Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>.>..>>>...........<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<.<.<<<<<. GGGCATATGGTCTAGT.GGTA.TGATGCACCCTTAGCAcatttcgagtc.........TGGGTGAG...........GtCCCCGGTTCAATTCCGGG.TTTGTCCA tRNA-Ala-AGC-1-1 Sc: 60.1 GGGCATATGGTCTAGT.GGTA.TGATGCACCCTTAGCAccattacgagtc........TGGGTGAG...........GtCCCCGGTTCAATTCCGGG.TTTGTCCA tRNA-Ala-AGC-1-2 Sc: 60.1 GGGCATATGGTCTAGT.GGTA.TGATGCACCCTTAGCAccttccgagtc.........TGGGTGAG...........GtCCCCGGTTCAATTCCGGG.TTTGTCCA tRNA-Ala-AGC-1-3 Sc: 60.1 >>>>>>>..>>>...........<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGGCGCTTGGTCTAGG.GGTA.TGATTTTCGCTTCGCAtattccttgaatatcaca..TGTGAAAG...........GtCGTGGGTTCAATTCCCAC.AGCGTCCA tRNA-Ala-CGC-1-1 Sc: 59.9 GGGTTCTTGGTCTAGG.GGTA.TGATTTTCGCTTCGCAtgttcctctggaacgcggcaTGTGAAAG...........GtCGTGGGTTCAATTCCCAC.AGGATCCA tRNA-Ala-CGC-2-1 Sc: 56.0 >>>>>>>..>>>>.........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGGGTTGTAGCTCAGT.GGTA.GAGCGCCCGCTTTGCAtattctgaa...........TGCGGGAG...........GtCTTGGGTTCAATCCCCAA.CAGCTCCA tRNA-Ala-TGC-1-1 Sc: 69.4 GGGGATATAGTTTAATTGGTA.AAACTGCGATTTTGCA....................TATCGTT............AtTTTAGGATCGAGTCCTAA.TATCTCCA tRNA-Ala-TGC-2-1 Sc: 42.3
Arg tRNAs
>>>>>>>..>>>>.........<<<<........>>>>>................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTGCTGGCTCAATGGC.A.GAGCG.......CCTGACTACGAtcacggttccaatggttccagagtcc...............................................ATCAGGAG...........GtTCCAGGTTCGAGCCCTGGGTAGGTCA tRNA-Arg-ACG-1-1 Sc: 72.9 GGCCTGCTAGCTCAATGGT.A.GGGCG.......TCTGACTACGAtcacggttccaacaacagttccagagtcg............................................ATCAGGAG...........GtTCCAGGTTCGAGCCCTGGGTAGGTCA tRNA-Arg-ACG-2-1 Sc: 71.1 AACGTGTTAACTCAATGGAtA.GAGTA.......TTGTGCTACGG.........................................................................ACACAAAA...........GtTACAAGTTCGAGTCTTGTACACGTTT tRNA-Arg-ACG-3-1 Sc: 48.4 >>>>>>>..>>>>.........<<<<........>>>.>................................................................................<.<<<................>>>>>.......<<<<<<<<<<<<. GGGGTTGTAGCTCAGTGGT.A.GAGCGcgtatg.TTCCTCTGCGGttcccaagttgatctttacaatactaattgctcgccagccgctttgcatggacgatcattcgtttcagccgatTGCGGGAG...........GtCTTGGGTTCAATCCCCAACAGCTCCA tRNA-Arg-GCG-1-1 Sc: 42.7 >>>>>>>..>>>>.........<<<<........>>>>>................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCACCGTGGCCTAATGGT.A.AGGCG.......TTGCTTTCCGGttttgaggagta.............................................................TGGCAAAG...........AtTGTGGGTTCGAGTCCCATCGGTGTCG tRNA-Arg-CCG-2-1 Sc: 55.4 GGCTTCGTGGCCTAATGGT.A.AGGCG.......TTGCTTTCCGGtacaaggatca..............................................................TGGCAAAG...........AtTGTGGGTTCGAGTCCCATCGGGGTCG tRNA-Arg-CCG-1-1 Sc: 52.7 >>>>>>>..>>>>.........<<<<........>>>>>................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GACCGTTTGGCTCAATGGT.A.GAGCG.......TCCGCCTCCTAcgtaatgattacgttatca......................................................AGCGGAAG...........GcTGTGGGTTCGAGTCCCATGATGGTCG tRNA-Arg-CCT-1-1 Sc: 65.9 GACCGTTTGGCTCAATGGT.A.GAGCG.......TCCGCCTCCTAcgttaaaattacgtcattc......................................................AGCGGAAG...........GcTGTGGGTTCGAGTCCCATGATGGTCG tRNA-Arg-CCT-1-2 Sc: 65.9 ATCCCAATAGCTTAATGGT.A.AAGCT.......TGATTCTCCTA.........................................................................AAATTATT...........A.TTCAAGTTCAAATCTTGATTGGGATA tRNA-Arg-CCT-2-1 Sc: 42.6 .>>>>>>..>>>>.........<<<<........>>>>>................................................................................<<<<<................>>>>>.......<<<<<<<<<<<.. CTCTTACTAGCTTAATGGT.A.GAGCA.......GGATACTTCTA.........................................................................ATATCTGG...........A.TCTAAGTTCGAGTCTTAGGTAAGAAT tRNA-Arg-TCT-1-1 Sc: 48.8 >>>>>>>...>>...........<<..........>>>>................................................................................<<<<.................>>>>>.......<<<<<<<<<<<<. TCCTCGATGGTCTAGTGGCtA.TGAGTgagtttcACCGTCTTCTCcgacttctaagtcctcccactaacaaaatgttagtttccgcttgtcaagattcctctgagcaagc........CGCGGGAG...........A.CCTGGGTTCGATTCCCAGTCGGGGAG tRNA-Arg-TCT-2-1 Sc: 32.2
