Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>.>>>....................................................................<<<.<................>>>>>.......<<<<<.<<<<<<<. GGGGTTATAGCTCAGTTGGTA.GAGCGCTTGCTTAGCGtgatcgatttcgata..............................................TGCATGAG...........GtCTTGGGTTCAATTCCCAA.TAACTCCA tRNA-Ala-AGC-1-4 Sc: 64.3 GGGGTTATAGCTCAGTTGGTA.GAGCGCTTGCTTAGCGtaattgctacggca...............................................TGCATGAG...........GtCTTGGGTTCAATTCCCAA.TAACTCCA tRNA-Ala-AGC-1-5 Sc: 64.3 GGGGTTATAGCTCAGTTGGTA.GAGCGCTTGCTTAGCGtaagcactacggtagtt............................................TGCATGAG...........GtCTTGGGTTCAATTCCCAA.TAACTCCA tRNA-Ala-AGC-1-1 Sc: 64.2 GGGGTTATAGCTCAGTTGGTA.GAGCGCTTGCTTAGCGtgatgattcatagttaca...........................................TGCATGAG...........GtCTTGGGTTCAATTCCCAA.TAACTCCA tRNA-Ala-AGC-1-2 Sc: 64.2 GGGGTTATAGCTCAGTTGGTA.GAGCGCTTGCTTAGCGtaatcgaaatttcgata............................................TGCATGAG...........GtCTTGGGTTCAATTCCCAA.TAACTCCA tRNA-Ala-AGC-1-3 Sc: 64.2 >>>>>>>..>>>>.........<<<<.>>>>>....................................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGGATTGTAGTTCAGTTGGTA.GAACGTTTCTTTCGCActccaagaagaagctctctctcgatcaccagagaaaagagttattcgagtcgaaacgcaccTAGAAAAG...........GtCTTGGGTTCAATTCCCAA.CAATTCCA tRNA-Ala-CGC-1-1 Sc: 63.2 GGGATTGTAGTTCAGG.GGTA.GAACGTTTCTTTCGCActcctagaagctcctcgagtttcgggtcgaaacgacac.......................TAGAAAAG...........GtCTTGGGTTCAATTCCCAA.CAATTCCA tRNA-Ala-CGC-2-1 Sc: 59.1 >>>>>>>..>>>>.........<<<<.>>>>>....................................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGGGACATGGCGCAGT.GGTA.GCGCGTCTGCTTTGCAtcttcacaatcgtggaatcaatta.....................................TGCAGAAG...........GtCTGGGGTTCGAAACCCCA.TGTCTCCA tRNA-Ala-TGC-2-1 Sc: 66.9 GGGGATATGGCGCAGT.GGTA.GCGCGTCTGCTTTGCAtactctctcacgaggatcattcg......................................TGCAGAAG...........GtCTGGGGTTCGAAACCCCA.TGTCTCCA tRNA-Ala-TGC-1-1 Sc: 64.7 GGGGATATAGTTTAATTGGAA.AAACTTTGATTTTGCA.............................................................TATCGAC............GtTTCAGGTTCAAATCCTGA.TATCTCCA tRNA-Ala-TGC-3-1 Sc: 44.1
Arg tRNAs
>>>>>>>..>>>..........<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTGCTGGCCCAATGGCA.AGGCGTCTGACTACGA.........................ATCAGGAG...........AtTGCAGGTTCGATCCCTGCGTAGGTCA tRNA-Arg-ACG-1-1 Sc: 72.0 GGCCTACTGGCCCAATGGCA.AGGCGTCTGACTACGA.........................ATCAGGAG...........AtTGCAGGTTCGATCCCTGCGTAGGTCA tRNA-Arg-ACG-2-1 Sc: 71.7 >>>>>>>..>>>>........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCACGTTTAGCTCAAAGGTA.GAGCGTCTTATTACGA.........................ATGAGATG...........GtTATTTGTTCAAATCAAATAACGTGAT tRNA-Arg-ACG-3-1 Sc: 59.6 >>>>>>>..>>>>........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTACCGTGGCCTAATGGCA.AGGCATCGCTTTCCGG.........................TGGCGGAG...........AtTGCGCGTTCGAGTCGCGTCGGTATCG tRNA-Arg-CCG-1-1 Sc: 46.6 >>>>>>>..>>>>........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCGCGTGGCCTAATGGCA.AGGCGTCAGTTTTCGGtattcagcttcggccggatgtcatcCACTGAAG...........AtTGCGAGTTCGATCCTCGTCGCGATCA tRNA-Arg-TCG-1-1 Sc: 54.0 GGTCGCGTGGCCTAATGGCA.AGGCGTCAGTTTTCGGtaatcaaccacggttgaatgtcatcCACTGAAG...........AtTGCGAGTTCGATCCTCGTCGCGATCA tRNA-Arg-TCG-1-2 Sc: 54.0 >>>>>>>..>>>>........