtaaccgagtattacgtaagaaa............CGGCAGTCCTC............CGGGGCGTGGGTTCGAATCCCAC.TCTCGTCA tRNA-Leu-AAG-1-6 Sc: 51.9 >>>>>>>..>>>>..........<<<<.>>>>>.........................................<<<<<.>>................<<..>>>>>.......<<<<<.<<<<<<<. GGCGAAGTGTCCGAGTGGTt.A.TGGAGTGTCGTTCAGGtgtgaaacg.........................CCGGCATGC....TTT.........GCGCGTGGGTTCGAATCCCAC.CTTCGTCA tRNA-Leu-CAG-1-1 Sc: 50.8 >>>>>>>..>>>............<<<.>>>>...........................................<<<<.>>.>............<.<<..>>>>>.......<<<<<.<<<<<<<. GGACAGATGCCCGAGCGGTt.A.AGGGGACGGTCTCAAGtggaatacactttccctgataagggttgaa....ATCCGTTGCGT............AAGCGCGTGAGTTCGAATCTCAC.TCTGTTCA tRNA-Leu-CAA-1-1 Sc: 54.7 GGACAGATGCCCGAGCGGTt.A.AGGGGACGGTCTCAAGtggaatacactttccctgataagggttgaa....ATCCGTTGCGT............AAGCGCGTGAGTTCGAATCTCAC.TCTGTTCA tRNA-Leu-CAA-1-2 Sc: 54.7 GGACAGATGCCCGAGCGGTt.A.AGGGGACGGTCTCAAGtgggatacacactttccgctggtaaggggttgaaATCCGTTGCGT............AAGCGCGTGAGTTCGAATCTCAC.TCTGTTCA tRNA-Leu-CAA-1-3 Sc: 54.5 >>>>>>>..>>>............<<<.>>>>...........................................<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<. GCGGTGTTGACCGAGTGGTt.A.AGGTGTCGGCCTTAAGctagcttcttttgtg...................ATCCGATGGTCGA........GAGACCGCGTGAGTTCGAACCTCAC.ACACCGCA tRNA-Leu-TAA-1-1 Sc: 59.0
Lys tRNAs
>>>.>>>..>>>>.........<<<<.>>>>>.....................................................<<<<<................>>>>>.......<<<<<<<<.<<<. GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-1 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-2 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgagccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-3 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-5 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-6 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAgagtctgcttgaaccggttacgggccatcatctca...........ATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-7 Sc: 71.9 GCCCCCGTGGCGCAATCGGT.AGCGCGCACGACTCTTAacgagtctgcttgagccggttatgggccatcaatcattcattcgtcATCGTGCG...........GtTGCGGGTTCGAGCCCCGCCGGAGGCT tRNA-Lys-CTT-1-4 Sc: 71.5 >>>>>>>..>>>>.........<<<<.>>>>>.....................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTTCGTAGCTGAGTTGGTtACAGCGTCCGACTTTTAagctttcacaagcttat.............................ATCGGGCG...........AtCACGGGTTCGAGCCCCGTCGAAGGCT tRNA-Lys-TTT-1-1 Sc: 68.4
Met tRNAs
>>>>>>>..>>>>........<<<<..>>>...................................<<<.................>>>>>.......<<<<<<<<<<<<. GCCCTCATGGTGTAGTGGTA.ACACGAAGGTCTCATAatatgacgttagcttggttaacggtaATCCTCAG...........C.TCTGAGTTCGATTCTCAGTGAGGGCA tRNA-Met-CAT-1-1 Sc: 59.9 GCCCTCATGGTGTAGTGGTA.ACACGAAGGTCTCATAatatgacgttagcttggttaacggtaATCCTCAG...........C.TCTGAGTTCGATTCTCAGTGAGGGCA tRNA-Met-CAT-1-2 Sc: 59.9 GCCCTCATGGTGTAGTGGTA.ACACGAAGGTCTCATAatatgacgttagcttagttaacggtaATCCTCAG...........C.TCTGAGTTCGATTCTCAGTGAGGGCA tRNA-Met-CAT-1-3 Sc: 59.9 >>>>>>>..>>>>........<<<<.>>>>>.................................<<<<<................>>>>>.......<<<<<<<<<<<<. AACAGCGTAATTCAGAGGAA.GAATGCAAGGCTCATAtttacttgggt...............ACCTTGAA...........GtCGCTGGATCGAAACCAGCCGCTGTTA tRNA-iMet-CAT-1-1 Sc: 45.4 AACAGCGTAATTCAGAGGAA.GAATGCAAGGCTCATAtttactttggt...............ACCTTGAA...........GtCGCTGGATCGAAACCAGCCGCTGTTA tRNA-iMet-CAT-1-2 Sc: 45.4 AACAGCGTAATTCAGAGGAA.GAATGCAAGGCTCATAattatttgttt...............ACCTTGAA...........GtCGCTGGATCGAAACCAGCCGCTGTTA tRNA-iMet-CAT-1-3 Sc: 45.4
Phe tRNAs
>>>>.>>..>>>>........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<.<<<<. GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcattgagaatcaa.....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-1 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcagtaaagaatcaa....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-2 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcatcaggaatcaa.....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-4 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttcatcaggaatcaa.....ATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-5 Sc: 67.4 GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGttccgtaactcgagatttcaATCGTGCG...........GtCCCTGGTTCGATCCCGGGTGGCGCCA tRNA-Phe-GAA-1-3 Sc: 67.2
