tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 52
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 2
tRNAs with undetermined or unknown isotypes 7
Predicted pseudogenes 12
Total tRNAs 73
Intron Summary (tRNAs with introns: 42)
Ala AGC
1
Ala CGC
1
Ala TGC
1
Gly GCC
1
Gly CCC
1
Gly TCC
1
Pro GGG
1
Thr CGT
1
Thr TGT
1
Val TAC
1
Ser AGA
2
Ser TGA
2
Ser GCT
1
Arg TCG
1
Arg CCT
1
Arg TCT
2
Leu CAG
1
Leu CAA
1
Leu TAA
2
Lys CTT
1
Asp ATC
1
Asp GTC
2
Glu TTC
2
His GTG
2
Gln CTG
1
Gln TTG
1
Ile AAT
2
Ile TAT
3
Tyr ATA
1
Tyr GTA
1
Supres TCA
1
Supres TTA
1

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 55484

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
1
GGC
 
CGC
1
TGC
1
3
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
1
CCC
1
TCC
1
3
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
 
GGG
1
CGG
 
TGG
 
1
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
 
GGT
 
CGT
1
TGT
1
2
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
2
GAC
 
CAC
1
TAC
3
6
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
3
GGA
 
CGA
1
TGA
3
ACT
 
GCT
1
 
 
 
 
8
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
1
GCG
 
CCG
 
TCG
1
 
 
 
 
CCT
1
TCT
3
6
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
 
GAG
 
CAG
1
TAG
 
 
 
 
 
CAA
1
TAA
3
5
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
1
 
 
 
 
1
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
1
 
 
 
 
1
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
1
TTT
2
3
 
 
 
 
AAG
0
AAA
0
0%
AspATC
1
GTC
2
 
 
 
 
3
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
 
TTC
3
3
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
2
 
 
 
 
2
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
1
TTG
1
2
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
2
GAT
1
 
 
TAT
3
6
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
-/4
 
 
0
 
 
 
 
ATG
0
 
 
0%
TyrATA
1
GTA
1
 
 
 
 
2
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
1
CTA
 
TTA
1
2
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
1
 
 
 
 
1
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
 
 
 
0
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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