tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 114
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 8
Total tRNAs 122
Intron Summary (tRNAs with introns: 30)
Pro TGG
3
Val CAC
1
Ser CGA
1
Ser TGA
3
Ser GCT
2
Arg CCT
1
Leu AAG
2
Leu CAG
1
Leu CAA
3
Leu TAA
3
Glu TTC
1
Gln TTG
2
Ile TAT
1
Met CAT
2
Tyr GTA
3
Cys GCA
1

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 1573

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
4
GGC
 
CGC
 
TGC
3
7
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
5
CCC
 
TCC
3
8
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
1
GGG
 
CGG
 
TGG
4
5
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
3
GGT
 
CGT
2
TGT
3
8
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
4
GAC
 
CAC
1
TAC
1
6
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
2
GGA
 
CGA
1
TGA
4
ACT
 
GCT
2
 
 
 
 
9
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
2
GCG
 
CCG
1
TCG
 
 
 
 
 
CCT
1
TCT
5
9
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
2
GAG
 
CAG
1
TAG
1
 
 
 
 
CAA
3
TAA
4
11
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
5
 
 
 
 
5
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
4
 
 
 
 
4
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
5
TTT
3
8
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
6
 
 
 
 
6
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
2
TTC
5
7
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
3
 
 
 
 
3
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
1
TTG
4
5
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
6
GAT
1
 
 
TAT
1
8
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
2/4
 
 
6
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
3
 
 
 
 
3
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
1
 
 
 
 
1
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
2
 
 
2
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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