Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>............<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGAATTGGTTTAGT..GGTA.TAATGTTCCCTTAGCAatccatccacgatggttgatt..........TGGGAGAG...........GtCGCGAGTTCGATTCTTGCATTCTCCA tRNA-Ala-AGC-1-3 Sc: 55.5 GGGGAATTGGTTTAGT..GGTA.TAATGTTCCCTTAGCAacgtccccttcagggcttgtgtt........TGGGAGAG...........GtCGCGAGTTCGATTCTTGCATTCTCCA tRNA-Ala-AGC-1-1 Sc: 55.4 GGGGAATTGGTTTAGT..GGTA.TAATGTTCCCTTAGCAagtcagacttgtctgattgatt.........TGGGAGAG...........GtCGCGAGTTCGATTCTTGCATTCTCCA tRNA-Ala-AGC-1-2 Sc: 55.4 GGGGAATTGGTCTAGT..GGTA.TGATATTCCCTTAGCAccagccttcaggcagtgata...........TGGGAGGG...........GtCGCGAGTTCAATTCTTGCATTCTCCA tRNA-Ala-AGC-2-1 Sc: 50.3 >>>>>>>..>>>............<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGACATGGTCTAGG..GGTA.TGATATCTCATTCGCAtcaccgtgat.....................TTGAGAGG...........GtCGGGGGTTCAATTCCCCCTGTCTCCA tRNA-Ala-CGC-1-1 Sc: 59.1 GGGGACATGGTCTAGG..GGTA.TGATATCTCATTCGCAtcgacgtgat.....................TTGAGAGG...........GtCGGGGGTTCAATTCCCCCTGTCTCCA tRNA-Ala-CGC-1-2 Sc: 59.1 >>>>>>>..>>>............<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGGCATGGTTTAGT..GGTA.TAATGTTTCGTTTGCAttgatccaataggtcaatacgtc........TCGAAAAG...........GtCGCGAGTTCGATTCTTGCTGCCTCCA tRNA-Ala-TGC-2-1 Sc: 61.3 >>>>>.>..>>>>..........<<<<.>.>>>......................................<<<.<................>>>>>.......<<<<<<.<<<<<. GGGGGTGTAACTCAGT..GGTA.GAGTGCCTGCTTTGCAttgtctgttctgaacagtatccatctatgatTGCATGAA...........GcCCGGGGTTCGATCCCCCGCTCCTCCA tRNA-Ala-TGC-1-1 Sc: 59.1 >>>>>>>..>>>>..........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGCGATGGTTTAATTtGGTA.AAATAACAATCTTGCA...............................CATTGTCT...........A.TCTAGGTTCGAATCCTGGTCGCTCCA tRNA-Ala-TGC-3-1 Sc: 45.3
Arg tRNAs
>>>>>>>..>>>...........<<<.>>>>>...........................................................<<<<<...................>>>.>>.......<<<<<.<<<<<<<. GGCCTGCTGGCCCAATGGC.A.AGGCGCTTGACTACGA....................................................ATCAAGAG..............AtTGCA.GGTTCGATCCCTGC.GTAGGTCA tRNA-Arg-ACG-1-3 Sc: 74.3 GGCCTGCTGGCCCAATGGC.A.AGGCGCTTGACTACGAatgacttcagctctaggttataatgtt.........................ATCAAGAG..............AtTGCA.GGTTCGATCCCTGC.GTAGGTCA tRNA-Arg-ACG-1-2 Sc: 66.4 GGCCTGCTGGCCCAATGGC.A.AGGCGCTTGACTACGAatatctttcagaaatgatgatataagtta.......................ATCAAGAG..............AtTGCA.GGTTCGATCCCTGC.GTAGGTCA tRNA-Arg-ACG-1-1 Sc: 66.3 >>>>>>>..>>>>.........<<<<.>>>>>...........................................................<<<<<...................>>>.>>.......<<<<<.<<<<<<<. GGCCTGATGGCCTAATGGT.A.AGGCGTTGCTTTCCGG....................................................TGGCAAAG..............AtTGTG.GGTTCGAGTCCCAC.TTGGGTCG tRNA-Arg-CCG-1-1 Sc: 64.0 >>>>>>>..>>>>.........<<<<.>>>>>...........................................................<<<<<...................>>>.>>.......<<<<<.<<<<<<<. GGCCGCGTGGCCTAATGGTtA.AGGCGTTGCATTTCGGttcagaatca..........................................CTGCAAAG..............AtTGGG.AGTTCGACTCTTCC.CGCGGTCG tRNA-Arg-TCG-1-1 Sc: 52.8 GGCCGCGTGGCCTAATGGTtA.AGGCGTTGCATTTCGGttcctgagaacta.......................................CTGCAAAG..............AtTGGG.AGTTCGACTCTTCC.CGCGGTCG tRNA-Arg-TCG-1-2 Sc: 52.7 >>>>>>>..