Pro tRNAs
>>>>>>>..>>>>........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggatttcgcaatccggctt...............TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-1 Sc: 53.7 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattatatttaatccggctt.............TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-2 Sc: 53.7 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattatgtaatccggctt...............TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-3 Sc: 53.7 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattatgtaatccggctt...............TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-6 Sc: 53.7 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattacataacgttctccggctt..........TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-4 Sc: 53.6 GTTTCGTTGGTGCAGTGGTA.GCATGCCCTCTTAGGGttggattacatataatgttctccggctt........TGGGGGTG...........GtCCTCGGTTCAATCCCGGGACGAGACC tRNA-Pro-AGG-1-5 Sc: 53.5 >>>>>>>..>>>>........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTAATAGTGTAATCGTC.GCACGCATCCTTCGGGatcgttagtcttcccgcagcttaaggttgcataattTGGATGTA...........G.TCTGGGTTCAATTCCCAGTTGGGCCC tRNA-Pro-CGG-1-1 Sc: 34.2 >>>>>.>..>>>..........<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGTTTGTAGTGTAGTGGTA.TCGCGCTTCATTTGGGcttcacggagcaccg.....................TTGAAGAG...........GtCCCGCGTTCGATCCGCGGCTGACCCC tRNA-Pro-TGG-1-1 Sc: 51.5
SeC tRNAs
Ser tRNAs
>>>>>>>...>>>...........<<<.>>>>>..................................<<<<<.>>>............<<<..>>>>>.......<<<<<.<<<<<<<. GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAtttcaaattcctc..............ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-2 Sc: 45.2 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttcagataattcctc............ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-1 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttttgaatattcctc............ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-3 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttatgaaattcctc.............ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-4 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttatgaaattcctc.............ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-5 Sc: 45.1 GGAGTAGTG.CGACAGTGGTtA.CTCGGTTCGATTAGAAttttgaatattcctc............ATCGAATGCCG.TC.......AGGCGCGCAGGTTCGAGTCCTGC.CTGCTCCT tRNA-Ser-AGA-1-6 Sc: 45.1 >>>>>>>...>>>...........<<<.>>>>>..................................<<<<<.>>>............<<<..>>>>>.......<<<<<.<<<<<<<. GACTTGATGcTCCGAGTGGTtA.AGGGGCGGGACTTGAAtggatcacgtaatccaagat.......ATCCCGTGTCGA........AAGACGCGCAGGTTCGAACCCTGC.TCAAGTCG tRNA-Ser-TGA-1-1 Sc: 63.0 >>>>>>>...>>>...........<<<.>>>>>..................................<<<<<.>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GATACAGTC.GGATAGTGGTtA.TTCCGTCACATTGCTAtggttgctctggtaatcacagatgaagATGTGGTGCCT.TC.......GGGCGCGTGAGTTCGAATCTCAC.CTGTGTCA tRNA-Ser-GCT-1-1 Sc: 42.3
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>............<<<.>>>>>...................................................................<<<<<....................>>>>>.......<<<<<<<<<<<<. GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAactcgtttagatattgtcta........................................ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-5 Sc: 57.4 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAagaatagcaattgcatttcacta.....................................ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-2 Sc: 57.3 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAagaatagccaattgcatttcgcta....................................ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-1 Sc: 57.2 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAtttagagcgttttttcgcttacta....................................ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-3 Sc: 57.2 GCCTCTATAGTTTAGTTGGCtA.TAACACCCCACTAGTAacaaagttgtttaacaacgtaatta...................................ATGGGGAG...............GtCTGTCGTTCGAATCGGCATGGAGGCA tRNA-Thr-AGT-1-4 Sc: 57.2 >>>>>.