tRNA Gene Summary

Overview
High confidence set 287
tRNAs decoding standard 20 AA 279
Selenocysteine tRNAs (TCA) 8
Notable atypical predictions  
Anticodon/isotype mismatch 6
Unexpected anticodons 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 24508
Secondary filter (low feature scores, possible rep. element) 4155

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 17)
Arg TCT
4
Leu CAA
3
Ile TAT
3
Tyr GTA
7
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
25
GGC
 
CGC
5
TGC
5
35
GlyACC
 
GCC
9
CCC
3
TCC
4
16
ProAGG
7
GGG
 
CGG
3
TGG
5
15
ThrAGT
8
GGT
 
CGT
4
TGT
4
16
ValAAC
7
GAC
 
CAC
6
TAC
3
16
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
6
GGA
 
CGA
3
TGA
3
ACT
 
GCT
7
 
 
 
 
19
ArgACG
5
GCG
 
CCG
3
TCG
4
 
 
 
 
CCT
5
TCT
5
22
LeuAAG
4
GAG
 
CAG
5
TAG
2
 
 
 
 
CAA
4
TAA
2
17
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
5
 
 
 
 
5
AsnATT
 
GTT
10
 
 
 
 
10
Lys 
 
 
 
CTT
11
TTT
8
19
AspATC
 
GTC
7
 
 
 
 
7
Glu 
 
 
 
CTC
4
TTC
6
10
HisATG
 
GTG
6
 
 
 
 
6
Gln 
 
 
 
CTG
6
TTG
3
9
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
7
GAT
 
CAT
 
TAT
3
10
iMet/Met 
 
 
 
CAT
6/7
 
 
13
TyrATA
 
GTA
7
 
 
 
 
7
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
21
 
 
 
 
21
Trp 
 
 
 
CCA
6
 
 
6
SelCys 
 
 
 
 
 
TCA
8
8