>>>>.........<<<<..>..>...........................................................<..<....................>....>.......<...<.<<<<<<<. GCTCCGCTGGCGCAATGGT.A.GCGCGCGAGACTTCTAatctcgaggctgtggggtaagtctcgatgttctattctttgattgcaagtaaCTAACCA...............AcCGAA.AGTTCGAGTCCCAC.GCGGAGTG tRNA-Arg-TCT-2-1 Sc: 46.3 >>>>>>>..>>>>.........<<<<..>..>...........................................................<..<....................>>>..>.......<.<<<.<<<<<<<. GCTCGGCTGGCGCAATGGT.A.GCGCGCGAGACTTCTAatctcgaggctgtggggtaagtttagatatccgtccctgaatttaca.....ATGACTAATAA...........G.TGTGcAGTTCGAGCCCCAC.GTCGAGTG tRNA-Arg-TCT-1-1 Sc: 43.8
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCTCGTGGCGCAATTGGCtAGCGCGTTCGACTGTTA..................ATCGAGAG...........GtTGGTGGTTCAAGCCCACCCGAGGGAG tRNA-Asn-GTT-1-2 Sc: 76.1 TCCCTCGTGGCGCAATTGGCtAGCGCGTTCGACTGTTA..................ATCGAGAG...........GtTGGTGGTTCAAGCCCACCCGAGGGAG tRNA-Asn-GTT-1-3 Sc: 76.1 TCCCTCGTGGCGCAATTGGCtAGCGCGTTCGACTGTTAacagacaattctgaggctATCGAGAG...........GtTGGTGGTTCAAGCCCACCCGAGGGAG tRNA-Asn-GTT-1-1 Sc: 68.4
Asp tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTTGATGGTCTAGTGGTcA.TGATTTCCGCTTGTCAattcttcattgaaaagCGCGGGAG...........ACCGGGGTTCGATTCCCCGTCAGAGAG tRNA-Asp-GTC-1-1 Sc: 62.4 TCTTTGATGGTCTAGTGGTcA.TGATTTCCGCTTGTCAattcacattgcaaag.CGCGGGAG...........ACCGGGGTTCGATTCCCCGTCAGAGAG tRNA-Asp-GTC-1-2 Sc: 62.4 TCTTTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAagcaattgtcaaag..CGCGGGAG...........ATCGGGGTTCGACTCCCCGTCAGAGAG tRNA-Asp-GTC-2-1 Sc: 52.1 TCTTTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAagcaattgtcaaag..CGCGGGAG...........ATCGGGGTTCGACTCCCCGTCAGAGAG tRNA-Asp-GTC-2-2 Sc: 52.1 >..>>.>..>>>...........<<<.>>>>>.......................<<<<<...............>...>.......<...<<.<<..<. TCTTTGATGGTCTAGTGGTtA.TGATTTCCGCTTGTCAagaaactgacagag..CGCGGGAG...........ACCGGGGTTCGATTC...GTGAGTAAA tRNA-Asp-GTC-3-1 Sc: 22.4
Cys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>..................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCTTTAGCTCAGTGGTA.GAGCGGAAGATTGCAGtacaacaatt.ATCTTCAG...........GtCAATCGTTCGAACCGGTTAGGGAGCT tRNA-Cys-GCA-2-1 Sc: 59.7 GGTCCTTTAGCTCAGCGGTA.GAGCAGCCGATTGCAGtaatgcgatttATCGGCAG...........GtCAGTCGTTCGAACCGGCTAGGGACCT tRNA-Cys-GCA-1-1 Sc: 56.9
Gln tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......................<<<<<................>>>.>.......<.<<<.<<<<<<<. GGTTCTATAGTGTAGA.GGTtA.GCACGCAAGATTCTGAtacgcgtcagagatcaTTCTTGA............GtCCCCAGTTCGAGCCCGGG.TAGAACCT tRNA-Gln-CTG-1-1 Sc: 53.6 >>>>>>>..>>>>..........<<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGTCCTATAGTGTAGTCGGTtA.GCACATGGGTTTTTGAaatgaaaaa.......TACCTGGG...........A.CCTGAGTTCGAGTCTCAG.TAGGACCT tRNA-Gln-TTG-1-1 Sc: 54.4 GGTCCTATAGTGTAGTCGGTtA.GCACATGGGTTTTTGAaacaaaaaa.......TACCTGGG...........A.CCTGAGTTCGAGTCTCAG.TAGGACCT tRNA-Gln-TTG-1-2 Sc: 54.4
Glu tRNAs