>..>>>>..........<<<<.>>>>>...................................................................<<<<<....................>>>>>.......<<<<<<.<<<<<. GCCCTTGTAGCTCAGG.GGTtA.GAGTATGGCCTTCGTAgttaatacg...................................................AGGTCAGGTTAGg..........GtCCATGGTTCAAATCCATGCTGGGGCA tRNA-Thr-CGT-1-1 Sc: 50.8 >>>..>>..>>>>..........<<<<.>>>>>...................................................................<<<<<....................>>.>>.......<<.<<<<..<<<. GCC..CGTGGCGCAATCAGT.A.GCGCGCACGACTCGTAtacgtgagtcgcctggtctgattattagtaggatcctcaagatacatgcttattattatgATCGTGCG...............GtTGC.GGTTCGCGCCCCGCCGGAGGCT tRNA-Thr-CGT-2-1 Sc: 29.7 >>>.>>>..>>>............<<<.>>>>>...................................................................<<<<<....................>>>>>.......<<<<<<<<.<<<. GCCTCGGTAGTTTAGT.GGTtA.TAATTTTTCACTTGTAgcgtatctacatg...............................................ATGAAAGG...............GtCCTGTGTTCGACTCACAGCCGTGGCA tRNA-Thr-TGT-1-1 Sc: 60.6
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GGAGCTGTAGTTCAATTGGTA.GAACGACGGATTCCAActacttttggttgatATCCGTCG...........GtCGCAGGTTCGATTCCTGTCAGCTTCA tRNA-Trp-CCA-1-1 Sc: 68.7 >>>>>>>..>>>>.........<<<<..>>>>......................<<<<.................>>>>>.......<<<<<<<<<<<<. GGAGTCGTAGTTCAGT.GGTA.GAATATCGGATTCCAAttgctggaaat....ATCCGCCG...........GtCGCAGGTTCAATCCCTGTCGACTTCA tRNA-Trp-CCA-2-1 Sc: 58.9 GGAGTCGTAGTTCAGT.GGTA.GAATATCGGATTCCAAatactggaaat....ATCCGCCG...........GtCGCAGGTTCAATCCCTGTCGACTTCA tRNA-Trp-CCA-2-2 Sc: 58.9
Tyr tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>..................................................<<<<<................>>>>>............<<<<<<<.<<<<<. CTCTCCGTAGTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggttaacaacttcac..........................ATCTGAAA...........GtCGTGCGTTCGACT.....CGCACCG.GGGAGA tRNA-Tyr-GTA-1-1 Sc: 53.7 CTCTCCGTAGTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggttacaatatcac...........................ATCTGAAA...........GtCGTGCGTTCGACT.....CGCACCG.GGGAGA tRNA-Tyr-GTA-1-2 Sc: 53.7 CTCTCCGTAGTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggtttccaaagtcac..........................ATCTGAAA...........GtCGTGCGTTCGACT.....CGCACCG.GGGAGA tRNA-Tyr-GTA-1-3 Sc: 53.7 CTCTCCGTAGTTTAGTgTGGTttAGAGCGTCAGACTGTAAttggttaacaatctcac..........................ATCTGAAA...........GtCGTGCGTTCGACT.....CGCACCG.GGGAGA tRNA-Tyr-GTA-1-4 Sc: 53.7 >>>>>.>..>>>>...........<<<<.>>>>>..................................................<<<<<.................>>>>............<<<<.<..<<<<<. TCTCC.GTAGTTTAATgTGGTttAGAGCGTCAGACTGTAAttatctacaattatctacaatcatctttaagattcgttaggatATCTGAAA...........AtCATGGGTTTGACTtgactCCCACCCgGGAGAT tRNA-Tyr-GTA-2-1 Sc: 20.4
Val tRNAs
>>>>.>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<.<<<<. GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcaatcagaatgtctt..............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-1 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcatttggaggtttt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-2 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttgttatagatgtctt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-3 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttgttatagatgtctt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-4 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcactgcaatgtctt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-5 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcattgaatgtcttt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-6 Sc: 49.8 GGTCACGTGATGGAGTTGGTcACCATACCTGTCTAACAttcacacgagtgtctt...............CACAGGAG...........GtCGGCGGTTCGATCCCGCCCGGGATCA tRNA-Val-AAC-1-7 Sc: 49.8 >>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. ATCTCATTGGCTCAGTTGGTtAGAGTGTTCGCTTCACAttaataacaggtcatatgatctgggtgat..CGCGAAAG...........GtCCCCGGTTCGATCCCGGGATGGGATA tRNA-Val-CAC-1-1 Sc: 70.0 ATCTCATTGGCTCAGTTGGTtAGAGTGTTCGCTTCACAtgattacggattttaactcgtggctgctgaaCGCGAAAG...........GtCCCCGGTTCGATCCCGGGATGGGATA tRNA-Val-CAC-1-2 Sc: 69.9