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCACTTGGCGCAATGGTA.GCGCGTTGCTCTCCTA.........................AAGCAGAG...........GtTGTAGATTCGAGTTCTACAGTGGTCG tRNA-Arg-CCT-1-1 Sc: 63.9 >>>>>>>..>>>>........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCTGCTGGCGCAATGGTA.GCGCGCAGGACTTCTA.........................ATCCTGAG...........GcTGTGGGTTCGAGTCCCACGTAGAGTG tRNA-Arg-TCT-1-1 Sc: 80.8 GCTCTGCTGGCGCAATGGTA.GCGCGCAGGACTTCTA.........................ATCCTGAG...........GcTGTGGGTTCGAGTCCCACGTAGAGTG tRNA-Arg-TCT-1-2 Sc: 80.8 GTCCTATTAGCTTAATGGTA.AAGCAAAATACTTCTA.........................ATATTTTA...........A.TTCAAGTTCAAATCTTGAATAGGATT tRNA-Arg-TCT-2-1 Sc: 46.3
Asn tRNAs
.>>>>.>...>>>>...........<<<<.>>>>>.........................................<<<<<.................>>>>>.......<<<<<<.<<<<.. AGACCTGTtGGTGTACTCGGTttA.ACATATCCGCCTATTA..................................TGCGGAAGT...........A.GCATGGTTCGAATCCATGTCGGTCCA tRNA-Asn-ATT-1-1 Sc: 32.1 >>>>>>>...>>>>...........<<<<.>>>>>.........................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GGCGCTAT.GGCGCAATTGGTt.A.GCGCGTTCGGCTGTTAacttctcagattcgaaagattctgagtaaccgcgACCGAGAG............GtTGTAAGTTCGATCCTTACTAGCGCCG tRNA-Asn-GTT-1-1 Sc: 72.8 GGTGGTAT.GGCGCAATTGGTt.A.GCGCATTCGGCTGTTAcgagctcgattcattcaagctgagca........ACCGAAAG............GtTGTAAGTTCGATCCTTACTATCACCG tRNA-Asn-GTT-3-1 Sc: 70.7 GGTGGTAT.GGCGCAATTGGTt.A.GCGCATTCGGCTGTTAcgtgcccgagtaactcgggttaagca........ACCGAAAG............GtTGTAAGTTCGATCCTTACTACTACCG tRNA-Asn-GTT-2-1 Sc: 69.5 >>>.>>>...>>>>...........<<<<.>>>>>.........................................<<<<<.................>>>>>.......<<<<<<<<.<<<. GTCGCCAT.AGCTCAAC.GGT..A.GAGCAGAATACTGTTA..................................ATATTTTG............A.TAGATGTTCGAGTCATCTTGGGGACT tRNA-Asn-GTT-4-1 Sc: 50.0 >>>>>>>...>>>>...........<<<<.>>>>...........................................<<<<.................>>>>>.......<<<<<<<<<<<<. GGCCTCGT.GGTGTACTTGGTt.C.GCATATCCCATCGTTAgtattcattctaaactctttg.............A.GGGAAG............A.TACAGGTTCAAATCCTGTCGGGGCCC tRNA-Asn-GTT-5-1 Sc: 26.2
Asp tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTCGAATGGTCCAGTGGTcA.AGATTCCCGCCTGTCACGCGGGCG...........ACCGGGGTTCGATTCCCCGTTCGAGAG tRNA-Asp-GTC-1-1 Sc: 69.2 TCTCAGATCGTCCAGTGGTcA.AGATTTCCGCCTGTCACGCGGGAG...........ACCGGGGTTCGATTCCCCGTCTGAGAG tRNA-Asp-GTC-2-1 Sc: 64.2 TCTCAGATCGTCCAGTGGTcA.AGATTTCCGCCTGTCACGCGGGAG...........ACCGGGGTTCGATTCCCCGTCTGAGAG tRNA-Asp-GTC-2-2 Sc: 64.2 TCTCAGATCGTCCAGTGGTcA.AGATTTCCGCCTGTCACGCGGGAG...........ACCGGGGTTCGATTCCCCGTCTGAGAG tRNA-Asp-GTC-2-3 Sc: 64.2 TCTCAGATCGTCCAGTGGTcA.AGATTTCCGCCTGTCACGCGGGAG...........ACCGGGGTTCGATTCCCCGTCTGAGAG tRNA-Asp-GTC-2-4 Sc: 64.2
Cys tRNAs
>>>>>>>..>>>>.........<<<<..>>>>......................<<<<.................>>>>>.......<<<<<<<<<<<<. GTCTGCGTAGCTCAGTGGTAt.GAGCAGAGGATTGCAGcgagtagctaatattATCCTAAG...........GtCACCTGTTCGATCCAGGTCGTAGACT tRNA-Cys-GCA-1-1 Sc: 55.5 GTCTGCGTAGCTCAGTGGTAt.GAGCAGAGGATTGCAGcaagtagctaatattATCCTAAG...........GtCACCTGTTCGATCCAGGTCGTAGACT tRNA-Cys-GCA-1-2 Sc: 55.5
Gln tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>..........................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTGTATGGTGTAGT.GGTtA.GCACTCCAGATTCTGAttgcgagac..........................TTCTGGCG...........ACTTGGGTTCAATTCCCAATACGACCT tRNA-Gln-CTG-2-1 Sc: 60.7 GGTTGTATGGTGTAGT.GGTtA.GCACTTCGGATTCTGAtcttcattagatac.....................TTCCGGCG...........ACTTGGGTTCAATTCCCAATACGACCT tRNA-Gln-CTG-1-1 Sc: 58.8 >>>>>>>..>>>............<<<.>>>>>..........................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTGAATAGTGTAGTTGGTtA.TCACATCGGATTTTGAttagtgcttagagagggtgcttacaaaac......TTCCGGTG...........ACCTGGGTTCGAATCCCGGTTCGACCT tRNA-Gln-TTG-1-1 Sc: 64.2 GGTTGAATAGTGTAGTTGGTtA.TCACATCGGATTTTGAttcggcctccgggctctccaggcctcttcgaaagaTTCCGGGA...........ACTTGGGTTCGAATCCCAGTTCGACCT tRNA-Gln-TTG-2-1 Sc: 55.1