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCTCCGTGGCGCAATTGGCtA.GCGCGTTCGGCTGTTAgctctcagatgagcaagca..ACCGGAAG...........GtTGACAGTTCAAGCCTGTCCGGGGGAG tRNA-Asn-GTT-1-1 Sc: 60.4 >>>>>>>..>>.>..........<.<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCCTGTGGCACAATTGGCtA.GCGCGTTCGGCTGTTAactctccaatggaagggta..ACCGGAAG...........GtTGGTGGTTCGAGCCCACCCGGGGGAG tRNA-Asn-GTT-2-1 Sc: 59.7 >>>>>>>..>>>>..........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCTCTGTGGCGCAATTGGCtA.GCGCGTTCGGCTGTTAatcctctacaaggagaagcaaACCGGAAG...........GtTTCAAGTTCGAATCTTGGCAGGGGAG tRNA-Asn-GTT-3-1 Sc: 58.4 TCCTTCTTGGCGCAATTGGCtA.GCGCGTTCGGCTGTTActctagtacaaagagaagcaaACCGGAAG...........GtTTCAAGTTCGAATCTTGGAGAGGGAG tRNA-Asn-GTT-4-1 Sc: 57.2 GCCTTTATAGCTCAAC.GGT.A.GAGCGGAATACTGTTA.....................ATATTCTG...........A.TATATGTTCAATTCATATTAAGGGCT tRNA-Asn-GTT-5-1 Sc: 56.7
Asp tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>........................<<<<<...............>>>>>.......<<<<<<<<<<<<. TGGCCGTTAGTTCAATTGGTtgAGAATACACGCCCGTCTgtcacccactgcggaacCGCGTGTG...........ATCCATGTTCGAGTCGTGGACGGCCAG tRNA-Asp-GTC-1-1 Sc: 35.0 TGGCCGTTAGTTCAATTGGTtgAGAATACACGCCCGTCTgttaccctttgcggaacCGCGTGTG...........ATCCATGTTCGAGTCGTGGACGGCCAG tRNA-Asp-GTC-1-2 Sc: 35.0
Cys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCTTTAGCTCAGTGGTA.GAGCGTGGGATTGCAGttacacagctcaatcATCCTAAG...........GtCGCTTGTTCGAACCAGGCAGGGAGCT tRNA-Cys-GCA-1-1 Sc: 67.2 GCTCCTTTAGCTCAGTGGTA.GAGCGTGGGATTGCAGtatcacacttcaatcATCCTAAG...........GtCGCTTGTTCGAACCAGGCAGGGAGCT tRNA-Cys-GCA-1-2 Sc: 67.2
Gln tRNAs
>>>>>>>..>>>...........<<<.>>>>>.................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTCTATAGTGTAGCGGTcA.TCACATCGGATTCTGAagttttttcggcatc...........................TTCCGGGA...........ACCCCGGTTCGATTCCGGGTAGGACCT tRNA-Gln-CTG-1-1 Sc: 58.0 GGTTCTATAGTGTAGCGGTcA.TCACATCGGATTCTGAagtttcttcggcacc...........................TTCCGGGA...........ACCCCGGTTCGATTCCGGGTAGGACCT tRNA-Gln-CTG-1-2 Sc: 58.0 GGTTCTATAGTGTAGCGGTcA.TCACATCGGATTCTGAagtttcttcggcatc...........................TTCCGGGA...........ACCCCGGTTCGATTCCGGGTAGGACCT tRNA-Gln-CTG-1-3 Sc: 58.0 >>>>>>>..>>>...........<<<.>>>>>.................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTTTGTAGTGTAGTGGTgA.TCACTCCGGATTTTGAagttttccgcctgtgtgaaggcctggataaacgaaggaaaccTTCCGGCA...........ACCCCGGTTCGAACCCGGGCAAGACCT tRNA-Gln-TTG-1-1 Sc: 60.0
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.........................................................................................<<<<<................>>>>>...........<<<<<.<<<<<<<. TCCGGCGTGGTCTAGTGGCtA.GGATTTGTCGCTCTCActtgccgaaaaggaggt.................................................................CCGACAAG...........G.CCGGGGTTCGATT....CCCCG.CGCCGGAA tRNA-Glu-CTC-3-1 Sc: 64.0 TCCGGTGTGGTCTAGTGGCtA.GGATTTGTCGCTCTCActttcctaaagggaggt.................................................................CCGACAAG...........G.CCGGGGTTCGATT....CCCCG.CACCGGAA tRNA-Glu-CTC-1-1 Sc: 63.3 TCCGTAATGGTCTAGTGGCtA.GGATTTGTCGCTCTCActtctaaatagaaaaggc................................................................CCGACAAG...........G.CCAGGGTTCGATT....CCCTG.TTACGGAA tRNA-Glu-CTC-2-1 Sc: 61.8 >>>>>>>..>>>>.........<<<<.>>>.>.........................................................................................<.<<<................>>>...............<<<.<<<<<<<. TCCGTAATGGTCTAGTGGCtA.GGATTTGTCGCTCTCActtcccaagcggaagaggcccgacaaggccagggttaggtaagcattctcgacatactacaataaaaaatcaagtgaaactaACAATAT............T.TCAG......ATT....CCCTG.TTACGGAA tRNA-Glu-CTC-4-1 Sc: 28.7 >>>>>>>..>>>...........<<<.>>>>>.........................................................................................