>>>>>>>..>>>>.........<<<<..>>>>....................................<<<<................>>>>>.......<<<<<<<<<<<<. TCCATACTGGTGTATCGGT.A.ACATTTCCGCCTCTCAtcccagattgtg.................CGCGGTAG...........CGCAGGGTTCGACTCCCTGGTATGGAA tRNA-Glu-CTC-1-1 Sc: 36.4 TCCATACTGGTGTATCGGT.A.ACATTTCCGCCTCTCAtaacagattgtg.................CGCGGTAG...........CGCAGGGTTCGACTCCCTGGTATGGAA tRNA-Glu-CTC-1-2 Sc: 36.4 TCCATACTGGTGTATCGGT.A.ACATTTCCGCCTCTCAacacttgagtggt................CGCGGTAG...........CGCAGGGTTCGACTCCCTGGTATGGAA tRNA-Glu-CTC-1-3 Sc: 36.4 TCCATACTGGTGTATCGGT.A.ACATTTCCGCCTCTCAtcccagagtgtg.................CGCGGTAG...........CGCAGGGTTCGACTCCCTGGTATGGAA tRNA-Glu-CTC-1-4 Sc: 36.4 >>>>>>>..>>>>.........<<<<.>>>>>....................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGAATTGGTGTAGTGGTaA.ACATTTCTGGTTTTCAcaattcacccgaatctgaaact.......TCCAGGAG...........CCACGGGTTCAATTCCCGTATTCGGAA tRNA-Glu-TTC-2-1 Sc: 60.2 TCCGAATTGGTGTAGGGGTcA.ACATTTCTGGTTTTCAcgattcacggtccaccgtcgtctgaaaatTCCAGGAG...........CCACGGGTTCGATTCCCGTATTCGGAA tRNA-Glu-TTC-1-1 Sc: 56.3
Gly tRNAs
>>>>>>>..>>>>............<<<<.>>>>>.....................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCTTGGGTGGTTTAGTGGT....A.AAATCGATGCTTGCCAatgagtccagtcaactggattcatgaa...................TGCATTGG...........CCCCGTGTTCGATTCACGGTCCAAGCA tRNA-Gly-GCC-1-2 Sc: 51.5 GCTTGGGTGGTTTAGTGGT....A.AAATCGATGCTTGCCAatgagtccagtcaactggattcatgat...................TGCATTGG...........CCCCGTGTTCGATTCACGGTCCAAGCA tRNA-Gly-GCC-1-1 Sc: 51.4 GCTTGGGTGGTTTAGTGGT....A.AAATCGATGCTTGCCAatggattcagtcaactgtttccatgat...................TGCATTGG...........CCCCGTGTTCGATTCACGGTCCAAGCA tRNA-Gly-GCC-1-3 Sc: 51.4 GCTTGGGTGGTTTAGTGGT....A.AAATCGATGCTTGCCAatggttccagtcaactggtatccatgaa..................TGCATTGG...........CCCCGTGTTCGATTCACGGTCCAAGCA tRNA-Gly-GCC-1-4 Sc: 51.4 GCTTGGGTGGTTTAGTGGT....A.AAATCGATGCTTGCCAatggatacagttaactgttattcatgat..................TGCATTGG...........CCCCGTGTTCGATTCACGGTCCAAGCA tRNA-Gly-GCC-1-5 Sc: 51.4 >>>>>>>..>>>>............<<<<.>>>>>.....................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCACCAGTGGTTTAATGGT....A.AAATCGAAGCTTCCCAtgtcttaattggcgtggaatcccagattactgggacccagatggcgTGCTTTGG...........CTCCGGGTTCGATTCCCGGCTGGTGCA tRNA-Gly-CCC-1-1 Sc: 53.4 GCGTTAGTATAGTAGTGGTttctA.ACTAGCCGCCCCCCCA..............................................AGGCGGAG...........ACGGGAGTTCGAATCTCCCCTAACGCA tRNA-Gly-CCC-2-1 Sc: 52.9 >>..>>>..>>>>............<<<<.>>>>>.....................................................<<<<<...............>>>>>.......<<<<<<<<..<<. GCTTCTGTGGTCCAATGGTt...A.GGATTCCACCCTTCCA..............................................AGGTGGAG...........GTTCGTGTTCGATTCACGGCAGTTGCA tRNA-Gly-TCC-1-1 Sc: 53.8 GCTTCTGTGGTCCAATGGTt...A.GGATTCCACCCTTCCA..............................................AGGTGGAG...........GTTCGTGTTCGATTCACGGCAGTTGCA tRNA-Gly-TCC-1-2 Sc: 53.8 GCTTCTGTGGTCCAATGGTt...A.GGATTCCACCCTTCCA..............................................AGGTGGAG...........GTTCGTGTTCGATTCACGGCAGTTGCA tRNA-Gly-TCC-1-3 Sc: 53.8
His tRNAs
