tRNA Gene Summary

Use of uninitialized value in addition (+) at ./analyze-tRNAs2 line 509. Use of uninitialized value in addition (+) at ./analyze-tRNAs2 line 510.
Overview
tRNAs decoding standard 20 AA 46
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 1
Predicted pseudogenes 8
Total tRNAs 55
Intron Summary (tRNAs with introns: 37)
Ala CGC
1
Ala TGC
2
Gly CCC
1
Gly TCC
1
Pro CGG
1
Pro TGG
1
Thr CGT
2
Thr TGT
1
Val AAC
1
Val TAC
1
Ser CGA
1
Ser TGA
1
Ser ACT
1
Arg TCG
1
Arg CCT
2
Arg TCT
1
Leu TAG
1
Leu TAA
1
Phe GAA
1
Asn GTT
1
Lys CTT
2
Lys TTT
2
Asp GTC
2
Glu CTC
1
Glu TTC
1
His GTG
2
Gln CTG
1
Gln TTG
1
Tyr GTA
1
Cys GCA
1
 
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
1
GGC
 
CGC
1
TGC
2
4
GlyACC
 
GCC
1
CCC
2
TCC
2
5
ProAGG
 
GGG
 
CGG
1
TGG
1
2
ThrAGT
2
GGT
 
CGT
2
TGT
1
5
ValAAC
1
GAC
 
CAC
 
TAC
1
2
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
 
GGA
 
CGA
2
TGA
1
ACT
1
GCT
 
 
 
 
 
4
ArgACG
 
GCG
 
CCG
1
TCG
1
 
 
 
 
CCT
2
TCT
1
5
LeuAAG
 
GAG
 
CAG
1
TAG
1
 
 
 
 
CAA
 
TAA
1
3
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
1
 
 
 
 
1
AsnATT
 
GTT
1
 
 
 
 
1
Lys 
 
 
 
CTT
2
TTT
2
4
AspATC
 
GTC
4
 
 
 
 
4
Glu 
 
 
 
CTC
2
TTC
1
3
HisATG
 
GTG
2
 
 
 
 
2
Gln 
 
 
 
CTG
1
TTG
1
2
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
 
GAT
 
 
 
TAT
 
0
iMet/Met 
 
 
 
CAT
2/-
 
 
2
TyrATA
 
GTA
1
 
 
 
 
1
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
1
 
 
 
 
1
Trp 
 
 
 
CCA
2
 
 
2
SelCys 
 
 
 
 
 
TCA
 
0