tRNA Gene Summary

Overview
High confidence set 715
tRNAs decoding standard 20 AA 715
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 17
Unexpected anticodons 5
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 110
Secondary filter (low feature scores, possible rep. element) 250

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 53)
Pro TGG
1
Ser TGA
2
Ser GCT
3
Arg CCT
1
Phe GAA
3
Asn ATT
1
Lys TTT
1
Asp GTC
2
Gln CTG
1
Met CAT
17
Tyr GTA
20
Supres TTA
1
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
28
GGC
 
CGC
10
TGC
20
58
GlyACC
 
GCC
35
CCC
11
TCC
23
69
ProAGG
20
GGG
 
CGG
13
TGG
31
64
ThrAGT
17
GGT
3
CGT
5
TGT
13
38
ValAAC
29
GAC
15
CAC
11
TAC
12
67
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
24
GGA
9
CGA
10
TGA
19
ACT
 
GCT
37
 
 
 
 
99
ArgACG
26
GCG
2
CCG
4
TCG
9
 
 
 
 
CCT
14
TCT
20
75
LeuAAG
19
GAG
 
CAG
10
TAG
12
 
 
 
 
CAA
29
TAA
12
82
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
43
 
 
 
 
43
AsnATT
7
GTT
43
 
 
 
 
50
Lys 
 
 
 
CTT
18
TTT
32
50
AspATC
2
GTC
55
 
 
 
 
57
Glu 
 
 
 
CTC
30
TTC
27
57
HisATG
3
GTG
24
 
 
 
 
27
Gln 
 
 
 
CTG
11
TTG
17
28
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
30
GAT
2
CAT
 
TAT
12
44
iMet/Met 
 
 
 
CAT
16/50
 
 
66
TyrATA
4
GTA
28
 
 
 
 
32
Supres 
 
TCA
 
CTA
7
TTA
1
8
CysACA
7
GCA
25
 
 
 
 
32
Trp 
 
 
 
CCA
31
 
 
31
SelCys 
 
 
 
 
 
TCA
 
0