>>>>>>>..>>>>........<<<<..>>>>.....................................<<<<................>>>>>.......<<<<<<<<<<<<. GGTGGTGTGGTGTAATGGTA.GCACGTGACGTTGTGGttctccgttctcaggattattcatgctgacCCGTTTCA...........ATCTGGGTTCGATTCCCAGCACCGCCA tRNA-His-GTG-1-1 Sc: 42.9
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...............................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCGCTTAGCTCAGTTGGTtAGAGCGTAGTGCTAATA........................ACGCTAAG...........GtCAACAGTTCGACCCTGTTAGTGGGAA tRNA-Ile-AAT-2-1 Sc: 72.9 TCCCGATTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAtaacccttgagtta..........ACGCCAAG...........GtCAGCGGTTCGACCCCGCTATTGGGAA tRNA-Ile-AAT-1-1 Sc: 69.4 TCCCGATTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAaacatcttcattgatgctttatatACGCCAAG...........GtCAGCGGTTCGACCCCGCTATTGGGAA tRNA-Ile-AAT-1-2 Sc: 69.1
Leu tRNAs
>>>>>>>..>>>.............<<<.>>>>>............................................<<<<.<..>>>..........<<<...>>>>>.......<<<<<.<<<<<<<. GGTCAGATGGCCGAGC.GGTt.A.AGGCGCCAGGTTAAGGtttcaatcttaacacaaat..................TCCTG.GT.CACGA......AAGTGG.CGTGGGTTCGATTCCCAC.TCTGATCA tRNA-Leu-AAG-1-1 Sc: 63.7 >>>>>>>..>>>>...........<<<<.>>>>>............................................<<<<.<..>>>..........<<<...>>>>>.......<<<<<.<<<<<<<. GGACAGATGGCCGAGCTGGTt.A.TGGCGCCAGGTTAAGGtatacacttaatcatgttgtaagcaattacaatt...TCCTG.GT.CACGA......AAGTGG.CGTGGGTTCGAGTCCCAC.TCTGTTCA tRNA-Leu-AAG-2-1 Sc: 57.5 GGACAGATGGCCGAGCTGGTt.A.TGGCGCCAGGTTAAGGtatacacttaatcacgttgtaagcaattgcaatt...TCCTG.GT.CACGA......AAGTGG.CGTGGGTTCGAGTCCCAC.TCTGTTCA tRNA-Leu-AAG-2-2 Sc: 57.5 >>>>>>>..>>...............<<.>>>>>............................................<<<<.<.....................>>>>>.......<<<<<.<<<<<<<. GTTACGGTGCCGGAGT.GGTcaA.AAGGGCAAGTCTAAGAca...................................TACTT.GAT................TtTGTCGGTTCGAATCCGAC.TCGTAGCG tRNA-Leu-AAG-3-1 Sc: 38.9 >>>>>>>..>>>.............<<<.>>>>>............................................<<<<.<..>>>..........<<<...>>>>>.......<<<<<.<<<<<<<. GGCAACTTGACCGAGT.GGTt.A.AGGTGCTGTGTTCAGGctggctttcccaagtcacgagtt..............TCGCA.GT.GGAGC......AATCCG.CGAGCGTTCGAATCGCTC.AGTTGTCA tRNA-Leu-CAG-1-1 Sc: 50.9 >>>>>>>..>>>.............<<<.>>>>>............................................<<<<.<..>>............<<...>>>>>.......<<<<<.<<<<<<<. GGGCATCTGGCCGAGT.GGTt.A.AGGCGCTGTGTTTAGGttaggatgcaagtccagctacaacaattt........CCGCA.GT.GGGA........AACCG.CGCAGGTTCGAATCCTGC.GGTGCTCA tRNA-Leu-TAG-1-1 Sc: 58.9 >>>>>>>..>>>.............<<<.>>>>>............................................<<<<.<..>>>..........<<<...>>>>>.......<<<<<.<<<<<<<. GGACAGATGGCCGAGC.GGTt.A.AGGCGGTAGACTCAAGcgtgcttgcacagtttggcagacttagtctgctcgtaTTCTAcTAGAGAA........ATCTG.CGGGGGTTCGAATCCCCC.TCTGTTCA tRNA-Leu-CAA-1-1 Sc: 60.8 >>>>>>>..>>>>...........<<<<.>>>>>............................................<<<<.<..>>>..........<<<...>>>>>.......<<<<<.<<<<<<<. GGAGACGTGGCCGAGT.GGTt.A.TGGCGGTAGACTCAAGcctagcttagcaaactcagtttgttggta........TTCTA.CT.GGAGA......GATCCG.CAGGGGTTCGAATCCCCT.CGTCTTCA tRNA-Leu-CAA-3-1 Sc: 53.6 GGACATGTGGCCGAGT.GGTt.A.TGGCGGTAGACTCAAGctcttgcttggtagatgaaaaacatctgcgcgtatt.TTCTA.CT.GGAGA......GATCCG.CATGGGTTCGAATCCCAT.CGTGTTCA tRNA-Leu-CAA-2-1 Sc: 53.0 >>>>>>>..>>>.............<<<.>>>>>............................................<<<<.<..>>>..........<<<...>>>>>.......<<<<<.<<<<<<<. GCTGATTTGGCCGAGT.GGTctA.AGGCGGCGGTTTTAAGtcatctggatttcgcgagaaatttagcaatctgaa..CACCG.CT.TCGGA......AACGAG.CCAGGGTTCGAACCCCTG.AGTCAGCA tRNA-Leu-TAA-1-1 Sc: 53.4
