tRNA Gene Summary

Overview
High confidence set 391
tRNAs decoding standard 20 AA 389
Selenocysteine tRNAs (TCA) 2
Notable atypical predictions  
Anticodon/isotype mismatch 3
Unexpected anticodons 2
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 90
Secondary filter (low feature scores, possible rep. element) 82

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 30)
Arg TCT
5
Leu CAA
6
Ile TAT
6
Tyr GTA
13
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
21
GGC
 
CGC
4
TGC
8
33
GlyACC
 
GCC
8
CCC
9
TCC
5
22
ProAGG
7
GGG
 
CGG
4
TGG
6
17
ThrAGT
9
GGT
 
CGT
4
TGT
6
19
ValAAC
7
GAC
 
CAC
10
TAC
6
23
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
10
GGA
 
CGA
4
TGA
4
ACT
 
GCT
8
 
 
 
 
26
ArgACG
7
GCG
 
CCG
5
TCG
6
 
 
 
 
CCT
5
TCT
6
29
LeuAAG
8
GAG
 
CAG
5
TAG
3
 
 
 
 
CAA
6
TAA
6
28
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
8
 
 
 
 
8
AsnATT
 
GTT
22
 
 
 
 
22
Lys 
 
 
 
CTT
15
TTT
11
26
AspATC
 
GTC
11
 
 
 
 
11
Glu 
 
 
 
CTC
6
TTC
9
15
HisATG
 
GTG
8
 
 
 
 
8
Gln 
 
 
 
CTG
13
TTG
5
18
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
12
GAT
2
CAT
 
TAT
6
20
iMet/Met 
 
 
 
CAT
8/8
 
 
16
TyrATA
 
GTA
13
 
 
 
 
13
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
28
 
 
 
 
28
Trp 
 
 
 
CCA
7
 
 
7
SelCys 
 
 
 
 
 
TCA
2
2