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGAATTGGTCCAGC.GGTtA.GGATCTCCCGCTCTCAagaagagagcaacatactgcg..........CCGGGAAG...........GCCCGGGTTCGACTCCCGGATTCGGAA tRNA-Glu-CTC-1-1 Sc: 61.1 TCCGAATTGGTCCAGC.GGTtA.GGATCTCCCGCTCTCAttacgagagcgtaacatgcg...........CCGGGAAG...........GCCCGGGTTCGACTCCCGGATTCGGAA tRNA-Glu-CTC-1-2 Sc: 61.1 TCCGAATTGGTCCAGC.GGTtA.GGATCTCCCGCTCTCAttacgagagcgtcaaacagcg..........CCGGGAAG...........GCCCGGGTTCGACTCCCGGATTCGGAA tRNA-Glu-CTC-1-3 Sc: 61.1 >>>>>>>..>>>>..........<<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGATATGGTGTAGT.GGCtA.ACATCGCTCGCTTTCAattcgattcctcccaagaatcggaatggta.CCGAGCAG...........CCCCGGGTTCGATTCCCGGTGTCGGAA tRNA-Glu-TTC-1-1 Sc: 50.4 TCCGATATGGTGTAGT.GGCtA.ACATCGCTCGCTTTCAattcgattctgtaaatctgattgaagttc..CCGAGCAG...........CCCCGGGTTCGATTCCCGGTGTCGGAA tRNA-Glu-TTC-1-2 Sc: 50.4 TCCGATATGGTGTAGT.GGCtA.ACATCGCTCGCTTTCAattcgcttcccagctaagaatcgaagcggtaCCGAGCAG...........CCCCGGGTTCGATTCCCGGTGTCGGAA tRNA-Glu-TTC-1-3 Sc: 50.4 >>>>>>>..>>>............<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGCTCAATGGTCAAATAGGTtA.AGACATAGTACTTTCA...............................CTACTAGG...........GTGGGGATTCGAGCTCCCCTTGAGCTA tRNA-Glu-TTC-2-1 Sc: 43.5
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>............................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTTTGTGGTTTAGTGGT.A.AAATTCGTCGTTGCCAttcaatgata...........TCGACGAG...........CCCCGGGTTCAATTCCCGGCGGACGCA tRNA-Gly-GCC-2-2 Sc: 58.9 GCGTTTGTGGTTTAGTGGT.A.AAATTCGTCGTTGCCAttcaataatgata........TCGACGAG...........CCCCGGGTTCAATTCCCGGCGGACGCA tRNA-Gly-GCC-2-1 Sc: 58.8 GCGTTTGTGGTTTAGTGGT.A.AAATTGATCGTTGCCAagctacaagcacagta.....TCGATCAG...........CCCCGGGTTCGATTCCCGGCGGACGCA tRNA-Gly-GCC-1-1 Sc: 54.0 GCGTTTGTGGTTTAGTGGT.A.AAATTGATCGTTGCCAagctacaagcacagta.....TCGATCAG...........CCCCGGGTTCGATTCCCGGCGGACGCA tRNA-Gly-GCC-1-2 Sc: 54.0 GCGTTTGTGGTTTAGTGGT.A.AAATTGATCGTTGCCAagctacaagcacagta.....TCGATCAG...........CCCCGGGTTCGATTCCCGGCGGACGCA tRNA-Gly-GCC-1-3 Sc: 54.0 >>>>>>>..>>>...........<<<.>>>>>............................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCTGCTGTGGTCTAGCGGT.A.TGATGTTCGTTTCCCAccgagtgtgtaactcggaattTGCGGACG...........ATCCGGGTTCGACTCCCGGCGGCAGCA tRNA-Gly-CCC-1-1 Sc: 52.9 >>>>>>>..>>>>.........<<<<.>>>>>............................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCATCATTGGTCTAATGGTtA.GGATTGCTGCCTTCCAtattctgta............AGCAGCCG...........GTTCGGGTTCGATTCCCGAATGATGCA tRNA-Gly-TCC-1-1 Sc: 55.7 GTGGCTATAGGTTAATGGT.A.GACTGATCAGCTTCCA.....................CCTGATTT...........GTGCTGATTCGATTTCAGCTAGCCACA tRNA-Gly-TCC-2-1 Sc: 41.4
His tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGACATAGTATAGT.GGTtA.GTACGTATCGTTGTGGattccgaaaggtcatacgctcCCGATACA...........G.CCTCAGTTCGATTCTGGGTGTCGGCA tRNA-His-GTG-2-1 Sc: 51.5 GCCGGTATCGTATAGT.GGTtA.GTACGTATCGTTGTGGattccgaaaggtcaaacactcCCGATACA...........A.CCTCAGTTCGATTCTGAGTGCCGGCA tRNA-His-GTG-1-1 Sc: 46.0 GAGGATATAGTTCAATAGGT.A.GAACGACTGTATGTGG.....................CATAGTAT...........GtTCCCTGTTCAAATCAGGGTATCCTCC tRNA-His-GTG-3-1 Sc: 39.0