<<<<<................>>>>>...........<<<<<.<<<<<<<. GACCCACTAGTCAAGTGGTtA.AGACATGGCGTTTTCA..................................................................................CCGCTAC............AtCCTGGGTTCGAGT....CCCAG.GTGGGTTA tRNA-Glu-TTC-2-1 Sc: 55.8 >>>>>>>..>>>>.........<<<<.>>>>>.........................................................................................<<<<<................>>>>>...........<<<<<.<<<<<<<. TCGGATATGGTGTATCGGCtA.GCATCGCCCGCTTTCAactcgagagcg.......................................................................CCGGGCAG...........A.GCCGGGTTCGACT....CCCGG.TATCCGAA tRNA-Glu-TTC-1-1 Sc: 32.1
Gly tRNAs
>>>>>>>...>>...............<<..>>>.>...............................................................................<.<<<...............>>>>>.......<<<<<<<<<<<<. TCCTCGATGGTCTAGTGGCtAtgag.TGAGTTTCACCAATCAattcggacacctaaaagtcctcccactaacaacatgttagtttccgcttgtcaagatattatctctgcaagcCGCGGGAG...........ACCTGGGTTCGATTCCCAGTCGGGGAG tRNA-Gly-ACC-1-1 Sc: 28.0 TCCTCGATGGTCTAGTGGCtAtgag.TGAGTTTCACCAAACAattcggacacctaaagtccttccactaacaacatgttagtttccgcttgtcaagatattaatctctgcaagcCGCGGGAG...........ACCTGGGTTCGATTCCCAGTCGGGGAG tRNA-Gly-ACC-1-2 Sc: 28.0 >>>>>>>..>>>>.............<<<<.>>>>>...............................................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTTGATGGTTTAGTGGT.A.....AAATTGGCCGTTGCCAgcataggaaggagcgcagttcctccttaggaaggatcaca................................TCGGCCAG...........CCCCGGGTTCGATTCCCGGTCGACGCA tRNA-Gly-GCC-1-4 Sc: 55.8 GCGTTGATGGTTTAGTGGT.A.....AAATTGGCCGTTGCCActccgattcctaaataggaagtagcgcagctactccaggcaaaggacaaca.....................TCGGCCAG...........CCCCGGGTTCGATTCCCGGTCGACGCA tRNA-Gly-GCC-1-1 Sc: 55.4 GCGTTGATGGTTTAGTGGT.A.....AAATTGGCCGTTGCCAcccgattccttaataggaaggagctcaactccccctacaaaggaacaact......................TCGGCCAG...........CCCCGGGTTCGATTCCCGGTCGACGCA tRNA-Gly-GCC-1-2 Sc: 55.4 GCGTTGATGGTTTAGTGGT.A.....AAATTGGCCGTTGCCAccttgatctagaataagaaggagcgcagttccttcctgaacaggataata......................TCGGCCAG...........CCCCGGGTTCGATTCCCGGTCGACGCA tRNA-Gly-GCC-1-3 Sc: 55.4 >>>>>>>..>>>>.............<<<<.>>>>>...............................................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGGCCGTAGTTCAAGGGT.A.....GAATTCGAGCTTCCCAtgtcacagtggcagcctatcataggtcgaaaa........................................TGCTCGAG...........GACCGAGTTCGAGTCTCGGCGGCCGCA tRNA-Gly-CCC-1-1 Sc: 56.6 GCGGCCGTAGTTCAAGGGT.A.....GAATTCGAGCTTCCCAtgtcacaatggcagcctaccataggccgaaaa........................................TGCTCGAG...........GACCGAGTTCGAGTCTCGGCGGCCGCA tRNA-Gly-CCC-1-2 Sc: 56.6 GCGGCCGTAGTTCAAGGGT.A.....GAATTCGAGCTTCCCAtgtcacaatggcagcctaccataggccgaaaa........................................TGCTCGAG...........GACCGAGTTCGAGTCTCGGCGGCCGCA tRNA-Gly-CCC-1-3 Sc: 56.6 >>>>>>>..>>>>.............<<<<.>>>>>...............................................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTCGTTGGTCTAGTGGTtA.....GGATTATCGCCTTCCAttcattaagtagttcgtggcaatcccgagcgaaggactcgaat.............................AGCGATAG...........GGCGGGGTTCGATTCCCCGACGACGCA tRNA-Gly-TCC-1-1 Sc: 64.0 GCGTCGTTGGTCTAGTGGTtA.....GGATTATCGCCTTCCAttcattaagtagttcgtggcaatcccgagcgaaggactcgaat.............................AGCGATAG...........GGCGGGGTTCGATTCCCCGACGACGCA tRNA-Gly-TCC-1-2 Sc: 64.0 GCAACATTGGTCTAGTGGTtA.....GGATTATCGCCTTCCAttccgattcgaaatccgtagcccacaaggcgaaggactcggtg.............................AGCGATAG...........GGCGGGGTTCGATTCCCCGATGTTGCA tRNA-Gly-TCC-2-1 Sc: 62.2 >>>>>>>..>>>>.............<<<<..>>>>...............................................................................<<<<................>>>>>.......<<<<<<<<<<<<. ACGGCTATAGGTTAATGGT.A.....GACCGTTCGTCTTCCA........................................................................AACGATGT...........GCACCGATTCGAATTCGGTTGGCCGTA tRNA-Gly-TCC-3-1 Sc: 40.0
His tRNAs
