tRNA Gene Summary

Overview
High confidence set 417
tRNAs decoding standard 20 AA 415
Selenocysteine tRNAs (TCA) 2
Notable atypical predictions  
Anticodon/isotype mismatch 2
Unexpected anticodons 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 85
Secondary filter (low feature scores, possible rep. element) 91

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 28)
Arg TCT
5
Leu CAA
5
Ile TAT
5
Tyr GTA
13
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
22
GGC
 
CGC
4
TGC
8
34
GlyACC
 
GCC
14
CCC
5
TCC
9
28
ProAGG
9
GGG
 
CGG
4
TGG
7
20
ThrAGT
9
GGT
 
CGT
5
TGT
6
20
ValAAC
9
GAC
 
CAC
11
TAC
5
25
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
 
CGA
4
TGA
4
ACT
 
GCT
8
 
 
 
 
25
ArgACG
7
GCG
 
CCG
4
TCG
6
 
 
 
 
CCT
5
TCT
6
28
LeuAAG
9
GAG
 
CAG
9
TAG
3
 
 
 
 
CAA
6
TAA
4
31
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
10
 
 
 
 
10
AsnATT
 
GTT
20
 
 
 
 
20
Lys 
 
 
 
CTT
15
TTT
12
27
AspATC
 
GTC
13
 
 
 
 
13
Glu 
 
 
 
CTC
8
TTC
7
15
HisATG
 
GTG
10
 
 
 
 
10
Gln 
 
 
 
CTG
13
TTG
6
19
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
14
GAT
3
CAT
 
TAT
5
22
iMet/Met 
 
 
 
CAT
9/10
 
 
19
TyrATA
 
GTA
13
 
 
 
 
13
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
29
 
 
 
 
29
Trp 
 
 
 
CCA
7
 
 
7
SelCys 
 
 
 
 
 
TCA
2
2