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCCCATAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA.....................................ACGCGAAG...........GcCGCGAGTTCGACCCTCGTTGGGACCA tRNA-Ile-AAT-2-2 Sc: 81.8 GGTCGCTTAGCTCAGTCGGTtA.GAGCGTGGTGCTAATA.....................................ACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGACCA tRNA-Ile-AAT-1-1 Sc: 77.2 GGTCCCATAGCTCAGTTGGTtA.GAGCGTCGTGCTAATAtgaggagcttctcctgcttaata..............ACGCGAAG...........GcCGCGAGTTCGACCCTCGTTGGGACCA tRNA-Ile-AAT-2-1 Sc: 74.0 >>.>>>>..>>>>..........<<<<.>>>>..............................................<<<<................>>>>>.......<<<<<<<<<.<<. AGCCCAATAACTCAGT.GGTtA.GAGTGTCGTTCTTATAtggggaatctggtgcaaatcagcttcatgtgcaggaaATGCGAAG...........GcCGCGGGTTCGAATCCCGCTTGGACTA tRNA-Ile-TAT-1-1 Sc: 62.7
Leu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.........................................<<<<<..>>>>..........<<<<..>>.>>>.......<<<.<<.<<<<<<<. GGTGAGATGGCCGAGTTGGTctA.TGGCGCCAGG...TTAAGGttataccttaacaagtgaca..........T.CCTGGT.ACGGGAAA......CCGTGCGT.GGGTTCGAATCCC.AC.TCTCATCA tRNA-Leu-AAG-1-1 Sc: 65.4 GGTGAGATGGCCGAGTTGGTctA.TGGCGCCAGG...TTAAGGttataccttaacaagtgaca..........T.CCTGGT.ACGGGAAA......CCGTGCGT.GGGTTCGAATCCC.AC.TCTCATCA tRNA-Leu-AAG-1-2 Sc: 65.4 GGTGAGATGGCCGAGTTGGTctA.TGGCGCCAGG...TTAAGGttataccttaacaagtgaca..........T.CCTGGT.ACGGGAAA......CCGTGCGT.GGGTTCGAATCCC.AC.TCTCATCA tRNA-Leu-AAG-1-3 Sc: 65.4 >>>>>>>..>>>.............<<<.>>>>>.........................................<<<<<..>>..............<<..>>.>>>.......<<<.<<.<<<<<<<. GGCAACGTGGCCGAGT.GGTctA.AGGCGCTGTG...TTCAGGcgaatcgatctgattggttgattttcagtaT.CGCAGT.GGGA..........AACCGCAA.GGGTTCGAATCCC.TT.CGTTGTCA tRNA-Leu-CAG-1-1 Sc: 59.3 >>>>>>>..>>>>...........<<<<.>>>>>.........................................<<<<<...>>............<<...>>.>>>.......<<<.<<.<<<<<<<. GGCAGCTTGGCCGAGT.GGTt.A.TGGCGCAGGT...TTTAGGcctctatggcagatt...............C.ACCTGT.TTC.TTT........GATTCGT.GGGTTCGAATCCC.AC.AGCTGTCA tRNA-Leu-TAG-1-1 Sc: 54.3 >>>>.>>..>>>>...........<<<<..>>>>.........................................<<<<.......................>>.>>>.......<<<.<<.<<.<<<<. GGCCTAGTAGTGTAAT.GGT..A.ACGCGACCACgaa.TAGGA..............................T.GTGGAGG..................ATGAtGGGTTCGAGTCCCgTC.CTTGGCCA tRNA-Leu-TAG-2-1 Sc: 24.7 >>>>>>>..>>>>...........<<<<.>>>>>.........................................<<<<<..>>>>..........<<<<..>>.>>>.......<<<.<<.<<<<<<<. GGCATCTTGTCCGAGT.GGTt.A.TGGAGTTGGT...TTTAAGtcatgtttgtcgaacaaacttaaacta...C.ACCAAT.GCTCGAAA......GAGCGCGC.GCGTTCGAACCGC.GC.AGATGTCA tRNA-Leu-TAA-1-1 Sc: 52.1
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTAGCTCAATCGGTAGAGCGTCAGACTCTTAggaagctcctgcg.........................ATCTGAAG...........GcTGCGGGTTCGACCCCCGCATTGGGCT tRNA-Lys-CTT-1-1 Sc: 77.8 GCCCGGTTAGCTCAATCGGTAGAGCGTCAGACTCTTAgggcatcctgcg..........................ATCTGAAG...........GcTGCGGGTTCGACCCCCGCATTGGGCT tRNA-Lys-CTT-1-2 Sc: 77.8 GCCCGGCTAGCTCAATCGGTAGAGCGTAAGACTCTTAtatcttaggat...........................ATCTTAAG...........GcTGCGAGTTCGAGCCTCGCGTTGGGCT tRNA-Lys-CTT-2-1 Sc: 74.7 GCCTGGCTAGCTCAATCGGTAGAGCGTAAGACTCTTAtatcttaggat...........................ATCTTAAG...........GcTGCGAGTTCGAGCCTCGCGTTGGGCT tRNA-Lys-CTT-3-1 Sc: 73.3 >>>>>>>..>>>>........<<<<.