Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>.>..>>>...........<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGCATATGGTTTAGTGGTA.T.AATACTCCCTTAGCAtacagcttagcctgtcaaatggt.........TGGGAGTG...........GtCCTGGGTTCGATTCCCAGTTTGTCCA tRNA-Ala-AGC-1-1 Sc: 63.3 GGGCATATGGTTTAGTGGTA.T.AATACTCCCTTAGCAtgcagcaagcctcgttcagag...........TGGGAGTG...........GtCCTGGGTTCGATTCCCAGTTTGTCCA tRNA-Ala-AGC-1-2 Sc: 63.3 GGGCATATGGTTTAGTGGTA.T.AATACTCCCTTAGCAtgcggctcagccgatcacgtgac.........TGGGAGTG...........GtCCTGGGTTCGATTCCCAGTTTGTCCA tRNA-Ala-AGC-1-4 Sc: 63.3 GGGCATATGGTTTAGTGGTA.T.AATACTCCCTTAGCAtgcagcgtcgcctggcaacgtcatacg.....TGGGAGTG...........GtCCTGGGTTCGATTCCCAGTTTGTCCA tRNA-Ala-AGC-1-3 Sc: 63.1 GGGCATATGGTTTAGTGGTA.T.AATACTCCCTTAGCAtgcggcggcgccgggcagcgtacggcacgaagTGGGAGTG...........GtCCTGGGTTCGATTCCCAGTTTGTCCA tRNA-Ala-AGC-1-5 Sc: 62.9 >>>>>>>..>>>...........<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGCTTGGTCTAGGGGTA.T.GATTTTCGTTTCGCAcaatgcttccaagcagcatgggta........TATGAAAG...........GtCATGGGTTCAATTCCCATAGCGTCCA tRNA-Ala-CGC-1-1 Sc: 55.2 GGGGACATGGTCTAGGGGTA.T.GATTTTCCTTTCGCAcgctgcatcggtagcagagaa...........TAGGAAAG...........GtCAGGGGTTCAATTCCCCTTGTCTCCA tRNA-Ala-CGC-2-1 Sc: 54.8 >>>>>>>..>>>>........<.<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGGTTAGATCAGTGGTA.GtATCGCTCGCTTTGCA................................TGCGAGAG...........GtCGTGGGTTCAATCCCCACACCGTCCA tRNA-Ala-TGC-1-1 Sc: 69.3 GGGCGGTTAGATCAGTGGTA.GtATCGCTCGCTTTGCA................................TGCGAGAG...........GtCGTGGGTTCAATCCCCACACCGTCCA tRNA-Ala-TGC-1-2 Sc: 69.3
Arg tRNAs
>>>>>>>..>>>...........<<<.>>>>>..........................................................................<<<<<................>>>>>..................<<<<<<<<<<<<. GGCCTGCTGGCCCAATGGC.A.AGGCGCTTGACTACGAttaatgtcccattagttgc................................................ATCAAGAG...........AtTGCAGGTTCGAT...........CCCTGCGTAGGTCA tRNA-Arg-ACG-1-1 Sc: 66.7 GGCCTGCTGGCCCAATGGC.A.AGGCGCTTGACTACGAttcggcatagcttagtcta................................................ATCAAGAG...........AtTGCAGGTTCGAT...........CCCTGCGTAGGTCA tRNA-Arg-ACG-1-3 Sc: 66.7 GGCCTGCTGGCCCAATGGC.A.AGGCGCTTGACTACGAatcagctgaggcagctcatttca............................................ATCAAGAG...........AtTGCAGGTTCGAT...........CCCTGCGTAGGTCA tRNA-Arg-ACG-1-2 Sc: 66.5 GGCCTGCTGGCCCAATGGC.A.AGGCGCTTGACTACGAcccgggctgcggtccggtcggt.............................................ATCAAGAG...........AtTGCAGGTTCGAT...........CCTTGCGTAGGTCA tRNA-Arg-ACG-2-1 Sc: 59.3 >>>>>>>..>>>>.........<<<<.>>>>>..........................................................................<<<<<................>>>>>..................<<<<<<<<<<<<. GGCCTGGTGGCCTAATGGT.A.AGGCGTTGGTTTCCGGctcgctgtgaaca......................................................TACCAAAG...........AcTTCGGGTTCGAG...........TCCCGACTGGGTCG tRNA-Arg-CCG-1-1 Sc: 57.6 >>>>>>>..>>>...........<<<.>>>>>..........................................................................