Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>............<<.<.>>>>>...................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGGATGGTTTAGT.GGT.A.TAA.TACTCCCTTAGCAagccttcatttggagactaagca.....................................TGGGAGTG...........GtCCGGGGTTCGATTCCCCGTCTGTCCA tRNA-Ala-AGC-4-1 Sc: 64.6 GGGCGAATGGTTTAGT.GGT.A.TAA.TACTCCCTTAGCAtagcctgcacatc...............................................TGGGAGTG...........GtCCAGGGTTCGATTCCCTGTTCGTCCA tRNA-Ala-AGC-1-1 Sc: 64.0 GGGCGAATGGTTTAGT.GGT.A.TAA.TACTCCCTTAGCAtgactttcgcatc...............................................TGGGAGTG...........GtCCAGGGTTCGATTCCCTGTTCGTCCA tRNA-Ala-AGC-1-2 Sc: 64.0 GGGCGAATGGTTTAGT.GGT.A.TAA.TACTCCCTTAGCAagattctccatctgagtcctaaca....................................TGGGAGTG...........GtCCGGGGTTCGATTCCCCGTTTGTCCA tRNA-Ala-AGC-2-1 Sc: 63.2 GGGCGAATGGTTTAGT.GGT.A.TAA.TACTCCCTTAGCAtggtttaaactaactaagttgtt.....................................TGGGAGTG...........GtCCAGGGTTCGATTCCCTGTTTGTCCA tRNA-Ala-AGC-3-1 Sc: 62.4 >>>>.>>..>>>>..........<<<.<..>>>.....................................................................<<<.................>>>>>.......<<<<<<<.<<<<. GCCCCCGTAGCACAGT.GGT.A.GTGgTAAGTCCTTGGCCgactcacgacctttgcgtctctggtcctagcttctaacatagtacagcgtgtcactcgtaATGACAAG...........GtCGTCTGTTCGATCCAGGCCGTGGGCA tRNA-Ala-GGC-1-1 Sc: 25.0 >>>>>>>..>>>............<<.<.>>>>>...................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCTTGTGGTCTAGG.GGT.A.TGA.TCTTCGTTTCGCAcctgtgaaagcttggatagtctttggactttcctaaactatcagtaatagttgca.....TATGAATG...........GtCCCGGGTTCAATTCCCGGCGAGTCCA tRNA-Ala-CGC-1-1 Sc: 51.1 >>>>>>>..>>>............<<.<.>>>>>...................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGGAATAGTGTAGG.GGTtA.TCG.CGTCCGCTTTGCAtcttcgtgtc..................................................TGCGGAAG...........GtCCGGGGTTCAATTCCCCGTTCCTCCA tRNA-Ala-TGC-1-1 Sc: 61.9 GGGGGAATAGTGTAGG.GGTtA.TCG.CGTCCGCTTTGCAtatcacggcatacttca...........................................TGCGGAAG...........GtCCGGGGTTCAATTCCCCGTTTCTCCA tRNA-Ala-TGC-2-1 Sc: 60.4 >>>>>>>..>>>>..........<<<.<.>>>>>...................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGATATAGTTTAATTGGT.A.AAA.CTGCGATTTTGCA............................................................TATCGTTA...........A.TTCGGGATCGACTCCTGATATCTCCA tRNA-Ala-TGC-3-1 Sc: 36.4
Arg tRNAs
>>>>>.>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGCCGTGTGGCTCAATGGC.A.GAGCGTCTGACTACGAgtggcttcaacttgccatgtgtt........ATCAGAAG...........GtCGCAGGTTCGACCCCTGTCTCGGTCA tRNA-Arg-ACG-1-1 Sc: 69.7 GGCCGTGTGGCTCAATGGC.A.GAGCGTCTGACTACGActaatgtccttgtgacattcagacaatgta.ATCAGAAG...........GtCGCAGGTTCGACCCCTGTCTCGGTCA tRNA-Arg-ACG-1-2 Sc: 69.4 GGCCTTGTGGCTCAATGGC.A.GAGCGTCTGACTACGActgatctcctgagagggaattcattagcgtcATCAGAAG...........GtCGCAGGTTCGACCCCTGTCTAGGTCA tRNA-Arg-ACG-2-1 Sc: 69.4 >>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GACCTTGTGGCGCAATGGTtA.GCGTATCTCTTTCCGG...............................AGGAGAAG...........GtTCCAGGTTCGAGTCCTGGTGAGGTCG tRNA-Arg-CCG-1-1 