>>>>>.............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCTCCTAGCTCAATCGGAAGAGCGTGGGACTTTTAagcattgttctcactagacaatgttcaaagtca.....ATCCCAAG...........GtCGTGAGTTCGAGCCTCACGGAGGGCG tRNA-Lys-TTT-1-1 Sc: 75.8 GCCCTCCTAGCTCAATCGGAAGAGCGTGGGACTTTTAagaaatcgcttctggctcagtgcgagaaccttaagttaATCCCAAG...........GtCGTGAGTTCGAGCCTCACGGAGGGCG tRNA-Lys-TTT-1-2 Sc: 75.6 >>>>>>>..>>>>........<<<<..>>>>.............................................<<<<.................>>>>>.......<<<<<<<<<<<<. GAGTTCTTAGCTCAATAGGTAGAGCATATGACTTTTA......................................ATCATTGT...........GtTAGGGGTTCGATTCCCCTAGAACTCT tRNA-Lys-TTT-2-1 Sc: 58.3
Met tRNAs
>>>>>>>..>>>............<<<.>>>>...........................................<<<<................>>>>>.......<<<<<<<<<<<<. GCCTTCTTGGTGTAGTTGGTtA.TCACGTGAGTCTCATAtctcgcatatgacaggcttaaaacagcctgagcgATCTCGAG...........GtCATCAGTTCGATCCTGATAGAGGGCA tRNA-Met-CAT-1-1 Sc: 66.6 >>>>>>>..>>>>..........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGCATCGTGGCGCAGT.GGA.A.GCGCGCCGGGCTCATA..................................ACCCGGAG...........GcCAACAGATCGAAACTGTTCGATGCTA tRNA-iMet-CAT-1-1 Sc: 65.4 AGCATCGTGGCGCAGT.GGA.A.GCGCGCCGGGCTCATA..................................ACCCGGAG...........GcCAACAGATCGAAACTGTTCGATGCTA tRNA-iMet-CAT-1-2 Sc: 65.4 AGCATCGTGGCGCAGT.GGA.A.GCGCGCCGGGCTCATA..................................ACCCGGAG...........GcCAACAGATCGAAACTGTTCGATGCTA tRNA-iMet-CAT-1-3 Sc: 65.4 >>>>>>>..>>>............<<<.>>>>...........................................<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCTTTGGTGTAGTTGGTtA.TCACGTGAGTCTCATAtctcgaatatgacgggtttaagcaacctgaaggcATCTCAAG...........GtCAGCAGTTCGATCCTGCTAAGGAGCA tRNA-Met-CAT-2-1 Sc: 64.9 >>>>>.>..>>>>..........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<.<<<<<. AGCATCGTGGCGCAGT.GGA.A.GCGCGCTGGGCTCATA..................................ACCCGGAG...........GcCAACAGATCGAAACTGTTCAATGCTA tRNA-iMet-CAT-2-1 Sc: 54.3 .>>>>>>..>>>>..........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<.. CGCGGATTGGTGTACTTGGT.A.ACATAACTGGCTCATG..................................CCCAGTAG...........A.GAAAGGTTCAAATCCTTTGTCCGCAT tRNA-Met-CAT-3-1 Sc: 35.0 >>>.>>>..>>>>..........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<.<<<. GCCTGGATAGTTCAAA.GGTtA.GAACATTAATTTCATA..................................CATTAATA...........A.TGAGAATTCGAGTTTCTCTCCCGGCT tRNA-Met-CAT-4-1 Sc: 35.0
Phe tRNAs
>>>>.>>..>>>>.........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<.<<<<. GCGGGTTTAGCTCAGTT.GGGAGAGCGTCAGACTGAAGccaaacttcaatcattaaATCTGAAG...........GtCGTGTGTTCGATCCACACAAACCGCA tRNA-Phe-GAA-2-1 Sc: 67.9 GCGGGTTTAGCTCAGTT.GGGAGAGCGTCAGACTGAAGtcaaacttcaatcactaaATCTGAAG...........GtCATGTGTTCGATCCACATAAACCGCA tRNA-Phe-GAA-1-1 Sc: 65.7 >>>>>>>..>>>>.........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCAAGAAGCTCAATTtGGTGGAGCGGAACACTGAAG..................ATGTTTAG...........GcTGTAAGTTCAAATCTTATCTTGAGCA tRNA-Phe-GAA-3-1 Sc: 51.0
