tRNA Gene Summary

Overview
High confidence set 697
tRNAs decoding standard 20 AA 697
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 3
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 244
Secondary filter (low feature scores, possible rep. element) 131

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 46)
Val GAC
1
Ser GCT
1
Lys TTT
1
Ile AAT
1
Met CAT
19
Tyr GTA
21
Supres TTA
1
Cys GCA
1
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
25
GGC
 
CGC
9
TGC
27
61
GlyACC
 
GCC
31
CCC
9
TCC
19
59
ProAGG
23
GGG
 
CGG
5
TGG
28
56
ThrAGT
14
GGT
2
CGT
4
TGT
12
32
ValAAC
26
GAC
4
CAC
14
TAC
10
54
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
15
GGA
2
CGA
6
TGA
14
ACT
3
GCT
35
 
 
 
 
75
ArgACG
16
GCG
1
CCG
6
TCG
9
 
 
 
 
CCT
15
TCT
19
66
LeuAAG
17
GAG
 
CAG
8
TAG
13
 
 
 
 
CAA
20
TAA
10
68
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
3
GAA
24
 
 
 
 
27
AsnATT
2
GTT
28
 
 
 
 
30
Lys 
 
 
 
CTT
30
TTT
24
54
AspATC
3
GTC
48
 
 
 
 
51
Glu 
 
 
 
CTC
26
TTC
20
46
HisATG
 
GTG
18
 
 
 
 
18
Gln 
 
 
 
CTG
16
TTG
17
33
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
207
GAT
3
CAT
 
TAT
9
219
iMet/Met 
 
 
 
CAT
14/26
 
 
40
TyrATA
1
GTA
24
 
 
 
 
25
Supres 
 
TCA
1
CTA
 
TTA
2
3
CysACA
2
GCA
18
 
 
 
 
20
Trp 
 
 
 
CCA
20
 
 
20
SelCys 
 
 
 
 
 
TCA
 
0