>>>>>>>..>>>............<<<.>>>>>....................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGGCTGTGGCGTAGT.GGCtA.TCGCGCTTCGTTGTGGtactccacttgctCCGAAGAG...........GtCGCCTGTTCGATCCAGGCCAGTCGCA tRNA-His-GTG-1-1 Sc: 59.5 GCGGCTGTGGCGTAGT.GGCtA.TCGCGCTTCGTTGTGGtactccacttgctCCGAAGAG...........GtCGCCTGTTCGATCCAGGCCAGTCGCA tRNA-His-GTG-1-2 Sc: 59.5 >>>>>....>>>>..........<<<<.>>>>>....................<<<<<................>>>>>.......<<<<<..<<<<<. GGATG..TAGCTCAATAGGT.A.GAGCAACTGTATGTGG.............CACAGTAG...........GtTTTCTGTTCAAATCAGGA..TATCCA tRNA-His-GTG-2-1 Sc: 25.3
Ile tRNAs
>>>>>>>..>>>>.............................<<<<.................>>>>>.........................................................................<<<<<................>>>>>.......<<<<<..<<<<<<<. GGTCGGTTAGCTC.................AGTTGGT..A..GAGCG................TGGTGCTAATAgatcccaatcggtggtcctcgactcatctcaatagagttcgagaaaacgacgccagttgccttgagACGCCAAG...........GtCGCGAGTTCGACCCTCGT..ACTGACCA tRNA-Ile-AAT-1-1 Sc: 69.1 >.....>..>>>>.............................<<<<.................>>>>>.........................................................................<<<<<................>>>>>.......<<<<<..<.....<. G....ATTAGCTTctaacaagatcactaga.GTTGGTt.A..GAGCG................TGGTGCTAATA..................................................................ACGCCAAG...........GtCGCGAGTTCGACCCTCGT..A.....CT tRNA-Ile-AAT-2-1 Sc: 29.6 >.........>.................................<..................>>>>>.........................................................................<<<<<................>>>>>.......<<<<<........<. CTACCCT..ACCG.................AGTTGGTt.A..GAGCG................TGGTGCTAATA..................................................................ACGCCAAG...........GtCGCGAGTTCGACCCTCGT.....ACTGA tRNA-Ile-AAT-3-1 Sc: 22.6 >>>>>>>..>>>>.............................<<<<.................>>>>...........................................................................<<<<................>>>>>.......<<<<<..<<<<<<<. ACACCCATGACGC.................AGT.GGCttA..GCGTG................TCGTTCTTATAttggttcttcggaacacgtatggta.........................................ATGCGAAA...........GtCGCGAGTTCGAATCTCGC..TGGGTGTA tRNA-Ile-TAT-1-1 Sc: 54.1 ACACCCATGACGC.................AGT.GGCttA..GCGTG................TCGTTCTTATAttggttcttcggaacacgtatggta.........................................ATGCGAAA...........GtCGCGAGTTCGAATCTCGC..TGGGTGTA tRNA-Ile-TAT-1-2 Sc: 54.1 >>>>>>>...>>...............................<<..................>>>>...........................................................................<<<<................>>>>>.......<<<<<..<<<<<<<. TCCTCGATGGTCT.................AGT.GGCt.A..TGAGTgagtttcaccacaattTCCGACTTATAagtcctcccactaacaatgatgttagtttccgcttgtcaagaatcctcttagcaagc.........CGCGGGAG...........A.CCTGGGTTCGATTCCCAG..TCGGGGAG tRNA-Ile-TAT-2-1 Sc: 32.4
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>............................................<<<<<..>>...............<<...>>>>>.......<<<<<.<<<<<<<. GGTGAGATGGCCGAGCGGTctA.AGGCGCTAGCTTAAGGtgttcctgagctccaggatatcacatt..........CGCTAGT.CTGA..........A.AAGG.CGTGGGTTCGAATCCCAC.TCTCATCA tRNA-Leu-AAG-1-1 Sc: 61.2 GGTGAGATGGCCGAGCGGTctA.AGGCGCTAGCTTAAGGtgttcctggggttcaggatatcgcatt..........CGCTAGT.CTGA..........A.AAGG.CGTGGGTTCGAATCCCAC.TCTCATCA tRNA-Leu-AAG-1-2 Sc: 61.2 GGTGAGGTGGCCGAGTGGTctA.AGGCGCTAGCTTAAGGtattctttctcagtatctcagtactgat.........CGCTAGT.TCGA..........A.AGAG.CGCGAGTTCGAATCTCGC.CCTCATCA tRNA-Leu-AAG-2-1 Sc: 59.5 GGTGAGGTGGCCGAGTGGTctA.AGGCGCTAGCTTAAGGtattctttctcggtattaaatactgat..........CGCTAGT.TCGA..........A.AGAG.CGCGAGTTCGAATCTCGC.CCTCATCA tRNA-Leu-AAG-2-2 Sc: 59.5 >>>>>>>..>>>>..........<<<<.>>>>>............................................<<<<<..>>...............<<...>>>>>.......<<<<<.<<<<<<<. GGTGAGGTGGCCGAGTGGTt.A.TGGCGCTAGTTTCAGGtatagaatactatacgccgaaatggatcaacacacaaTACTAGTGGAGC..........A.ATCCtCGTGGGTTCGAGTCCCAC.CCTCATCA tRNA-Leu-CAG-1-2 Sc: 57.4 GGTGAGGTGGCCGAGTGGTt.A.TGGCGCTAGTTTCAGGtatagaacactatacgccgaaatggatcaacacacatTACTAGTGGAGC..........A.ATCCtCGTGGGTTCGAGTCCCAC.CCTCATCA tRNA-Leu-CAG-1-1 Sc: 57.3 >>>>>>>..