Pro tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGACTGTGGTTTAGTGGTA.TAATTCTCGCTTAGGGatacctaagttcaaaat...............TGCGAGAG...........GtCCCAGGTTCGATCCCTGGCAGTCGCC tRNA-Pro-AGG-1-1 Sc: 64.4 GCGACTGTGGTTTAGTGGTA.TAATTCTCGCTTAGGGatacctaagttcaaaat...............TGCGAGAG...........GtCCCAGGTTCGATCCCTGGCAGTCGCC tRNA-Pro-AGG-1-2 Sc: 64.4 >>>>>>...>>>>........<<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<.<<<<<<. GCCTGTTTAGTTCAGTGGTA.GAATTCTCGCTTCGGGtgttataacctccatctttagggatggataagTGTGAGAG...........GtCCCAGGTTCGAACCCTGGTACAGGCC tRNA-Pro-CGG-1-1 Sc: 55.3 >>>>>>>..>>>..........<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTTGATGGTCTAGTGGTA.TGATTCTCGCTTTGGGttgcatcagcaatacaattc............TGCGAGAG...........GcCCCGTGTTCGATCCACGGTCAAGCCC tRNA-Pro-TGG-1-1 Sc: 63.1 GGCTTGATGGTCTAGTGGTA.TGATTCTCGCTTTGGGttgcatcagcaatacaattc............TGCGAGAG...........GcCCCGTGTTCGATCCACGGTCAAGCCC tRNA-Pro-TGG-1-2 Sc: 63.1 GGCTTGATGGTCTAGTGGTA.TGATTCTCGCTTTGGGttgcaatcagcaaatcaattc...........TGCGAGAG...........GcCCCGTGTTCGATCCACGGTCAAGCCC tRNA-Pro-TGG-1-3 Sc: 63.1
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>...........<<<.>>>>>................................<<<<<..>>>>.........<<<<....>>>>>.......<<<<<.<<<<<<<. GTCGCTGTGGCCGAGTGGTtA.AGGCGATTGA....CTAGAAttctcctttctagact.....ATCAATT.CCTTTC.......GGGGG..CATAGGTTCGAGTCCTAT.CGGCGACG tRNA-Ser-AGA-1-3 Sc: 70.1 GTCGCTGTGGCCGAGTGGTtA.AGGCGATTGA....CTAGAAttctacggttctagatc....ATCAATT.CCTTTC.......GGGGG..CATAGGTTCGAGTCCTAT.CGGCGACG tRNA-Ser-AGA-1-1 Sc: 70.0 GTCGCTGTGGCCGAGTGGTtA.AGGCGATTGA....CTAGAAcgcgctttgcattccagtt..ATCAATT.CCTTTC.......GGGGG..CATAGGTTCGAGTCCTAT.CGGCGACG tRNA-Ser-AGA-1-2 Sc: 70.0 >>>>>>>..>>>...........<<<.>>>>..................................<<<<.......................>>>>>.......<<<<<.<<<<<<<. AGCCGCGTGGTGTAATGGC.A.TCACACTCCT....GCGGAA.....................ATGGAGAG.................AttTATAGGTTCAAATCCTAT.CGTGGCTC tRNA-Ser-GGA-1-1 Sc: 38.0 >>>>>>>..>>>...........<<<.>>>>>................................<<<<<..>>>>.........<<<<....>>>>>.......<<<<<.<<<<<<<. GTCAGCGTGGCCGAGTGGTtA.AGGCGTTTGA....CTCGAAttctcctctgagttggac...ATCAAAT.GGGTTC.......GCCCG..CACAGGTTCGAATCCTGT.CGCTGACG tRNA-Ser-CGA-1-1 Sc: 77.6 >>>>>>>..>>>...........<<<.>>>>>................................<<<<<..>>>>.........<<<<....>>>>>.......<<<<<.<<<<<<<. GCTGCTATGACCGAGTGGTtA.AGGTGCGAGA....CTTGAAcggcttcccagctgccatgttATCTCGT.GGGTTC.......GCCCG..CAGAGGTTCGATCCCTCT.TGGCAGCG tRNA-Ser-TGA-1-1 Sc: 67.9 >>>>>>>..>>>>.........<<<<.>>>>..................................<<<<.......................>>>>>.......<<<<<.<<<<<<<. GGCTGTATAGTGCAATGACtA.GCATTCTCCAcagcCTACTAttctg................A.GGAGAG.................A..TGTCGGTTCAAATCCGAC.TGCGGCCC tRNA-Ser-ACT-1-1 Sc: 31.3 >>>>>>>..>>>...........<<<.>>>>>................................<<<<<..>>>>.........<<<<....>>>>>.......<<<<<.<<<<<<<. GGCACTTTGGCGGAGTGGTtA.ACGCGCCAGC....CTGCTA.....................AGCTGGT.ACCCTC.......GGGTG..CGTGAGTTCGAATCTCAC.AGGTGTCG tRNA-Ser-GCT-2-1 Sc: 76.9 GGCACTTTGGCGGAGTGGTtA.ACGCGCCAGC....CTGCTA.....................AGCTGGT.ACCTTC.......GGGTG..CGTGAGTTCGAATCTCAC.AGGTGTCG tRNA-Ser-GCT-1-1 Sc: 74.1 GGCACTTTGGCGGAGTGGTtA.ACGCGCCAGC....CTGCTA.....................AGCTGGT.ACCTTC.......GGGTG..CGTGAGTTCGAATCTCAC.AGGTGTCG tRNA-Ser-GCT-1-2 Sc: 74.1
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.........................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCTATAGCTCAGTTGGTA.GAGCGCGACACTAGTA................................................................................A..TGTCGAG...........GtCTACGGTTCAAATCCGTATGGGAGCA tRNA-Thr-AGT-1-2 Sc: 78.9 GCTCCTATAGCTCAGTTGGTA.GAGCGCGACACTAGTA................................................................................A..TGTCGAG...........GtCTACGGTTCAAATCCGTATGGGAGCA tRNA-Thr-AGT-1-3 Sc: 78.9 GCTCCTATAGCTCAGTTGGTA.GAGCGCGACACTAGTAtcgctattcaatcgcggca.............................................................A..TGTCGAG...........GtCTACGGTTCAAATCCGTATGGGAGCA tRNA-Thr-AGT-1-4 Sc: 71.3 GCTCCTATAGCTCAGTTGGTA.GAGCGCGACACTAGTAgtcatctgcaggtggaaaggttgagaa.....................................................A..TGTCGAG...........GtCTACGGTTCAAATCCGTATGGGAGCA tRNA-Thr-AGT-1-1 Sc: 71.0 >>>>.