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGCTAGCTCAATCGGT.AGAGCGTGAGACTCTTAgaatctgtatcaaacacagatgacgta..ATCTCAAG...........GtTGCGGGTTCGACCCCCGCGTTGGGCT tRNA-Lys-CTT-1-4 Sc: 76.1 GCCCGGCTAGCTCAATCGGT.AGAGCGTGAGACTCTTAgaaactgcctcaaaagcagaatcatgtg.ATCTCAAG...........GtTGCGGGTTCGACCCCCGCGTTGGGCT tRNA-Lys-CTT-1-1 Sc: 76.0 GCCCGGCTAGCTCAATCGGT.AGAGCGTGAGACTCTTAagtctggtgcaaaatagcagaattcgtg.ATCTCAAG...........GtTGCGGGTTCGACCCCCGCGTTGGGCT tRNA-Lys-CTT-1-2 Sc: 76.0 GCCCGGCTAGCTCAATCGGT.AGAGCGTGAGACTCTTAgaatccgcaataaaacgcggaattcgtacATCTCAAG...........GtTGCGGGTTCGACCCCCGCGTTGGGCT tRNA-Lys-CTT-1-3 Sc: 76.0 >>>>>>>..>>.>.........<.<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGCTGGCACAATTGGTtAGCGCGTGGGCCTTTTA.............................AGCCCAAG...........GtTGAGAGTTCGAGCCTCTCGTCGGGCG tRNA-Lys-TTT-1-1 Sc: 75.8 GCCCGGCTGGCACAATTGGTtAGCGCGTGGGCCTTTTA.............................AGCCCAAG...........GtTGAGAGTTCAAGCCTCTCGTCGGGCG tRNA-Lys-TTT-2-1 Sc: 74.8
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>......................................................<<<<................>>>>>.......<<<<<<<<<<<<. GCTTTCGTGGCTCAGTTGGCtA.GAGCGTTGGTCTCATAtacaatatgtctatatgaaacaactgcattacaacagttggggttATCCAAAG...........GtCGTGAGTTCGAGCCTCACCGAGAGCA tRNA-Met-CAT-1-1 Sc: 74.7 GTCTTCTTGGCTTAGTTGGTtA.AAGCGTCGGTCTCATAaagctctgtttatgatcagtttggtaacaatctggca........ATCCGAAG...........GtCGTGAGTTCGACCCTCACAGAGGACA tRNA-Met-CAT-2-1 Sc: 71.3 >>>>>>>..>>>>..........<<<<.>>>>>....................................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGCAATGTGGCGCAGC.GGA.A.GCGCGCCGGGCTCATA.............................................ACCCGGAG...........GtCCCTGGATCGAAACCAGGCATTGCTA tRNA-iMet-CAT-1-1 Sc: 69.6 AGCAATGTGGCGCAGC.GGA.A.GCGCGCCGGGCTCATA.............................................ACCCGGAG...........GtCCCTGGATCGAAACCAGGCATTGCTA tRNA-iMet-CAT-1-2 Sc: 69.6 AGCAATGTGGCGCAGC.GGA.A.GCGCGCCGGGCTCATA.............................................ACCCGGAG...........GtCCCTGGATCGAAACCAGGCATTGCTA tRNA-iMet-CAT-1-3 Sc: 69.6
Phe tRNAs
>>>>>>>..>>>.............<<<.>>>>>....................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GTTACGATGCCGGAGT.GGTctA.ACGGGCAAGTCTAAAAtctacct......................AACTTGA.TT...........C.CGTCGGTTCGAATCCGAC.TCGTGACA tRNA-Phe-AAA-2-1 Sc: 57.2 >>>>>>>..>>>>...........<<<<.>>>>>....................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GTTACGATGCCAGAGT.GGTctA.TTGGGCAAGTTTAAAGattc.........................AACTTGAT.............TtCGTCGGTTCAAATCCGAC.TCGTAGCA tRNA-Phe-AAA-1-1 Sc: 45.0 >>>>>>>..>>>>...........<<<<.>>>>>....................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GCGGCTTTAGCTCACTTGGG..A.GAGCGCCAGACTGAAGtaaactttagatcattgatt.........ATCTGGAG.............GcACTGTGTTCGATCCACAG.AAGCCGCA tRNA-Phe-GAA-1-1 Sc: 59.3 GCGGCTTTAGCTCACTTGGG..A.GAGCGCCAGACTGAAGtcaacttcggaattacacgatc.......ATCTGGAG.............GcACTGTGTTCGATCCACAG.AAGCCGCA tRNA-Phe-GAA-1-2 Sc: 59.2 GCGGCTTTAGCTCACTTGGG..A.GAGCGCCAGACTGAAGtcaacttcagaaccacaacacgtctgtttATCTGGAG.............GcACTGTGTTCGATCCACAG.AAGCCGCA tRNA-Phe-GAA-1-3 Sc: 59.0