>>>>..........<<<<.>>>>>............................................<<<<<..>>...............<<...>>>>>.......<<<<<.<<<<<<<. GGTAAGGTGTCCGAGTGGTt.A.TGGAGCTGCGTTTAGGtatttcctaagcagagat...................CCGCAGTGGC..GTT..........GCCtCGAGGGTTCGAATCCCTC.CCTTATCA tRNA-Leu-TAG-1-2 Sc: 51.4 GGTAAGGTGTCCGAGTGGTt.A.TGGAGCTGCGTTTAGGtttttcacctgagcagagat.................CCGCAGTGGC..GTT..........GCCtCGAGGGTTCGAATCCCTC.CCTTATCA tRNA-Leu-TAG-1-1 Sc: 51.3 >>>>>>>..>>>............<<<.>>>>>............................................<<<<<..>>>>..........<.<<<...>>>>>.......<<<<<.<<<<<<<. GCTATCGTGGCCGAGTGGTctA.AGGCGGTAGATTTAAGtttgttcttgaaa........................CTCTACTGGGGC..........GaCCCG.CGTGCGTTCGAACCGCAC.CGATAGCA tRNA-Leu-TAA-1-1 Sc: 63.4 GCTATCGTGGCCGAGTGGTctA.AGGCGGTAGATTTAAGtttgcttacttgaaaa.....................CTCTACTGGGGC..........GaCCCG.CGTGCGTTCGAACCGCAC.CGATAGCA tRNA-Leu-TAA-1-2 Sc: 63.2
Lys tRNAs
>>>>>>>..>>>>..........<<<<.>>.>>.........................................................................................<<.<.<................>>>>>.......<<<<<<<<<<<.<. GCCGGGGTAGCTCAATCGGT.A.GAGCGTGTGGCTCTTAgactactaggagtagtgaa...............................................................ACCTC.AAG...........GtCGCGGGTTCGAGCCCCGCCTTCGG.CT tRNA-Lys-CTT-1-1 Sc: 76.9 >>>>>>>..>>>............<<<.>.>.............................................................................................<..<................>>>>>.......<<<<<<<<<<<.<. GCCGGGGTAGCTCAAT.CGT...AAGCATCA..CCACGAcgatacgtcaactcaaaccactattctaactctccaccagggtagagcgtgtggctcttagactactaggagtagtgaa...ACCTC.AAG...........GtCGCGGGTTCGAGCCCCGCCTTCGG.CT tRNA-Lys-CTT-2-1 Sc: 46.7 >>>>>>>..>>>............<<<.....>.........................................................................................<.....................>>>>>.......<<<<<<<<<<<.<. GCCGGGGTAGCTCAAT.CGT...AAGCACC..ACCATCAgttacgatatcttcgaatcaatgattctaacaatcttccagggtagagcgtgtggctcttagactactaggagtagtgaaacCTCA...AG...........GtCGCGGGTTCGAGCCCCGCCTTCGG.CT tRNA-Lys-CTT-3-1 Sc: 46.5 >>>>>>>..>>.>..........<.<<.>>>>>.........................................................................................<<<<.<................>>>>>.......<<<<<<<<<<<.<. TCCCGCGTGGCACAATTGGTcA.GCGCGTTCGGCTTTTAtgttcgccatgtatatccatggatcgtt......................................................ACCGA.AAG...........GtTAGGAGTTCGAGCCTCCTCGTGGG.AG tRNA-Lys-TTT-1-1 Sc: 65.6 TCCCGCGTGGCACAATTGGTcA.GCGCGTTCGGCTTTTAtgttcgccatgtatttgcatggatcgtt......................................................ACCGA.AAG...........GtTAGGAGTTCGAGCCTCCTCGTGGG.AG tRNA-Lys-TTT-1-2 Sc: 65.6 >>>>>>>..>>>>..........<<<<.>>>>>.........................................................................................<<<<.<................>>>>>.......<<<<<<<<<<<.<. GAGAGCTTAACTTAAC.GGT.A.AAGTATGTGACTTTTA..................................................................................ATCATtGTA...........A.TATGAGTTCGAATCTCATAGCTCT.TA tRNA-Lys-TTT-2-1 Sc: 39.6 >>.>>>>..>>>>..........<<<<.>>>>>.........................................................................................<<<<.<................>>>>>.......<<<<<<<<<.<.<. TATAGCTTAACTTAAT.GGC.A.AAGTATATGACTTTTA..................................................................................ATCATtGTA...........A.TATGAGTTCGAATCTCATAGCTCTtAA tRNA-Lys-TTT-3-1 Sc: 33.0
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCAGGATAGTTCAATTGGTtAGAACATTAATTTCATGCATTAAGA...........A.TGAGAATTCGAATTTCTCTCCTGGTT tRNA-Met-CAT-1-1 Sc: 42.2 AAGGCTATAGCTTAATTGGT.AAAGCAAGCTGCTCATGATAGCTCA...........GaTGAGTGTTCGATTCATTCTGGCCTTA tRNA-Met-CAT-2-1 Sc: 32.7
Phe tRNAs