>>..>>>>.........<<<<.>>>>...........................................................................................<<<<................>>>>>.......<<<<<<<.<<<<. GCGGGTTTAGCTCAGTTGGGA.GAGCGTCAG...GTCAgttgcgataccgcatcctcactatcacacgagtccacagtactaaccctcgaatagactgaagtccacttcaatcaataaA..TCTGAAG...........GtCGTGTGTTCGATCCACACAAACCGCA tRNA-Thr-AGT-3-1 Sc: 48.2 GCGGGTTTAGCTCAGTTGGGA.GAGCGTCAG...GTCAgttctttgcaattacatttcacaccagttcatatttactaacttctagacagactgaagtccacttcaatcattaa....A..TCTGAAG...........GtCGTGTGTTCGATCCACACAAATCGCA tRNA-Thr-AGT-2-1 Sc: 45.8 >>>>>.>..>>>>.........<<<<.>>>>>.........................................................................................<<<<<................>>>>>.......<<<<<<.<<<<<. GCTCGTATAGCTCAGC.GGTA.GAGCGTCTCACTCGTAtccagctccggcggattgagtgtgat......................................................A..TGAGAAG...........GtCCTAGGTTCAAGTCCTAGTTCGAGCA tRNA-Thr-CGT-1-1 Sc: 75.8 >>>>>>>..>>>>.........<<<<.>>>>>.........................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCTATAGCTTAGT.GGTA.GAGCGTTGCACTTGTActcctttaaaggatgac...............................................................A..TGCAGAG...........GtCGTTTGTTCAATCCAGACTGGAGGCA tRNA-Thr-TGT-1-1 Sc: 70.5 GCCTCTATAGCTTAGT.GGTA.GAGCGTTGCACTTGTActtccttccaggatgtc...............................................................A..TGCAGAG...........GtCGTTTGTTCAATCCAGACTGGAGGCA tRNA-Thr-TGT-1-2 Sc: 70.5
Trp tRNAs
>>>.>>>>..>>>>........<<<<.>>>>>.....................................<<<<<....................>>>>>.......<<<<.<<<<<.<<<. GAC.TGGTTGGCGCAACGGTA.GCGCGTTCGA...CTCCAGgcatccaatttcggatgctagta....ATCGAAAG...............GcTAGGCGTTCAAATCGCC.TACTG.GTCA tRNA-Trp-CCA-1-1 Sc: 62.4 GAC.TCATTGGCGCAACGGTA.GCGCGTTCGA...CTCCAGaggactttgaaataccaggttcgtgtaATCGAAAG...............GcTAAGCGTTCAAATCGCT.TATGG.GTCA tRNA-Trp-CCA-2-1 Sc: 61.6 GAC.TGATTGGCGCAACGGTA.GCGCGTTCGA...CTCCAGagaactttgaaatatcaagttcgtgaaATCGAAAG...............GcTGGGCGTTCGAATCGCT.CATTG.GTCA tRNA-Trp-CCA-3-1 Sc: 60.4 >>>.>>>>..>>.>........<.<<.>.>>.......................................<<.<...>...........<....>>>>>.......<<<<.<<<<<.<<<. GCCcGTTGTGGTGTAATGGTA.AAACACACGAtatCTCCAAgaacttgggtttatcaaaga.......A.TGAGAGCGCA.......AACAA.TGTGGGTTCAAATCCCAcCCAACaGGCG tRNA-Trp-CCA-4-1 Sc: 25.5
Tyr tRNAs
>>>>>>>..>>>............<<<..>>>>.......................................................................................................<<<<.................>>>>>........<<<<<<<<<<<<. CCCTCGATGGTGTAGTTGGT.A.TCACAACAGGCTGTAAaagtcttcggataacctccgaaaatagta...................................................................ACCTGCAG...........GtCACCAG.TTCGAATCTGGTTCGAGGGA tRNA-Tyr-GTA-1-1 Sc: 62.8 >>>>>>>..>>>............<<<.>>>>>.......................................................................................................<<<<<................>>>>>........