Sc: 64.4 >>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCGCGTGGCCTAATGGCtA.AGGCGCTAGATTTCGGtcctctaatccgagtt...............CTCTAGAG...........AtTCCAGGTTCGACTCCTGGCGTGGTCG tRNA-Arg-TCG-1-2 Sc: 59.1 GGCCGCGTGGCCTAATGGCtA.AGGCGCTAGATTTCGGtggtgatgaaagctgatct............CTCTAGAG...........AtTCCAGGTTCGACTCCTGGCGTGGTCG tRNA-Arg-TCG-1-1 Sc: 59.0 >>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTGTGCTGGCGCAATGGT.A.GCGCGTAGTCCTCCTA...............................AGACTAAG...........GtTCAGGGTTCGAGTCCCTGGTACATCG tRNA-Arg-CCT-1-1 Sc: 69.1 >>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCCGTGGCCTAATGGCtA.AGGCGTGAGACTTCTActgcaagtttccctccaggggttcta.....ATCTCAAG...........AtTGCGGGTTCGAGTCCCGCCGGGGGTT tRNA-Arg-TCT-1-1 Sc: 67.2
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<..<<<<<<<. TCCTCCGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTA..............................................................ATCAGGAG...........GtTGAAAGTTCGAGCCTTTC..CGGGGGAG tRNA-Asn-GTT-1-1 Sc: 72.6 TCCTCTGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTA..............................................................ATCAGGAG...........GtTGAAAGTTCGAGCCTTTC..CGGAGGAG tRNA-Asn-GTT-2-1 Sc: 70.7 GCCTCTATAGCTCAAC.GGT.A.GAGCATGATACTGTTA..............................................................ATATCATG...........A.TAGACGTTCGATTCGTCT..TAGGGGCT tRNA-Asn-GTT-4-1 Sc: 60.1 TCCTCCGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTAatcaggaggtaattaccaaccacgctggttctaggttcctagaattagtgtactaacaaataTTCAGGT..............TGAAAGTTCGAGCCTTTC..CGGGGGAG tRNA-Asn-GTT-3-1 Sc: 49.5
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.............................................................<<<<<...................>>>>>.......<<<<<<<<<<<<. TCTTCCGTAGTATAGTGGTcA.GTATGCAAGCTTGTCA......................................................CGCTTGAG..............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-1 Sc: 69.5 TCTTCCGTAGTATAGTGGTcA.GTATGCAAGCTTGTCA......................................................CGCTTGAG..............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-2 Sc: 69.5 TCTTCCGTAGTATAGTGGTcA.GTATGCAAGCTTGTCA......................................................CGCTTGAG..............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-3 Sc: 69.5 TCTTCCGTAGTATAGTGGTcA.GTATGCAAGCTTGTCA......................................................CGCTTGAG..............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-4 Sc: 69.5 TCTTCCGTAGTATAGTGGTcA.GTATGCAAGCTTGTCA......................................................CGCTTGAG..............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-5 Sc: 69.5 >>>>>>>..>>>>.........<<<<.>..>>.............................................................<<..<...................>>>>>.......<<<<<<<<<<<<. TCTTTGGTAGTATAGTGGTcA.GTATGCGAGCTTGTCAttccaaacgattcgctctggccaggtctatgggaaccccggccgaggtgaatcgAGCGGGTGAATC..........GcCCGGGGTTCAATTCCCTGCCGGAGAG tRNA-Asp-GTC-2-1 Sc: 32.3
Cys tRNAs