Pro tRNAs
>>>>>>>..>>>..........<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCCATTGGTCTAGTGGTA.TGATTCTCGCTTAGGGaacactctaagttcaaaatacttaat....TGCGAGAG...........GcCCCGCGTTCGAATCGCGGATGGACCC tRNA-Pro-AGG-1-1 Sc: 59.2 GGTCCAATGGTCTAGAGGTA.TGATTCTCGCTTAGGGtacactctaagtacatttcact........TGCGAGAG...........GcCCCGCGTTCGACTCGCGGTTGGACCC tRNA-Pro-AGG-2-1 Sc: 52.4 >>>>>>>..>>>..........<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTCAATGGTCTAGTGGTA.TGATTGCTGCTTCGGGttacaccctctttcgttagagagaactgtaTGTGGCAG...........GcCCCGGGTTCAAATCCCGGTTGAGCCC tRNA-Pro-CGG-1-1 Sc: 52.4 >>>>>>>..>>>..........<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTCAATGGTCTAGTGGTA.TGATTCTCGCTTTGGGattgatcagttcatctgattaaaaaga...TGTGAGAG...........GtCTCCGGTTCAATCCCGGATTGAGCCC tRNA-Pro-TGG-1-1 Sc: 54.2 GGCTCAATGGTCTAGTGGTA.TGATTCTCGCTTTGGGattgatcagttcatctggtcaagaaga...TGTGAGAG...........GtCTCCGGTTCAATCCCGGATTGAGCCC tRNA-Pro-TGG-1-2 Sc: 54.2 GGCTCAATGGTCTAGTGGTA.TGATTCTCGCTTTGGGtacagtctacaattagtgggctgtcacta.TGTGAGAG...........GtCTCCGGTTCAATCCCGGATTGAGCCC tRNA-Pro-TGG-1-3 Sc: 54.2 GGCTTAATGGTCTAGTGGTA.TGATTCTCGCTTTGGGattgatcagttcatctgatcaaaaaga...TGTGAGAG...........GtCTCCGGTTCAATCCCGGATTGAGCCC tRNA-Pro-TGG-2-1 Sc: 51.1
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>........................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCCAGATGGCGGAGTGGTt.A.TCGCGTTAGCCTAGAA.................................................................AGCTAAT.TCCTTC.......GGGAG.CACAGGTTCGAGTCCTGT.TCTGGTCG tRNA-Ser-AGA-2-1 Sc: 72.4 GGCCAGATGGCGGAGTGGTt.A.TCGCGTTAGCCTAGAA.................................................................AGCTAAT.TCCTTC.......GGGAG.CACAGGTTCGAGTCCTGT.TCTGGTCG tRNA-Ser-AGA-2-2 Sc: 72.4 GGCCAGATGGCGGAGTGGTt.A.TCGCGTTAGCCTAGAA.................................................................AGCTAAT.TCCTTC.......GGGAG.CGCAAGTTCGAATCTTGT.TCTGGTCG tRNA-Ser-AGA-1-1 Sc: 68.4 >>>>>>>..>>>............<<<.>>>>>........................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GTCGCGATGCCAGAGTGGTt.A.ATGGGTATGACTCGAAatgcttccttaccgaagcagataagat......................................ATCATAT.GGTTTC.......GGCCG.CGTAGGTTCAAATCCTGC.TCGCGACG tRNA-Ser-CGA-1-1 Sc: 63.4 >>>>>>>..>>>>..........<<<<.>...>........................................................................<...<......................>>>>>.......<<<<<.<<<<<<<. GGTTTCATGGTGTAGGGGTt.A.GCGTAA...GTTTTCActcgaaagatgtgattatttatgtgttccacatcctgacaatgtatacagacgatagattctgatTCTG.TAG.................A.CTCGGGTTCGATTCCCGA.TGAGACCT tRNA-Ser-CGA-2-1 Sc: 31.7 >>>>>>>..>>>............<<<.>>>>>........................................