tRNA Gene Summary

Overview
High confidence set 715
tRNAs decoding standard 20 AA 715
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 17
Unexpected anticodons 5
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 110
Secondary filter (low feature scores, possible rep. element) 250

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 39)
Phe GAA
3
Met CAT
17
Tyr GTA
19
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
24
GGC
 
CGC
8
TGC
18
50
GlyACC
 
GCC
28
CCC
9
TCC
18
55
ProAGG
18
GGG
 
CGG
5
TGG
22
45
ThrAGT
15
GGT
 
CGT
5
TGT
11
31
ValAAC
25
GAC
 
CAC
10
TAC
12
47
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
19
GGA
 
CGA
5
TGA
11
ACT
 
GCT
26
 
 
 
 
61
ArgACG
10
GCG
 
CCG
4
TCG
9
 
 
 
 
CCT
8
TCT
11
42
LeuAAG
18
GAG
 
CAG
7
TAG
8
 
 
 
 
CAA
14
TAA
9
56
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
26
 
 
 
 
26
AsnATT
 
GTT
26
 
 
 
 
26
Lys 
 
 
 
CTT
17
TTT
24
41
AspATC
 
GTC
36
 
 
 
 
36
Glu 
 
 
 
CTC
19
TTC
19
38
HisATG
 
GTG
14
 
 
 
 
14
Gln 
 
 
 
CTG
10
TTG
12
22
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
28
GAT
 
CAT
 
TAT
8
36
iMet/Met 
 
 
 
CAT
15/18
 
 
33
TyrATA
 
GTA
19
 
 
 
 
19
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
19
 
 
 
 
19
Trp 
 
 
 
CCA
18
 
 
18
SelCys 
 
 
 
 
 
TCA
 
0