>>>>>>>..>>>>................<<<<.>>>>>..........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTTCACGTGACGCAGTGGT.A........GCGTGAAAGATTGCAA...................................ATCTTTAA...........GtCCTTGGTTCGAATCCGAGCGTGAACT tRNA-Cys-GCA-1-1 Sc: 71.6 GTTCACGTGACGCAGTGGT.A........GCGTGAAAGATTGCAA...................................ATCTTTAA...........GtCCTTGGTTCGAACCCGAGCGTGAACT tRNA-Cys-GCA-2-1 Sc: 71.3 GTCCGGGTGACGCAGCAGTtAgcgtgta.GCGTGTAGGATTGCAAttggcgttgctccctggataactcaggcgacaaaaATCCTGAA...........GtCCCCGGTTCAAATCCGGGTCCGGACC tRNA-Cys-GCA-3-1 Sc: 42.1
Gln tRNAs
>>>>>>>..>>>...........<<<.>>>>>....................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTCCATGGTCTAACGGTtA.TGACTGCGGATTCTGA.............TTCCGCCA...........GCGAGGGTTCGACTCCCTCTGGAACCT tRNA-Gln-CTG-1-1 Sc: 58.7 >>>>>>>..>>>...........<<<.>>>>>....................<<<<<...............>.>>>.......<<<.<<<<<<<<. GGTTCCATGGTCTAACGGTtA.TGACTGCGGATTCTGA.............TTCCGCCA...........GCGAGGGTTCGACTCCCCCTGGAACCT tRNA-Gln-CTG-2-1 Sc: 53.0 >>>>>>>..>>>>.........<<<<.>>>>>....................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGCTCGTTCGTCTAGGGGTcA.GGACGCTGGATTTTGAtcaagaaa.....TTCCAGAA...........GCACCAGTTCGAATCTGGTACGAGCCT tRNA-Gln-TTG-1-1 Sc: 53.6 GACTCGTTAGTCTAGGGGTcA.GGACGCTGGATTTTGAcgactcgttgcacTTCCGGAA...........ACATCAGTTCGAATCTGGTACGAGTCT tRNA-Gln-TTG-2-1 Sc: 49.9
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCGGTATGGTGTAGTGGTtA.ACATCGCTCGCTCTCA.................CCGAGCAG...........C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-1 Sc: 61.0 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCA.................CCGAGCAG...........C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-2-1 Sc: 56.5 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCA.................CCGAGCAG...........C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-2-2 Sc: 56.5 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCA.................CCGAGCAG...........C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-2-3 Sc: 56.5 >>>>>>>..>>>...........<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCGGTGTGGTGTAATGGCtA.TCATACTGCGCTTTCAtggttacttggaagtg.CCGCAGGG...........A.CCGGGGTTCGATTCCCCGCATCGGAG tRNA-Glu-TTC-1-2 Sc: 55.6 TCCGGTGTGGTGTAATGGCtA.TCATACTGCGCTTTCAagtcagatctgaagaatCCGCAGGG...........A.CCGGGGTTCGATTCCCCGCATCGGAG tRNA-Glu-TTC-1-1 Sc: 55.5 >>>>>>>..>>>...........<<<.>>>>..........................<<<<................>>>>>.......<<<<<<<<<<<<. GGATTAGTAGTCAAGTGGTtA.CGACATAGCTCTTTCA.................ATGCTACC...........AtCGCAGGTTCGATCCCTGTCTAGTCTA tRNA-Glu-TTC-2-1 Sc: 50.9 >>>>>>>..>>>>.........<<<<.>>>>..........................<<<<................>.>>>.......<<<.<<<<<<<<. GGATTAGTAGTTAAGTGGTtA.TAACATAGCTCTTTCA.................ATGCTACC...........AtCGCAGGTTTAATCCCTATCTAGTCTA tRNA-Glu-TTC-3-1 Sc: 36.2