<<<<<<<<<<<<. GCGTCTGTAGTGTAAC.GGTtA.TCATCATTGCCTGTAAgttccaaactacaaaaaatgcattacgcagacgccaattctaacatcgttccttagtcca....................................AGCAATAG...........A.CCCGGG.TTCGACTCCCGGCGGACGCA tRNA-Tyr-GTA-2-2 Sc: 56.0 GCGTCTGTAGTGTAAC.GGTtA.TCATCATTGCCTGTAAgttgcaaaactacaataaatacaccacagcagacctcagttctaactcgaatcctctagtcca.................................AGCAATAG...........A.CCCGGG.TTCGACTCCCGGCGGACGCA tRNA-Tyr-GTA-2-1 Sc: 55.9 >>>>>>>..>>>............<<<..>.>.........................................................................................................<.<..................>>>>........<<<<.<<<<<<<. CCCTCGATGGTGTAGTTGGT.A.TCACAACAGGCTGTAAaagtcttcggataacctccgaaaatcgtaacctgcaggtcaccagtaagctacccattgaacttcctcgtatgctccacaagcatatcact.....AACAGAAC...........G.ACCTAGgTTCGAATCTGGTTCGAGGGA tRNA-Tyr-GTA-3-1 Sc: 27.4 CCCTCGATGGTGTAGTTGGT.A.TCACAACAGGCTGTAAaagtcttcggataacctccgaaaatcgtaacctgcaggtcaccagtatgtaccaacccatcgaatatactcctcatatgcccacaagcatatcactAACAGAAC...........G.ACCTAGgTTCGAATCTGGTTCGAGGGA tRNA-Tyr-GTA-4-1 Sc: 26.9
Val tRNAs
>>>>>>>..>>>............<<<.>>>>>...........................................<<<<<................>>>>>..........<<<<<...<<<<<<<. GGTTTCATGGTGTAGTTGGTtA.TCACGCGACCTTAACA....................................CGGTCGAG...........GtCTTGAGT.TCGATC..CTCAA...TGAAATCA tRNA-Val-AAC-1-2 Sc: 69.2 GGTTTCATGGTGTAGTTGGTtA.TCACGCGACCTTAACA....................................CGGTCGAG...........GtCTTGAGT.TCGATC..CTCAA...TGAAATCA tRNA-Val-AAC-1-3 Sc: 69.2 GGTTTCATGGTGTAGTTGGTtA.TCACGCGACCTTAACA....................................CGGTCGAG...........GtCTTGAGT.TCGATC..CTCAA...TGAAATCA tRNA-Val-AAC-1-5 Sc: 69.2 GGTTTCATGGTGTAGTTGGTtA.TCACGCGACCTTAACAtacgttcttcggaacattgta...............CGGTCGAG...........GtCTTGAGT.TCGATC..CTCAA...TGAAATCA tRNA-Val-AAC-1-1 Sc: 61.4 GGTTTCATGGTGTAGTTGGTtA.TCACGCGACCTTAACAaacatctgtcgagatattgta...............CGGTCGAG...........GtCTTGAGT.TCGATC..CTCAA...TGAAATCA tRNA-Val-AAC-1-4 Sc: 61.4 >.>>>....>>>>..........<<<<..>>>>...........................................<<<<.................>.>>............<<.<.....<<<.<. GCTTA....GCTCAGTTGGTtA.GAGCACGGTGCTAACA....................................ACGCCAAG...........GtTGCGAGTa..AAAT..ATTAT...GATAAACA tRNA-Val-AAC-2-1 Sc: 20.2 >>>>>>>..>>>............<<<.>>>>>...........................................<<<<<................>>>>>..........<<<<<...<<<<<<<. GGCCGAATAGTGTAGTTGGTtA.TCACGTTCGCTTCACA....................................CGCGAGAG...........GtCGAGGGA.TCGAGC..CCCTC...TTCGGTCA tRNA-Val-CAC-1-1 Sc: 73.0 GTCCGCGTAGAGTAGT.GGTcA.TCTCGCCAGAATCACAggttgggtctgaatatcaggatcaaacgacgg....CTCTGGAT...........AtCGTCGGT.TCGAAC..CCGAC...CGCGGGCA tRNA-Val-CAC-2-1 Sc: 52.2 >>>>..>..>>>>..........<<<<.>...>...........................................<...<................>>>>>..........<<<<<...<..<<<<. GAGCTCGTGGTGTAATTGGT.A.ACACAC.AGCTTCACAtatcgaaggtcgtggcaacactccttcatagttggaAG...GA............GtTCTTGGT.TCGAAT..CCAAG...CCTGCTCA tRNA-Val-CAC-3-1 Sc: 20.8 >>>>>>>..>>>>..........<<<<.>>>>>...........................................<<<<<................>>>>>..........<<<<<...<<<<<<<. AAGGGATTAGCTCAGTTGGT.A.GAGCATTTGTTTTACA....................................CACAAATT...........GtCAAAAGT.TCGATT..CTTTT...ATTCCTTA tRNA-Val-TAC-2-1 Sc: 60.3 >>>>>>>..>>>............<<<.>>>>>...........................................<<<<<................>>>>>..........<<<<<...<<<<<<<. GGGTGTGTAGTCTAGT.GGTtA.TGATTTTTCCTTTACAccgtttgagtgaaaat....................CGGAAAGG...........GtCCTCAGT.TCGATC..CTGAG...CACGCTCA tRNA-Val-TAC-1-1 Sc: 56.2