<<<<<................>>>>>..................<<<<<<<<<<<<. GGACCGTTGGCCCAATGGC.A.AGGCGTTTGACTTCGAttgtttcatcccttaacttcccta...........................................ATCAAAAG...........AtTGCAGGTTCGAT...........CCCTGCACGGTCCT tRNA-Arg-TCG-2-1 Sc: 65.6 GGACCGTTGGCCCAATGGC.A.AGGCGTTTGACTTCGAttgtttaaccccataacttctcac...........................................ATCAAAAG...........AtTGCAGGTTCGAC...........CCCTGCACGGTCCT tRNA-Arg-TCG-1-1 Sc: 62.8 >.>>.>>..>>>>.........<<<<.>>>>>..........................................................................<<<<<................>>>>>..................<<<<<<<.<<.<. GGCTACCTAGTGCAGTGATtA.GCGCGTCTGCCTTCGGtttgaaga...........................................................TGCAGGAA...........A.CGCGGGTTCGAA...........TCCTGCGGAAGGCA tRNA-Arg-TCG-3-1 Sc: 39.1 >>>>.....>>>>.........<<<<.>>>>>..........................................................................<<<<<.................>>.>..................<.<<....<<<<. TGTT...TGGCGCAATGGT.A.GCGCGTAGACCTCCTA...................................................................AGTCTAAG...........GcTGTGGGTTCGAGgtacggtttag.CACAAT..GACAG tRNA-Arg-CCT-1-1 Sc: 29.5 >>>>>>>..>>>>.........<<<<.>>>>>..........................................................................<<<<<................>>>>>..................<<<<<<<<<<<<. GGTCTGCTGGCGCAATGGT.A.GCGCGCAAGACTTCTAcactgcacccgttatgcgttgacaccacccatgaggagacgtccgttcaggagagcagttagatggtATCTTGAG...........GcTGTGGGTTCGAG...........TCCCACGTAGATCA tRNA-Arg-TCT-2-1 Sc: 73.6 GCTCCGCTGGCGCAATGGT.A.GCGCGCAAGACTTCTAtcctgaggtcctggtatcgtcgcggtgagatgagatcacggtgtccgcgatacagatgtt.......ATCTTGAG...........GtTGTGGGTTCGAG...........TCCCACGCGGAGTG tRNA-Arg-TCT-1-1 Sc: 72.6
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCTCGTGGCGCAATTGGCtAGCGCGTTCGACTGTTAggactatatccgaa..................ATCGAGAG...........GtTGGTGGTTCGAGCCCACCCGAGGGAG tRNA-Asn-GTT-1-4 Sc: 69.6 TCCCTCGTGGCGCAATTGGCtAGCGCGTTCGACTGTTAgtctctagcaatatgtctgca...........ATCGAGAG...........GtTGGTGGTTCGAGCCCACCCGAGGGAG tRNA-Asn-GTT-1-2 Sc: 69.4 TCCCTCGTGGCGCAATTGGCtAGCGCGTTCGACTGTTAaagtctccagcaacgcagtctgca........ATCGAGAG...........GtTGGTGGTTCGAGCCCACCCGAGGGAG tRNA-Asn-GTT-1-1 Sc: 69.2 TCCCTCGTGGCGCAATTGGCtAGCGCGTTCGACTGTTAgtctctagagtaccggccggtgcatgtctgcgATCGAGAG...........GtTGGTGGTTCGAGCCCACCCGAGGGAG tRNA-Asn-GTT-1-3 Sc: 68.9
Asp tRNAs
>>>>>>>..>>>...........<<<.>>>>>...................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAgccgacaatg..CGCGGGAG...........ATCGGGGTTCGACTCCCCGTCAGAGAG tRNA-Asp-GTC-1-2 Sc: 52.3 TCTTTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAtagacaagt...CGCGGGAG...........ATCGGGGTTCGACTCCCCGTCAGAGAG tRNA-Asp-GTC-1-4 Sc: 52.3 TCTTTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAaatcgacaagg.CGCGGGAG...........ATCGGGGTTCGACTCCCCGTCAGAGAG tRNA-Asp-GTC-1-1 Sc: 52.2 TCTTTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAccatgtgcaagtCGCGGGAG...........ATCGGGGTTCGACTCCCCGTCAGAGAG tRNA-Asp-GTC-1-3 Sc: 52.2 TCTTTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAttcagacaagttCGCGGGAG...........ATCGGGGTTCGACTCCCCGTCAGAGAG tRNA-Asp-GTC-1-5 Sc: 52.2