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTGATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtccgggcagcgTCGGGGAG...........CCCTGGGTTCGATTCCCAGATCACGCA tRNA-Gly-GCC-2-1 Sc: 58.9 GCGTAATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtccgggcaacgTCGGGGAG...........CCCTGGGTTCGATTCCCAGATTACGCA tRNA-Gly-GCC-1-1 Sc: 58.1 GCGTAATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtccgagcaacgTCGGGGAG...........CCCTGGGTTCGATTCCCAGATTACGCA tRNA-Gly-GCC-3-1 Sc: 58.1 GCGTAATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtccgggcagcgTCGGGGAG...........CCCTGGGTTCGATTCCCAGATTACGCA tRNA-Gly-GCC-3-2 Sc: 58.1 GCGTAATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtccgagcaacgTCGGGGAG...........CCCTGGGTTCGATTCCCAGATTACGCA tRNA-Gly-GCC-3-3 Sc: 58.1 >>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTGAATAGTGTAGCGGTtA.GCATGCATGCTTCCCA...........AGCATGCG...........ACCCGGGTTCGAGTCCCGGTTCACGCA tRNA-Gly-CCC-1-1 Sc: 71.3 >>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGGCCATGGTGTAACGGTtA.GCATGGCTGATTTCCA...........TTCAGCCG...........ACTCGGGTTCGACTCCCGATGGCCGCA tRNA-Gly-TCC-1-1 Sc: 59.6 GCGGCCATGGTGTAACGGTtA.GCATGGCTGATTTCCA...........TTCAGCCG...........ACTCGGGTTCGACTCCCGATGGCCGCA tRNA-Gly-TCC-1-2 Sc: 59.6 >>>>>>>..>>>>.........<<<<..>>>>..................<<<<................>>>>>.......<<<<<<<<<<<<. ACGGGTATAGGTTAATGGT.A.GACTTTCTGATTTCCA...........CTCAGCGT...........GCGTCAGTTCAAATCTGACTACCCGTA tRNA-Gly-TCC-2-1 Sc: 44.3
His tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCACAGTCGTCTAGG.GGTaA.GGACACCAGTTTGTGGagacacctgcgaag...CACTGGAA...........A.CCGAGGTTCGAGTCCTCGCTGTGGCA tRNA-His-GTG-1-1 Sc: 52.1 GCTGCAGTCGTCTAGG.GGTaA.GGACACCAGTTTGTGGtcaactcaggttaggatCACTGGAA...........A.CCGAGGTTCGAGTCCTCGCTGTGGCA tRNA-His-GTG-2-1 Sc: 46.4 >>>>.>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<.<<<<. GTGGTTATAGTTCAACAGGT.A.GAGCAACTGTATGTGG.................CACAGTAA...........GtTCTTGGTTCGAGTCCAAGTATCCACC tRNA-His-GTG-3-1 Sc: 37.6
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCCGTAGCTCAGTTGGTtA.GAGCTTCGTACTAATAaacattagtg.......................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-1 Sc: 77.7 GCTTCCGTAGCTCAGTTGGTtA.GAGCTTCGTACTAATAaacattggtg.......................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-2 Sc: 77.7 GCTTCCGTAGCTCAGTTGGTtA.GAGCTTCGTACTAATAaacgttagtg.......................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-3 Sc: 77.7 GCTTCCGTAGCTTAGTTGGTtA.GAGCTTCGTACTAATAaacgttagta.......................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-2-1 Sc: 75.1 >>>>>>>..>>>>..........<<<<.>>>>..........................................<<<<................>>>>>.......<<<<<<<<<<<<. GTTCCCGTAGCGGAGT.GGTtA.CCGCGTGACTCTTATAcgctaagggcttttctttggtgctatgttagaaATGTCAAG...........GtCCGGGGTTCGACCCCCCGCGGGAACA tRNA-Ile-TAT-1-1 Sc: 63.3
