tRNA Gene Summary

Overview
High confidence set 171
tRNAs decoding standard 20 AA 170
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Unexpected anticodons 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 143
Secondary filter (low feature scores, possible rep. element) 95

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 13)
Arg TCT
1
Leu CAA
2
Ile TAT
2
Tyr GTA
8
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
15
GGC
 
CGC
2
TGC
4
21
GlyACC
 
GCC
9
CCC
4
TCC
4
17
ProAGG
4
GGG
 
CGG
1
TGG
3
8
ThrAGT
5
GGT
 
CGT
 
TGT
3
8
ValAAC
2
GAC
 
CAC
3
TAC
1
6
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
2
GGA
 
CGA
1
TGA
2
ACT
 
GCT
4
 
 
 
 
9
ArgACG
6
GCG
 
CCG
 
TCG
1
 
 
 
 
CCT
2
TCT
3
12
LeuAAG
4
GAG
 
CAG
6
TAG
 
 
 
 
 
CAA
2
TAA
1
13
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
5
 
 
 
 
5
AsnATT
 
GTT
6
 
 
 
 
6
Lys 
 
 
 
CTT
6
TTT
4
10
AspATC
 
GTC
4
 
 
 
 
4
Glu 
 
 
 
CTC
6
TTC
4
10
HisATG
 
GTG
4
 
 
 
 
4
Gln 
 
 
 
CTG
3
TTG
1
4
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
5
GAT
 
CAT
 
TAT
2
7
iMet/Met 
 
 
 
CAT
4/1
 
 
5
TyrATA
 
GTA
8
 
 
 
 
8
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
10
 
 
 
 
10
Trp 
 
 
 
CCA
3
 
 
3
SelCys 
 
 
 
 
 
TCA
1
1