Cys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCTTTAGCTCAGTGGTA.GAGCGGGCGATTGCAGtaatgtcaattc........ATCGCCAG...........GtCGATTGTTCGAACCAGTCAGGGAGCT tRNA-Cys-GCA-1-1 Sc: 63.2 GCTCCTTTAGCTCAGTGGTA.GAGCGGGCGATTGCAGctgcacacagcaagcaactcATCGCCAG...........GtCGATTGTTCGATCCAGTCAGGGAGCT tRNA-Cys-GCA-2-1 Sc: 62.8 GCTGTGATAGCTCAGCGGTA.GAGCGGAGGATTGCAG....................CTCCTCAG...........GtCATCCGTTCAATCCGGGTTCGCAGCT tRNA-Cys-GCA-3-1 Sc: 62.0
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......................................<<<<<................>>.>>.......<<.<<.<<<<<<<. GGTTGCTTGGTGTAATGGTtA.GCACATCAGATTCTGAtcgcttcgccgcgttagaaa............TTCTGGGG...........A.TATTGGTTCGATTCCTAT.AGCGACCT tRNA-Gln-CTG-1-2 Sc: 50.7 GGTTGCTTGGTGTAATGGTtA.GCACATCAGATTCTGAtcagcctcgcggcgtccgaaa...........TTCTGGGG...........A.TATTGGTTCGATTCCTAT.AGCGACCT tRNA-Gln-CTG-1-1 Sc: 50.6 >>>>>>>..>>>>.........<<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGTTGTATAGTGTAGCGGTtA.GCACGTGGGATTTTGActtcatatcagaatcatgttctgcaaagaactTTCCCGA............GtCCTGGGTTCGAGCCCCAG.TACGACCT tRNA-Gln-TTG-1-1 Sc: 64.4 GGTTGTGTGGTGTAACGGTtA.GCACATGAGATTTTGAcacatcagaatcatggctctgatcttcagaccTTCTCGGG...........A.CCAGGGTTCGACTCCCTG.CACGACCT tRNA-Gln-TTG-2-1 Sc: 54.4
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...............................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGGAATGGTGTAGTGGCtA.GCATTTCTGCCTCTCAtgacaattgtcaccgtgat.....CGCAGGAG...........ACCGGGGTTCAATTCCCCGTTCCGGAA tRNA-Glu-CTC-1-4 Sc: 61.1 TCCGGAATGGTGTAGTGGCtA.GCATTTCTGCCTCTCAactggctcgtccacagggta....CGCAGGAG...........ACCGGGGTTCAATTCCCCGTTCCGGAA tRNA-Glu-CTC-1-5 Sc: 61.1 TCCGGAATGGTGTAGTGGCtA.GCATTTCTGCCTCTCAatgatccaagtgatcggcgtgaa.CGCAGGAG...........ACCGGGGTTCAATTCCCCGTTCCGGAA tRNA-Glu-CTC-1-2 Sc: 61.0 TCCGGAATGGTGTAGTGGCtA.GCATTTCTGCCTCTCAacgatcgtagcgaccgatgtgaa.CGCAGGAG...........ACCGGGGTTCAATTCCCCGTTCCGGAA tRNA-Glu-CTC-1-3 Sc: 61.0 TCCGGAATGGTGTAGTGGCtA.GCATTTCTGCCTCTCAacagattgtctcatcgatcgagtgCGCAGGAG...........ACCGGGGTTCAATTCCCCGTTCCGGAA tRNA-Glu-CTC-1-1 Sc: 60.9 >>>>>>>..>>>>.........<<<<.>>>>>...............................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGCTATGGTGTAACGGTcA.GCATATTGCCTTTTCAatctgatatcagtcgaaatt....CGGCGGAG...........ACCGGGGTTCGATTCCCCGTAGCGGAG tRNA-Glu-TTC-1-1 Sc: 53.2
Gly tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>..........................