Leu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>...........................................<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<. GGTGAGATGGCCGAGTTGGTt.A.TGGCGTAAGATTAAGGtacatgcctgtt........................TTCTTAT.GGAGC.........AATCCG.CCTGGGTTCGAGTCCCAG.TCTCATCA tRNA-Leu-AAG-1-1 Sc: 65.0 GGTGAGATGGCCGAGTTGGTt.A.TGGCGTAAGATTAAGGtgtatccctcat........................TTCTTAT.GGAGC.........AATCCG.CCTGGGTTCGAGTCCCAG.TCTCATCA tRNA-Leu-AAG-1-3 Sc: 65.0 GGTGAGATGGCCGAGTTGGTt.A.TGGCGTAAGATTAAGGtgtgcattagtcttat....................TTCTTAT.GGAGC.........AATCCG.CCTGGGTTCGAGTCCCAG.TCTCATCA tRNA-Leu-AAG-1-2 Sc: 64.9 >>>>>>>..>>>.............<<<.>>>>>...........................................<<<<<..>>>.>.........<.<<<...>>>>>.......<<<<<.<<<<<<<. GGCACTTTGGCCGAGT.GGTctA.AGGCGCCGTGTTCAGGtccccagccggaatagtccggttgttctgat.....TCGCGGT.CTAGT.........AATAGG.CGAGGGTTCGAATCCCTC.AGGTGTCA tRNA-Leu-CAG-1-1 Sc: 58.6 GGCACTTTGGCCGAGT.GGTctA.AGGCGCCGTGTTCAGGtccctccgtttcggttcgtccgaacggttcctct..TCGCGGT.CTAGT.........AATAGG.CGAGGGTTCGAATCCCTC.AGGTGTCA tRNA-Leu-CAG-1-2 Sc: 58.5 >>>>>>>..>>>.............<<<.>>>>>...........................................<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<. AGCTGGGTCCTGTAGC.GGTt.A.TCAGGTTGTATTCAGA....................................GTGCAATGACTT...........CGGTCtCGCGGGTTCGAATCCCGT.CTCAGCTG tRNA-Leu-CAG-2-1 Sc: 41.8 >>>>>>>..>>>.............<<<.>>>>>...........................................<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<. GCGAGTCTGGCCGAGT.GGTt.A.AGGCGTTGTGTTTAGGtcagcctgaatgcctcaggagaacgcttaaa.....CCGCAAT.GGGC.TTT.......GCCCG.CGTAGGTTCGATCCCTAC.GGCTCGCA tRNA-Leu-TAG-1-1 Sc: 70.9 >>>>>>>..>>>>...........<<<<.>>>>.............................................<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<. GGCAGAATGGCCGAGT.GGTctA.TGGCGACGGTCTCAAGcacatggaatatggtgtttcgctccgcaagggagtgTTCCGTT.CACGA.........AAGTGG.CCGGGGTTCGAATCCCCG.TTCTGTCA tRNA-Leu-CAA-1-1 Sc: 53.0 GGCAGAATGGCCGAGT.GGTctA.TGGCGACGGTCTCAAGtacatggatatgttcttacgcatcctcaacggagcgTTCCGTT.CACGA.........AAGTGG.CCGGGGTTCGAATCCCCG.TTCTGTCA tRNA-Leu-CAA-1-2 Sc: 53.0 >>>>>>>..>>>.............<<<.>>>>>...........................................<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<. ACCAAGATGGCCGAGT.GGTctA.AGGCGGTGCATTTAAGctatgctcagcgcttaac..................CTGCACT.ATCGA.........GAGATG.CCTGGGTTCGAACCCCAG.TCTTGGTA tRNA-Leu-TAA-1-1 Sc: 54.7 GTCCGAATGGTGAAATTGGCa.A.ACACAACAAACTTAAG....................................CTTTGTAGACT..TCT........AGTCtTGAAGGTTCAAGTCCTTC.TTCGGATA tRNA-Leu-TAA-2-1 Sc: 45.5
Lys tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...................<<<<.<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAagagtacacgaaATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-2-1 Sc: 78.2 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAcgagtgcacgaaATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-2-2 Sc: 78.2 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAcgagtacacgaaATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-2-3 Sc: 78.2 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAcgagtaattggcATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATTGGGCT tRNA-Lys-CTT-1-1 Sc: 77.0 GCCTGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAcaagcatacgaaATCTC.AAG...........GtTGCGGGTTCGACCCCCGCGCTGGGCT tRNA-Lys-CTT-3-1 Sc: 70.0 >>>>>>>..>>>>..........<<<<.>>>>>...................<<<<.<................