>>>>>.>..>>>............<<<.>>>>>..........................................................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGCATATGGTCTAGT..GGTA.TGATGCATCCTGAAAGtctccccgatatctcactgcccaaattcgtagcatactaacagtccctgcagtagcacctccgagtcTGGATGAG...........GtCCCCGGTTCAATTCCGGGTTTGTCCA tRNA-Phe-AAA-1-1 Sc: 49.1 GGGCATATGGTCTAGT..GGTA.TGATGCATCCTGAAAGtctccccgatatctccattcctcaattcgcagcatactaacagactctgcagtagcaccttgagtc.TGGATGAG...........GtCCCCGGTTCAATTCCGGGTTTGTCCA tRNA-Phe-AAA-1-2 Sc: 49.1 >>>>>>>..>>>>..........<<<<.>>>>>..........................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGGTCTTAGCTCACTT.GGGA.GAGCGCCAGACTGAAGttcacttcggttcaaagcaagcattctgtgcggt.................................ATCTGGAG...........GtACTGTGTTCGATCCACAGAGACCGCA tRNA-Phe-GAA-1-2 Sc: 59.2 GCGGTCTTAGCTCACTT.GGGA.GAGCGCCAGACTGAAGttcacttcggttcaaagcaagcattctgtgcggt.................................ATCTGGAG...........GtACTGTGTTCGATCCACAGAGACCGCA tRNA-Phe-GAA-1-4 Sc: 59.2 GCGGTCTTAGCTCACTT.GGGA.GAGCGCCAGACTGAAGtcaaacttcggttcaaaacaagcattactctgtgcggt.............................ATCTGGAG...........GtACTGTGTTCGATCCACAGAGACCGCA tRNA-Phe-GAA-1-1 Sc: 59.1 GCGGTCTTAGCTCACTT.GGGA.GAGCGCCAGACTGAAGtccaacttcggtttaagcaagcattactctgtgcggt..............................ATCTGGAG...........GtACTGTGTTCGATCCACAGAGACCGCA tRNA-Phe-GAA-1-3 Sc: 59.1 >>>>>>>..>>>>..........<<<<.>>>>............................................................................<<<<................>>>>>.......<<<<<<<<<<<<. GCTCGAGAAGCTCAACCtGGTA.GAGCGGAACTCTGAAG...................................................................ATGTTTAG...........GcTGTAAGTTCAAATCTTACTTCGAGCA tRNA-Phe-GAA-2-1 Sc: 52.7
Pro tRNAs
>>>>>>>..>>>..........<<<.>>>>>................................................<<<<<................>>>.>.......<.<<<<<<<<<<. GGTCGAATGGTCTAGTGGTA.TGATTCTCGCTTAGGGaacacctaagttgaat.........................TGCGAGAG...........GtCCCGAGTTCGATCCCCGGTTCGACCC tRNA-Pro-AGG-1-1 Sc: 59.2 GGTCGAATGGTCTAGTGGTA.TGATTCTCGCTTAGGGaacacctaagttgaat.........................TGCGAGAG...........GtCCCGAGTTCGATCCCCGGTTCGACCC tRNA-Pro-AGG-1-4 Sc: 59.2 GGTCGAATGGTCTAGTGGTA.TGATTCTCGCTTAGGGaaacacctaagttgaat........................TGCGAGAG...........GtCCCGAGTTCGATCCCCGGTTCGACCC tRNA-Pro-AGG-1-2 Sc: 59.1 GGTCGAATGGTCTAGTGGTA.TGATTCTCGCTTAGGGaaacacctaagttgaat........................TGCGAGAG...........GtCCCGAGTTCGATCCCCGGTTCGACCC tRNA-Pro-AGG-1-3 Sc: 59.1 >>>>>>>..>>>..........<<<.>>>>>................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCCAATGGTCTAGTGGTA.TGATTGTCGCTTCGGGattccctcccttctgattcttcacaagatcggaaatgaat.TGTGACAG...........GcCCCGGGTTCAAATCCCGGTTGGACCC tRNA-Pro-CGG-1-2 Sc: 56.4 GGTCCAATGGTCTAGTGGTA.TGATTGTCGCTTCGGGatttcctcccttctgatccttcaataagattagaaatgaatTGTGACAG...........GcCCCGGGTTCAAATCCCGGTTGGACCC tRNA-Pro-CGG-1-1 Sc: 56.3 >>>>>>>..>>>..........<<<.>>>>>................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCAATGGTCTAGTGGTA.TGATTCCTGCTTTGGGttattcgttattcaatc........................TGCAGGAG...........GcCCCGGGTTCAAATCCCGGTTGAACCC tRNA-Pro-TGG-1-1 Sc: 65.5
SeC tRNAs
Ser tRNAs
>>>>>>>......>>>...........<<<.>>>>>.....................................................................................................<<<<<..>>>>.........<<<<..>>>>>.......<<<<<.<<<<<<<. GGCGTGGT....AGCAAAGTGGTtA.CTGCGATTGACTAGAActcgttcagatcattctgacagcaccttgact..............................................................ATCAATT.CCCTTC.......GGGGGCGCAGGTTCGAATCCTGC.CCACGTCG tRNA-Ser-AGA-1-1 Sc: 64.4 GGCGTGGT....AGCAAAGTGGTtA.CTGCGACAGACTAGAAcagtttcagatcctgaaatctgagtacaacttgact..........................................................ATCTGTT.CTCTTC.......GGAGGCGCAGGTTCGAATCCTGC.CCACGTCG tRNA-Ser-AGA-2-1 Sc: 63.6 >>>>>>>......>>>...........<<<..>.>>.....................................................................................................<<.<......................>>>>>.......<<<<<.<<<<<<<. GGCGCGGT....AGCAAAGTGGTtA.CTGCGATTGACTAGAAtcgatactgtgctaaagtatctcagtattggatatcaattcccttcggggtaagtgaccctttcaatcttgcgaaacgattacatactaacaacCTCTAAGG.................GCGCAGGTTCGAATCCTGC.CCGCGTCG tRNA-Ser-AGA-3-1 Sc: 53.3 >>>>>>>......>>>...........