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTCTGTGGTTTAGTGGT..A.AAATCCATCGTTGCCAgttctgagcgatcagaaagcagct...........TCGATGGG...........CCCCGGGTTCGATTCCCGGCGGACGCA tRNA-Gly-GCC-2-2 Sc: 55.5 GCGTCTGTGGTTTAGTGGT..A.AAATCCATCGTTGCCAactctgagcgatcagaaggtgcagct.........TCGATGGG...........CCCCGGGTTCGATTCCCGGCGGACGCA tRNA-Gly-GCC-2-3 Sc: 55.4 GCGTTTGTGGTTTAGTGGT..A.AAATCCATCGTTGCCAtctctgagcgatcagagagcagct...........TCGATGGG...........CCCCGGGTTCGATTCCCGGCGAACGCA tRNA-Gly-GCC-1-1 Sc: 55.2 GCGTCTGTGGTTTAGTGGT..A.AAATCCATCGTTGCCAatctcgtctctgggcgttcagggaggaaagctgccTCGATGGG...........CCCCGGGTTCGATTCCCGGCGGACGCA tRNA-Gly-GCC-2-1 Sc: 55.1 GCGTCTGTGGTTTAGTGGT..A.AAATCCATCGTTGCCAagtgtcatttacctgacagtcagcac.........TCGATGGG...........CCCCGGGTCCGATTCCCGGCGGACGCA tRNA-Gly-GCC-3-1 Sc: 47.4 GCGTCTGTGGTTTAGTGGT..A.AAATCCATCGTTGCCAtgtgtctctcaccggacaatcagtac.........TCGATGGG...........CCCCGGGTCCGATTCCCGGCGGACGCA tRNA-Gly-GCC-3-2 Sc: 47.4 GCGTCTGTGGTTTAGTGGT..A.AAATCCATCGTTGCCActgtgagtacctatactcatggtcagtt.......TCGATGGG...........CCCCGGGTCCGATTCCCGGCGGACGCA tRNA-Gly-GCC-3-3 Sc: 47.3 >>>>>>>..>>>>..........<<<<.>>>>>..........................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GTCTCGGTAGAGCAGTGGTttA.GCTTGTCTGCTTCCCAtgatccatgtgagat....................AGCAGGAG...........ACACGGGTTCGAATCCCGTCCGGGACA tRNA-Gly-CCC-2-1 Sc: 65.1 GCACTTATGGTTTAGTGGT..A.AAATCAACGCTTCCCAccatcactccgtgacagtg................TGCGTTGG...........CCCCGGGTTCGATTCCCGGTGAGTGCA tRNA-Gly-CCC-1-1 Sc: 57.1 >>..>>>..>>>>..........<<<<.>>>>>..........................................<<<<<...............>>>>>.......<<<<<<<<..<<. GCTTCCGTGGTCCAATGGTt.A.GGATTCCACCCTTCCAgtgcattcagtgcatgagcg...............AGGTGGAG...........GTTCGTGTTCGATTCACGGCGGTTGCA tRNA-Gly-TCC-1-1 Sc: 46.8 GCTTCCGTGGTCCAATGGTt.A.GGATTCCACCCTTCCAcagcatgcaatgctcgagta...............AGGTGGAG...........GTTCGTGTTCGATTCACGGCGGTTGCA tRNA-Gly-TCC-1-2 Sc: 46.8 GCTTCCGTGGTCCAATGGTt.A.GGATTCCACCCTTCCAgagcccctgtggttcgagca...............AGGTGGAG...........GTTCGTGTTCGATTCACGGCGGTTGCA tRNA-Gly-TCC-1-3 Sc: 46.8 GCTTCCGTGGTCCAATGGTt.A.GGATTCCACCCTTCCAtgtcatctcggtgataagca...............AGGTGGAG...........GTTCGTGTTCGATTCACGGCGGTTGCA tRNA-Gly-TCC-1-4 Sc: 46.8
His tRNAs
>>>>>>>..>>>>........<<<<..>>>>.....................................<<<<................>>>>>.......<<<<<<<<<<<<. GGTGGTGTGGTGTAATGGTA.GCACGTGACGTTGTGGctctctgtcaagagttccatgctgac....CCGTTTCA...........ATCTGGGTTCGATTCCCAGCACCGCCA tRNA-His-GTG-1-1 Sc: 43.2 GGTGGTGTGGTGTAATGGTA.GCACGTGACGTTGTGGttgttcttccccggagacatctacactgacCCGTTTCA...........ATCTGGGTTCGATTCCCAGCACCGCCA tRNA-His-GTG-1-2 Sc: 42.9
Ile tRNAs
>>>>>>>..>>>>..........<.<<<.>>>>>.................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GATCGCTTAGCTCAGTTGGTtA.G.AGCGTGGTGCTAATA..........................................................................ACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGATCA tRNA-Ile-AAT-1-2 Sc: 76.0 GATCGCTTAGCTCAGTTGGTtA.G.AGCGTGGTGCTAATA..........................................................................ACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGATCA tRNA-Ile-AAT-1-3 Sc: 76.0 GATCGCTTAGCTCAGTTGGTtA.G.AGCGTGGTGCTAATAcccatccgacaagatggatagttc..................................................ACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGATCA tRNA-Ile-AAT-1-1 Sc: 68.2 GATCGCTTAGCTCAGTTGGTtA.G.AGCGTGGTGCTAATAtcactcttactcttctcctgcgacaaaaagggaggggtgaggcgtgca..........................ACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGATCA tRNA-Ile-AAT-1-4 Sc: 67.3 >>>>>>>..