tRNA Gene Summary

Overview
High confidence set 697
tRNAs decoding standard 20 AA 697
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 3
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 244
Secondary filter (low feature scores, possible rep. element) 131

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 38)
Met CAT
18
Tyr GTA
20
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
24
GGC
 
CGC
8
TGC
17
49
GlyACC
 
GCC
29
CCC
9
TCC
18
56
ProAGG
19
GGG
 
CGG
5
TGG
24
48
ThrAGT
9
GGT
 
CGT
4
TGT
10
23
ValAAC
21
GAC
 
CAC
13
TAC
9
43
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
15
GGA
 
CGA
6
TGA
11
ACT
 
GCT
23
 
 
 
 
55
ArgACG
13
GCG
 
CCG
5
TCG
9
 
 
 
 
CCT
13
TCT
14
54
LeuAAG
16
GAG
 
CAG
7
TAG
9
 
 
 
 
CAA
13
TAA
8
53
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
21
 
 
 
 
21
AsnATT
 
GTT
22
 
 
 
 
22
Lys 
 
 
 
CTT
21
TTT
19
40
AspATC
 
GTC
32
 
 
 
 
32
Glu 
 
 
 
CTC
24
TTC
18
42
HisATG
 
GTG
17
 
 
 
 
17
Gln 
 
 
 
CTG
13
TTG
12
25
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
25
GAT
 
CAT
 
TAT
8
33
iMet/Met 
 
 
 
CAT
14/19
 
 
33
TyrATA
 
GTA
20
 
 
 
 
20
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
14
 
 
 
 
14
Trp 
 
 
 
CCA
17
 
 
17
SelCys 
 
 
 
 
 
TCA
 
0