<<<.>>>>>.....................................................................................................<<<<<..>>>>.........<<<<..>>>>>.......<<<<<.<<<<<<<. GGCGGAGT....AGCAAAGTGGTtA.CTGCGATTGACTCGAAgtggtttagtgtgtagaatctaaccacagca...............................................................ATCAATT.GCCTTC.......GGGCGCGCAGGTTCGAATCCTGC.CTCCGTCG tRNA-Ser-CGA-1-1 Sc: 62.6 GGCGGAGT....AGCAAAGTGGTtA.CTGCGATTGACTCGAAgtggtttagtttagtgtaccaattacgaaccatagca.........................................................ATCAATT.GCCTTC.......GGGCGCGCAGGTTCGAATCCTGC.CTCCGTCG tRNA-Ser-CGA-1-2 Sc: 62.3 >>>>>>>......>>>...........<<<.>>>>>.....................................................................................................<<<<<..>>>>.........<<<<..>>>>>.......<<<<<.<<<<<<<. GCTGTGGT....GGCGGAGTGGTtA.ACGCGCCAGACTTGAAtcacgtgattgctgctattgctgcggtccgtacatcatgtttcagtc...............................................ATCTGGT.ACCTTC.......GGGTGCGCAAGTTCGAATCTTGT.CCGCAGCG tRNA-Ser-TGA-1-1 Sc: 65.6 GCTGTGGT....GGCGGAGTGGTtA.ACGCGCCAGACTTGAAtcacgtgatagcagctattgttgtcacccgtacaatatgtttcagtc...............................................ATCTGGT.ACCTTC.......GGGTGCGCAAGTTCGAATCTTGT.CCGCAGCG tRNA-Ser-TGA-1-2 Sc: 65.6 >>>>>>>......>>>...........<<<.>>>.>.....................................................................................................<.<<<.....................>>>>>.......<<<<<.<<<<<<<. GGCACTTT....GGCGGAGTGGTtA.ACGCGCTGCCCTGCTAtgttgcaggttaaggcagtgcctgtacgttgccccatcttctccaagttattggttcgttaactgacttcctctt...................AGTCGGGC.................GCGTGAGTTCGAATCTCAC.AGGTGTCG tRNA-Ser-GCT-2-1 Sc: 49.1 .>>>.>>......>>>...........<<<.>>>>>.....................................................................................................<<<<<..>>>>.........<<<<..>>>>>.......<<<<<.<<.<<<.. AACAATTTctcaGGCGGAGTGGTtA.ACGCGCTGCCCTGCTActactgcagccac.................................................................................AGGCAGT.GCCTTC.......GGGCGCGTGAGTTCGAATCTCAC.AGGTGTCG tRNA-Ser-GCT-1-1 Sc: 38.9
Sup tRNAs
>>>>>.>..>>>..........<<<.>>>>>...........................................................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGCATATGGTCTAGTGGTA.TGATGCACCCTGTTAGtatcaccgaaaattcctacattccttactagtggctaacaatctccacagtagcactatatctaagtcTGGGTGAG...........GtCCCCGGTTCAATTCCGGGTTTGTCCA tRNA-Sup-TTA-1-1 Sc: 48.7
Thr tRNAs
>>>>>>>....>>>>.........<<<<.>>>>>..........................<<<<<.......................>>>>>...................................<<<<.....<<<<<<<<. GCCGCTATA..GCTCAGTTGGTA.GAGCGCGGCACTAGTAcctctactagatc......ATGCCGAG..................GtCTTCGGT.........TCAAA...................TCCGA.....ATGGTGGCA tRNA-Thr-AGT-1-1 Sc: 73.2 GCCGCTATA..GCTCAGTTGGTA.GAGCGCGGCACTAGTActtctactagatc......ATGCCGAG..................GtCTACGGT.........TCAAA...................TCCGT.....ATGGTGGCA tRNA-Thr-AGT-2-1 Sc: 70.7 >..>>.>....>>>>.........<<<<.>>>>>..........................<<<<<.......................>>>>>...................................<<<<.....<<.<<..<. GCCGCTATA..GCTCAGTTGGTA.GAGCGCGGCACTAGTActtctactacgtt......ATGCCGAG..................GtCTACGGT.........TCGAAgtatgtatcgccctgaaat.CCGTctctcATTGCAACA tRNA-Thr-AGT-4-1 Sc: 36.1 >>>.>>.....>>>>.........<<<<.>>>>>..........................<<<<<..>..>..........<..<...>>.>>...................................<<.<.....<.<<.<<<. TCGCCGCTAtaGCTCAGTTGGTA.GAGCGCGGCACTAGTAttcctgctaggtc......ATGCCGAGGTCTACG.......GTTCGaCGTAAGTcacactgctTCAAA...................TCTCA.....CATGCTGAG tRNA-Thr-AGT-3-1 Sc: 27.6 >>>>>>>....>>>...........<<<.>>>>>..........................<<<<<.......................>>>>>...................................<<<<.....<<<<<<<<. GCCTCTGTG..GCTTAGT.GGTA.CAGCGTCTCACTCGTAagacgttcatgcgtgcac.ATGAGAAG..................AtCCCCGGT.........TCGAT...................TCCGG.....GTGGAGGCA tRNA-Thr-CGT-1-1 Sc: 66.0 GCCTCTGTG..GCTTAGT.GGTA.CAGCGTCTCACTCGTActttgaatcaatggtgcacATGAGAAG..................AtCCCCGGT.........TCGAT...................TCCGG.....GTGGAGGCA tRNA-Thr-CGT-1-2 Sc: 65.9 >>>>>>>....>>>...........<<<.>>>>>..........................<<<<<.......................>>>>>...................................<<<<.....<<<<<<<<. GCCTCCATA..GCACAGT.GGTA.CTGCGTCGCACTTGTAtggccaatactgga.....ATGCGAAG..................AtCACTCGT.........TCGAT...................TCGGG.....TTGGAGGCA tRNA-Thr-TGT-1-1 Sc: 60.8 GCCTCCATA..GCACAGT.GGTA.CTGCGTCGCACTTGTAtggccaatactgaa.....ATGCGAAG..................AtCACTCGT.........TCGAT...................TCGGG.....TTGGAGGCA tRNA-Thr-TGT-1-2 Sc: 60.8