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<. GTCGCGATGCCAGAGTGGTt.A.ATGGGTAAGACTTGAAtgcgtctgcatcagat.................................................ATCTTATGGTTT.........CGGCCtCGTAGGTTCAAATCCTGC.TCGCGACG tRNA-Ser-TGA-1-1 Sc: 58.8 GTCACTATGCCAGAGTGGTt.A.ATGGGTAAGACTTGAAtgcttctgcatcagat.................................................ATCTTATGGTTT.........CGGCCtCGTAGGTTCAAATCCTGC.TGGTGACG tRNA-Ser-TGA-2-1 Sc: 54.7 >>>>>>>..>>>............<<<.>>>>>........................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCACTTTGGCGGAGTGGTt.A.ACGCGATGGCCTGCTAttgttacaagcaaagcattc.............................................AGCCATT.TCCTTC.......GGGAG.CGAGTGTTCGAATCACTC.AGGTGTCG tRNA-Ser-GCT-1-1 Sc: 58.4 GGCACTTTGGCGGAGTGGTt.A.ACGCGATGCCCTGCTAttgtcgcaagatgaagctagatc..........................................AGGCATT.TCCTTC.......GGGAG.CAAGAGTTCGAATCTCTT.AGGTGTCG tRNA-Ser-GCT-2-1 Sc: 55.2 >>>>>>>..>>>............<<<.>>>>>........................................................................<<<<<......................>>>>>.......<<<<<.<<<<<<<. GTCGCGATGCCAGAGTGGTttA.ATGGGCCAGTCTGCTAatgttgcctttacggcacagcg...........................................AACTGGT.....TT...........G.CGTCGGTTCGAATCCGGC.TCGCGGCA tRNA-Ser-GCT-3-1 Sc: 54.5
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>..........................................................................................<<<<<................>>>.>>.......<<<<<<<<<<<<. GCCCTCGTAGCTCAATGGTA.GAGCGCGTCACTAGTAatgag..............................................................................ATGACGAG...........GtCGCC.AGTTCAATTCTGGTCGAGGGCT tRNA-Thr-AGT-1-1 Sc: 72.6 >>>>>>>..>>>>........<<<<.>>>>>..........................................................................................<<<<<................>.>.>>.......<<<.<<<<<<<<. GCCCTCGTAGCTCAATGGTA.GAGCGCGTCACTAGTAatcttgaagattatgta..................................................................ATGACGAG...........GtTGCC.GGTTCGATTCCGTCCGAGGGCA tRNA-Thr-AGT-2-1 Sc: 70.2 GCCCTCGTAGCTCAATGGTA.GAGCGCGTCACTAGTAaactcactatcacgtgat.................................................................ATGACGAG...........GtTGCC.GGTTCGATTCCGTCCGAGGGCA tRNA-Thr-AGT-2-3 Sc: 70.2 GCCCTCGTAGCTCAATGGTA.GAGCGCGTCACTAGTAattccacactcacgtgagatcacgtg.........................................................ATGACGAG...........GtTGCC.GGTTCGATTCCGTCCGAGGGCA tRNA-Thr-AGT-2-2 Sc: 69.9 >>>>>>>..>>>..........<<<.>>>>>..........................................................................................<<<<<................>>>.>>.......<<<<<<<<<<<<. GTCTGGATGGTGCAGTGGTA.TCATACTGAAGGGGTAtacatggccaaattagcgagagcgttgatttatttgtttgttgttgagttgtcgatttatattattaacaggcatatgtacccCTTCAGAG...........A.CGGGtGGTTCGATTCCCCCTCCAGACA tRNA-Thr-GGT-1-1 Sc: 35.9 >>>>>>>..>>>..........<<<.>>>>>..........................................................................................<<<<<................>>>.>>.......<<<<<<<<<<<<. GCCTTCATGGCGCAGTGGTA.ACGCGTCGCACTTGTAtaccactcttggcatgaa.................................................................ATGCGAAG...........AtCCCT.AGTTCAATTCTGGGTGAAGGCA tRNA-Thr-TGT-1-1 Sc: 71.6 GCCTTCATGGCGCAGTGGTA.ACGCGTCGCACTTGTAtgattcctactgcatgggaagaatagag.......................................................ATGCGAAG...........AtCCCT.AGTTCAATTCTGGGTGAAGGCA tRNA-Thr-TGT-1-2 Sc: 71.2