>>>>>.......<<<<<<<<<<<<. GCCCGGGTAGCTCAAT.GGCtA.GAGCGTGGGACTTTTA............ATCCC.AAG...........GtTGGGGGTTCGAGACCCCCCTCGGGCG tRNA-Lys-TTT-1-1 Sc: 80.7 GGAACTTTAGTATAAT.GGTgA.ATGCGTATGACTTTTA............ATCATtAAA...........A.TGTAGGTTCGATTCCTACAAGTTCTA tRNA-Lys-TTT-2-1 Sc: 50.4 >>>>>>>..>>>>..........<<<<.>>>>.....................<<<.<................>>>>>.......<<<<<<<<<<<<. GGATTAGTAGTTAAGT.GGTtA.TAATATAGCTCTTTTA............ATGCT.ACT...........AtTATAGGTTTAATCCCTATCTAGTCTA tRNA-Lys-TTT-3-1 Sc: 39.5
Met tRNAs
>>>>>>>..>>>>..........<<<<........>>>>..................................................................<<<<................>>>>>.......<<<<<<<<<<<<. GTCTCCGTGGCTTAGTTGGTtA.AAGCG.......TCGGTCTCATAaacatatgatccagttcgacattggagta............................ATCCGAAG...........GtCGTGAGTTCGACTCTCACCGGGGACA tRNA-Met-CAT-1-1 Sc: 73.8 >>>>>>>..>>>>..........<<<<........>>>>>................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGCAATTTGGCGCAGT.GGA.A.GCGCG.......CCGGGCTCATA.........................................................ACCCGGAG...........GtCACACGATCGAAACGTGTAATTGCTA tRNA-iMet-CAT-1-1 Sc: 62.6 AGGGTTATAGCTTAATCGGT.A.AAGCA.......TGCTGCTCATA.........................................................ACAGTAAA...........AaTAAGTGTTCAAGTCACTTTAGCCCTA tRNA-Met-CAT-2-1 Sc: 38.2 >>>>>>>..>>>>..........<<<<........>>.>..................................................................<.<<................>>>>>.......<<<<<<<<<<<<. AGCAATTTGGCGCAGT.GGA.A.GCGCGgttagtaCCAGCCCGATAattgatctcaaacatccaaaccccatcaaaactaacaatgtaatagccgggctcataACCCGGAG...........GtCGCACGATCGAAACGTGCAATTGCTA tRNA-iMet-CAT-2-1 Sc: 25.1
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGGCCATAGATTAGCTGGGAGATCGTCAGACTGAAGtcaacttcaatcctacggatgcct.ATCTGAAG...........GtCGTGTGTTCGAGTCACACTGGCCGCA tRNA-Phe-GAA-1-1 Sc: 63.4 GCGGCCATAGATTAGCTGGGAGATCGTCAGACTGAAGttaaacttcaatcctacggatgcctATCTGAAG...........GtCGTGTGTTCGAGTCACACTGGCCGCA tRNA-Phe-GAA-1-2 Sc: 63.4 GCGGCCATAGATTAGCTGGGAGATCGTCAGACTGAAGtcaaacttcaatcctacggatgcctATCTGAAG...........GtCGTGTGTTCGAGTCACACTGGCCGCA tRNA-Phe-GAA-1-3 Sc: 63.4 GCGGCCATAGATTAGCTGGGAGATCGTCAGACTGAAGtcaacttcaatcctacggatgcct.ATCTGAAG...........GtCGTGTGTTCGAGTCACACTGGCCGCA tRNA-Phe-GAA-1-4 Sc: 63.4 >>>>>.>..>>>>........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<.<<<<<. GCTCGTGTAACTCAATTGGTAGAGTGAAATATTGAAG.........................CTATTTTT...........GtTGTAAGTTCAAGTCTTACCTCGAGCA tRNA-Phe-GAA-2-1 Sc: 54.2
Pro tRNAs
>>>>>>>..>>>..........<<<.>>>>>....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTTCGTGGTTTAGTGGTA.TAATTCTCGCTTAGGGtgacaccctacgctcaatc..........................................TGCGAGAG...........GtCCCGGGTTCGATCCCCGGCGAAGCCC tRNA-Pro-AGG-1-1 Sc: 69.4 GGCTTCGTGGTTTAGTGGTA.TAATTCTCGCTTAGGGtaacacccgaagcaccgct..........................................TGCGAGAG...........GtCCCGGGTTCGATCCCCGGCGAAGCCC tRNA-Pro-AGG-1-2 Sc: 69.4 GGCTTCGTGGTTTAGTGGTA.TAATTCTCGCTTAGGGtaacacccgaagcaccgct..........................................TGCGAGAG...........GtCCCGGGTTCGATCCCCGGCGAAGCCC tRNA-Pro-AGG-1-3 Sc: 69.4 >>>>>>>..