tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 197
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 1
Predicted pseudogenes 8
Total tRNAs 206
Intron Summary (tRNAs with introns: 106)
Ala AGC
6
Ala TGC
1
Gly TCC
2
Pro AGG
4
Pro CGG
3
Pro TGG
2
Thr AGT
5
Thr TGT
1
Val CAC
2
Ser CGA
3
Ser TGA
2
Ser GCT
4
Arg ACG
6
Arg CCG
2
Arg TCG
2
Arg CCT
2
Arg TCT
2
Leu AAG
2
Leu CAG
2
Leu TAG
1
Leu CAA
2
Leu TAA
1
Asn GTT
4
Lys CTT
8
Lys TTT
2
Asp GTC
4
Glu CTC
1
His GTG
4
Gln CTG
5
Gln TTG
4
Ile TAT
2
iMet CAT
4
Met CAT
3
Tyr GTA
4
Trp CCA
4
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 53840

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
6
GGC
 
CGC
5
TGC
2
13
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
10
CCC
3
TCC
5
18
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
4
GGG
 
CGG
3
TGG
2
9
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
5
GGT
 
CGT
5
TGT
2
12
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
5
GAC
 
CAC
3
TAC
5
13
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
4
GGA
 
CGA
3
TGA
2
ACT
 
GCT
4
 
 
 
 
13
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
6
GCG
 
CCG
2
TCG
2
 
 
 
 
CCT
2
TCT
4
16
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
5
GAG
 
CAG
3
TAG
1
 
 
 
 
CAA
2
TAA
2
13
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
4
 
 
 
 
4
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
5
 
 
 
 
5
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
8
TTT
3
11
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
6
 
 
 
 
6
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
11
TTC
3
14
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
4
 
 
 
 
4
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
5
TTG
4
9
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
7
GAT
1
 
 
TAT
2
10
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
4/4
 
 
8
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
4
 
 
 
 
4
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
2
GCA
16
 
 
 
 
18
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
4
 
 
4
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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