Trp tRNAs
>>>>>>>..>>>>........<<<<..>>>............................<<<.................>>>>>.......<<<<<<<<<<<<. GGGGGATTGGTGTAGTGGTA.GCATGTTGGATTCCAGtttctcacaagatggaaatACCCATTG...........GtCGTCGGTTCAAATCCGGCATCCCTCA tRNA-Trp-CCA-1-1 Sc: 48.5 GGGGGATTGGTGTAGTGGTA.GCATGTTGGATTCCAGtttctcacaagatggaagtACCCATTG...........GtCGTCGGTTCAAATCCGGCATCCCTCA tRNA-Trp-CCA-1-2 Sc: 48.5
Tyr tRNAs
.>>>>>>....>>>............<<<.>.>>>..........................................................................<<<.<................>>>>>.......<<<<.<<<<<<.<.. ACTCTCATtaGGTCTAGTTGGTttATGGCGTCCGGCTGTAAttgtttcagtctcaccggaatggtatgtttcaccttaaaacaatcaactcaggcgatgtgctaacacATCGAATA...........GtCGGGGGTTCGACTCTCCcCTGAGG.GAA tRNA-Tyr-GTA-1-1 Sc: 25.7 >>>>>>>....>>>............<<<.>.>>>..........................................................................<<<.<................>>>>>.......<<<<.<<<<<<.<<. ATCTTCATtaGGTCTAGTTGGTttATGGCGTCCGGCTGTAAttgtttcagtctcaccggaatggtatgtcaaaatccgaaattcaactcaggcgatatgctaacat..ATCGAATA...........GtCGGGGGTTCGACTCTCCcCTGAGGgATT tRNA-Tyr-GTA-2-1 Sc: 22.4
Val tRNAs
>>>>>>>..>>>............<<<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCGGGTGGTGTAGTTGGTtA.TCACATCTCGTTAACAtcgttaacacttgtt...............................................CCGAGAAG...........GtCCTGGGATCGAGCCCCAGCCTGATCA tRNA-Val-AAC-1-4 Sc: 64.5 GGTCGGGTGGTGTAGTTGGTtA.TCACATCTCGTTAACAttggttaacatcaaata.............................................CCGAGAAG...........GtCCTGGGATCGAGCCCCAGCCTGATCA tRNA-Val-AAC-1-1 Sc: 64.4 GGTCGGGTGGTGTAGTTGGTtA.TCACATCTCGTTAACAttggttaacatcaaaata............................................CCGAGAAG...........GtCCTGGGATCGAGCCCCAGCCTGATCA tRNA-Val-AAC-1-2 Sc: 64.4 GGTCGGGTGGTGTAGTTGGTtA.TCACATCTCGTTAACAttggttaacatcaaaata............................................CCGAGAAG...........GtCCTGGGATCGAGCCCCAGCCTGATCA tRNA-Val-AAC-1-3 Sc: 64.4 >>>>>>>..>>>>..........<<<<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCGGTTGGTCTAGT.GGT.A.AGACGCTTCTCTCACAccgtgccttcctggtcctcaatggagtcccaccactgttgggggccgggggggtgtcgcgggCAGAAGAG...........AtCATCAGTTCGATCCTGATATTGAGCA tRNA-Val-CAC-3-1 Sc: 57.9 >>>>>>>..>>>............<<<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGTCGCATGGTCTAAT.GGTtA.TGATATCTCGTTCACAagtactgaacatgtc...............................................CCGAGATG...........GtTCTGAGTTCGATCCTCAGTGCGACTA tRNA-Val-CAC-1-1 Sc: 56.5 GCTCGATTGGTCAAGT.GGT.A.AGACGCTTCTCTCACAtggtctaaccaggtctgtaatgtttattattacgttggtgaggtccaagtg...........CAGAAGAG...........AtCATCAGTTCGAACCTGGTATTGAGCA tRNA-Val-CAC-2-1 Sc: 53.7 >>>>>>>..>>>............<<<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGACTATTGGTGTAGT.GGTtA.TCACGTCACTTTTACAtgatcactaagtttccttagttgtttaacagat.............................CAGTGAAG...........GtCCCAGGTTCGATCCCTGGATGGTTCA tRNA-Val-TAC-1-1 Sc: 61.3