>>>>........<<<<.>>>>>....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTTCGTGGTATAGTGGTA.ATATACTCGCTTCGGGgaaagcccccttaatccatagggttat..................................TGTGAGTG...........GtCCCGGGTTCGATCCCCGGCGAAGCCC tRNA-Pro-CGG-1-1 Sc: 58.5 >>>>>>>..>>>..........<<<.>>>>>....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCAAATGGTCTAGTGGTA.TGATTCTTGCTTTGGGaaggtagatccacctcagc..........................................TGCAAGAG...........GtCCCGTGTTCAATCCACGGTTTGGCCC tRNA-Pro-TGG-1-1 Sc: 61.4 GGCCAAATGGTCTAGTGGTA.TGATTCTTGCTTTGGGgaaggattgactccatctcggc.......................................TGCAAGAG...........GtCCCGTGTTCAATCCACGGTTTGGCCC tRNA-Pro-TGG-1-2 Sc: 61.3 >>>>.>>..>>>>........<<<<.>>>>>....................................................................<<<<<................>>>>>.......<<<<<<<.<<<<. GCCCGGTTAGCTTAGTGGTA.GAGCGTTGCACTTGGTacgtcgcatgtcgattccacaaaccccgacccactgctaacccaacctagtaattcaagccATGCAAAG...........GtCATTCGTTCGACTCGGATACGGGGCA tRNA-Pro-TGG-2-1 Sc: 55.3
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>...........................<<<<<..>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GGCGGAGTGTCCGAGTGGTt.A.AGGAGAATCATTAGAA....................ATGATTT.GCGT.TC.......GCGCGCGCAAGTTCGAATCTTGT.CTCCGTCG tRNA-Ser-AGA-1-1 Sc: 62.1 GGCGGAGTGTCCGAGTGGTt.A.AGGAGAATCATTAGAA....................ATGATTT.GCGT.TC.......GCGCGCGCAAGTTCGAATCTTGT.CTCCGTCG tRNA-Ser-AGA-1-2 Sc: 62.1 GGCGGAGTGTCCGAGTGGTt.A.AGGAGAATCATTAGAA....................ATGATTT.GCGT.TC.......GCGCGCGCAAGTTCGAATCTTGT.CTCCGTCG tRNA-Ser-AGA-1-3 Sc: 62.1 >>>>>>>..>>>............<<<.>>>>>...........................<<<<<..>>>>>........<<<<<..>>>>>.......<<<<<.<<<<<<<. GGCGCTGTGGCGGAGTGGTccA.ACGCGAAAGATTCGAAttcccctgggac........ATCTTTT.CCCTT........AGGGGGCACCGGTTCGAATCCGGT.CGGCGTCG tRNA-Ser-CGA-2-1 Sc: 67.4 >>>>>>>..>>>............<<<.>>>>>...........................<<<<<..>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GGCAAAGTGCCAGAGTGGTt.A.ATGGGTGGCACTCGAAagtacaatcaacgtgcagtaATGCCAT.GTCT.TC.......GGACGCGCAGGTTCAAATCCTGT.CTTTGTCG tRNA-Ser-CGA-1-1 Sc: 58.4 >>>>>>>..>>>............<<<.>>>>>...........................<<<<<..>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GGCAGAGTGCCCGAGTGGTccA.AGGGGATTGACTTGAAtgaggcctctcatcagct..ATCAATT.ACGT.TC.......GCGTGCGCAGGTTCGAACCCTGT.CTCTGTCG tRNA-Ser-TGA-1-1 Sc: 60.7 >>>>>>>..>>>............<<<.>>.................................<<......................>>>>>.......<<<<<.<<<<<<<. AGAGAATTGGCCGAGTGGTttA.AGGCGGTAAGTTTGAGttttactaggtt........AGAAATAG.....CT...........ACATCCGTTCGAATCGGAT.ATTCTCTG tRNA-Ser-TGA-2-1 Sc: 32.5 >>>>>>>..>>>............<<<.>>>>>...........................<<<<<..>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GACACTTTGGCCGAGTGGTt.A.AGGCGATGCCCTGCTAtttgacaaccagttgtg...AGGCATT.ACAT.TC.......GTGTGCGCAGGTTCGAATCCTGC.AGGTGTCG tRNA-Ser-GCT-1-1 Sc: 62.2 GACACTTTGGCCGAGTGGTt.A.AGGCGATGCCCTGCTAtctgatatgcggtgaaa...AGGCATT.ACAT.TC.......GTGTGCGTAGGTTCGAATCCTGC.AGGTGTCG tRNA-Ser-GCT-2-1 Sc: 58.9