Trp tRNAs
Tyr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.............................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. CTCTCCTTAGCTCAGTTGGAAGAGCGTGAGACTGTAAcggagtcacacaaccgaccagaacgatatcacgattccaaagttcaccgacgacgggattcggtgagattcgctcacacatggtcgATCTCAAG...........GtCCCTGGTTCGAACCCGGGAGGGGAGA tRNA-Tyr-GTA-1-1 Sc: 72.8 CTCTCCTTAGCTCAGTTGGAAGAGCGTGAGACTGTAAcagagtcacacaaccgaccagaccggtgttatcgttccaacgccacaagcattggcaatcgataatattcgctcgaaaatggtcg.ATCTCAAG...........GtCCCTGGTTCGAACCCGGGAGGGGAGA tRNA-Tyr-GTA-1-2 Sc: 72.8 CTCTCCTTAGCTCAGCTGGAAGAGCGCAAGACTGTAAaatctcacacctcgacctgacaattcctcactatctgccccaacgggtcccagatatcgggagttgttcacgaatggtcg......ATCTTGAG...........GcCCGCGGTTCGATCCCGCGAGGGGAGA tRNA-Tyr-GTA-2-1 Sc: 67.4
Val tRNAs
>>>>.>>..>>>............<<<.....>>>>>............................................................................<<<<<................>>>>>.......<<<<<<<.<<<<. GGCCGCGTGGTGTAGCTGGTtA.TCACG....TGAGTCTAACAgttcaatctgctagat.....................................................CACTCAAG...........GtCCCCGGTTCGAGCCCGGGCGAGGTCA tRNA-Val-AAC-1-2 Sc: 64.6 GGCCGCGTGGTGTAGCTGGTtA.TCACG....TGAGTCTAACAgttcaagctgctagat.....................................................CACTCAAG...........GtCCCCGGTTCGAGCCCGGGCGAGGTCA tRNA-Val-AAC-1-4 Sc: 64.6 GGCCGCGTGGTGTAGCTGGTtA.TCACG....TGAGTCTAACAgttcttcactgttcagat...................................................CACTCAAG...........GtCCCCGGTTCGAGCCCGGGCGAGGTCA tRNA-Val-AAC-1-1 Sc: 64.5 GGCCGCGTGGTGTAGCTGGTtA.TCACG....TGAGTCTAACAgtgcttcactgttcagat...................................................CACTCAAG...........GtCCCCGGTTCGAGCCCGGGCGAGGTCA tRNA-Val-AAC-1-3 Sc: 64.5 >>>>>>>..>>>............<<<.....>>>>>............................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTTTCCATGGTCTAGT.GGT.A.TGACG....TTCGCTTCACAgagcttctgtggtacac....................................................CGCGAAAG...........GtCCCGGGTTCGAGCCCCGGTGGGAATA tRNA-Val-CAC-1-1 Sc: 71.3 GTTTCCATGGTCTAGT.GGT.A.TGACG....TTCGCTTCACAcagagtctctgttactc....................................................CGCGAAAG...........GtCCCGGGTTCGAGCCCCGGTGGGAATA tRNA-Val-CAC-1-2 Sc: 71.3 >>>>>>>..>>>............<<<......>>.>............................................................................<.<<.................>>>>>.......<<<<<<<<<<<<. GGTCCAATGGTCTAGT.GGT.A.TGATTgtaaGTTATTTCTGActgctccacatggcctcacgtcgatactaacattcaaatagcttgctttgggttgtacaacatctaaatTGCAAGAG...........GcCCCGCGTTCGAATCGCGGTTGGACCC tRNA-Val-CAC-2-1 Sc: 34.2 >>>>>>>..>>>............<<<.....>>>>>............................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGACTTGTGGTGTAGT.GGTtA.TCACG....TCTCGTTTACAatcaagtagacacagccgtcgcacacttgtgcgttgggcgct...........................CCGAGAAG...........GcCGCAGGTTCGAGCCCTGCCAAGTTCA tRNA-Val-TAC-1-1 Sc: 67.9 GGACTTGTGGTGTAGT.GGTtA.TCACG....TCTCGTTTACAgccaagtaaacactgctgatgtactttcgtgcatcgggagct...........................CCGAGAAG...........GcCGCAGGTTCGAGCCCTGCCAAGTTCA tRNA-Val-TAC-1-2 Sc: 67.8 >>>>>>>..>>>>..........<<<<......>>>>............................................................................<<<<.................>>>>>.......<<<<<<<<<<<<. AAGGAATTAGCTCAATTGGT.G.GAGCA....ACCGTTTTACA.....................................................................CACGGAAG...........GcTAGGTGTTCAAATCACCTATTCCTTA tRNA-Val-TAC-2-1 Sc: 40.9