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>............<<<.>>>>>.................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCGTTGGCTCAGT.GGT.A.AAGCGTGTCACTAGTA..........................................................................................ATGACAAG...........AtCACTGGTTCGATTCCAGTACGGGGCA tRNA-Thr-AGT-1-1 Sc: 81.9 GCCCCGTTGGCTCAGT.GGT.A.AAGCGTGTCACTAGTA..........................................................................................ATGACAAG...........AtCACTGGTTCGATTCCAGTACGGGGCA tRNA-Thr-AGT-1-2 Sc: 81.9 GCCCCGTTGGCTCAGT.GGT.A.AAGCGTGTCACTAGTA..........................................................................................ATGACAAG...........AtCACTGGTTCGATTCCAGTACGGGGCA tRNA-Thr-AGT-1-3 Sc: 81.9 >>>>>>>..>>>>..........<<<<.>>>>...................................................................................................<<<<................>>>>>.......<<<<<<<<<<<<. GTCTTCATGGCTTAGTTGGTtA.AAGCGTCGGTCTCGTTcgtctccctcacacaatcttgccacaacccgtcatgccatattaatctatcagcagatatcaaacatgatccagtggaaacattggagtaATCCGAAG...........GtCGCGAGTTCGACTCTCGCTGAGGACA tRNA-Thr-CGT-1-1 Sc: 64.7
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>..........................<<<<................>>>>>.......<<<<<<<<<<<<. GGGGGGCTGGCGCAACGGTA.GCGCGTCAGATTCCAGttactttacttggaataACCTGAAG...........GtTATCGGTTCAAATCCGGTGTCCCTCA tRNA-Trp-CCA-1-1 Sc: 53.8 GGGGCCTTAGATCAGTGGTA.GATTATGTGATTCCAGaattggagtt.......TCCACAGG...........GtCGTCCGTTCGATCCGGGCAGGCCTCA tRNA-Trp-CCA-2-1 Sc: 43.4 GGGGCCTTAGATCAGTGGTA.GATTATGTGATTCCAGccatggagtt.......TCCACAGG...........GtCGTCCGTTCGATCCGGGCAGGCCTCA tRNA-Trp-CCA-2-2 Sc: 43.4
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. CTCCGGGTAGTCTAGTTGGTttATGGCGTCTGACTGTAAtggaacagctca...ATCAGAAT...........GtCGCGTGTTCGAATCACGCCCTGGAGA tRNA-Tyr-GTA-1-2 Sc: 65.5 CTCCGGGTAGTCTAGTTGGTttATGGCGTCTGACTGTAAtggattcacagctctATCAGAAT...........GtCGCGTGTTCGAATCACGCCCTGGAGA tRNA-Tyr-GTA-1-1 Sc: 65.4
Val tRNAs
>>>>>>>..>>>............<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCCGTGGTCTAGTTGGTcA.TGATTTCTCGTTAACA................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGGAACCA tRNA-Val-AAC-1-1 Sc: 74.7 GGTTCCGTGGTCTAGTTGGTcA.TGATTTCTCGTTAACA................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGGAACCA tRNA-Val-AAC-1-2 Sc: 74.7 GGTTTCGTGGTCTAGTTGGTcA.TGATTTCTCGTTAACA................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGAAACCA tRNA-Val-AAC-2-1 Sc: 74.5 >>>>>>>..>>>>..........<<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTGAGTAGTGTAAC.GGCcA.ACATACGTCCTTCACA................CGGACGAG...........C.TCCGGGTTCGATTCCCGGCTCGACTA tRNA-Val-CAC-1-1 Sc: 53.6 >>>>>>>..>>>>..........<<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. GTCCGTATAGCATAGT.GGT.A.GTGCATCCGCTTTACAtgtggaattatcggttCGCGGAAG...........GtCCTAGGTTCGATCCCTAGTGCGGACA tRNA-Val-TAC-1-1 Sc: 70.1 GAGAAATTAGTTCAATTGGC.A.GAACGTTTGTTTTACA................CACAAAAT...........GtTAAAGGTTCAAATCCTTTATTTCTCA tRNA-Val-TAC-2-1 Sc: 57.4