>>>>..........<.<<<.>>>>>.................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCGATTGGTTCAAA.GGT.A.GtAACGCACCCGCTATAttcccctctcccattttgagcaagcaattttgggcctccttgaacgcgttgcaggacgtggagagggatgttgtTGGGTGAG...........A.TTTGGGTTCGAGTCCCAAATTGACCA tRNA-Ile-TAT-1-1 Sc: 32.1
Leu tRNAs
>>>>>>>....>>>>..........<<<<.>>>>>..........................................<<<<<..>>>.............<<<..>>>>>.......<<<<<......<<<<<<<. GGACAGA.T.GGCCGAGCTGGTtA.TGGCGCCAGGTTAAGGtttccttagcaacaatc..................TCCTGGT.CACGA.........AAGTGGCGTGGGTTCGAGTCCCAC......TCTGTTCA tRNA-Leu-AAG-1-1 Sc: 58.2 GGACAGA.T.GGCCGAGCTGGTtA.TGGCGCCAGGTTAAGGtttccttaacaacaatt..................TCCTGGT.CACGA.........AAGTGGCGTGGGTTCGAGTCCCAC......TCTGTTCA tRNA-Leu-AAG-1-2 Sc: 58.2 >>>>>>.....>>>>..........<<<<.>>>>>..........................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.......<<<<<<. GAACAG.....GCCGAGCTGGTtA.TGGCGCCAGGTTAAGGtttccttagcaacaatc..................TCCTGGT.CACGA.........AAGTGGCGTGGGTTCGAGTCCCAC......TCTGTTCA tRNA-Leu-AAG-2-1 Sc: 30.9 >>..>.>....>>>>..........<<<<.>>>>>..........................................<<<<<..>>>.>.........<.<<<..>>>>>.......<<<<<......<.<..<<. ACATGTCcTaGGCCGAGCTGGTtA.TGGCGCCAGGTTAAGGttctccttagcaacgatt.................TCCTGGT.CACGT.........AAGTGGCGTGGGTTCGAGTCCCAC.tct..GTTCAGTG tRNA-Leu-AAG-3-1 Sc: 29.6 >>>>>>>....>>>>..........<<<<.>>>>>..........................................<<<<<..>>...............<<..>>>>>.......<<<<<......<<<<<<<. GGTGACG.T.GGCCGAGC.GGTtA.TGGCGCTAGTTTCAGGaactaagaagcggaaaacttctaaatagtgtaataTACTAGT.TCGA...........AAGAGCATGGGTTCGAATCCCAT......CGTCATCA tRNA-Leu-CAG-1-1 Sc: 52.0 >>>>>>>....>>>............<<<.>>>>>..........................................<<<<<..>>...............<<..>>>>>.......<<<<<......<<<<<<<. GGGAAGA.T.GGCCGAGT.GGTtA.AGGCGCTGTGTTTAGGcatgacgctctgagagtgtctggtgac........CCGCAGT.GCGA...........AAGCGCGTGAGTTCGAATCTCAC......TCTTCTCA tRNA-Leu-TAG-1-1 Sc: 54.9 >>>>>>>....>>>>..........<<<<.>>.>>..........................................<<.<<..>>>>...........<<<<..>>>>>.......<<<<<......<<<<<<<. GGACAGG.T.GGCCGAGT.GGTtA.TGGCGTGTGACTCAAGatctgatcttgtcagcttccaaaagttggtgtc..TTCTCAT.GGGC.TCT.......GCCCGCAGGGGTTCGAATCCCCT......CCTGTTCA tRNA-Leu-CAA-1-1 Sc: 67.5 >>>>>>>....>>>............<<<..>.>>..........................................<<.<........................>>>>>.......<<<<<......<<<<<<<. GCCGCTT.T.GGCCGAGT.GGTtA.AGGCGATGGTTTTAAGtttcttcaagctcatatcaccatt...........AACGAAAG.....TT............GCGTGAGTTCGACCCTCAC......AGGCGGCA tRNA-Leu-TAA-1-1 Sc: 56.6
Lys tRNAs
>>>>>>>..>>>>..........<<<<.>>.>>.................................................<<.<<................>>>>>.......<<<<<<<<<<<<. GCCCGGGTAGCTCAATCGGT.A.GAGCGTGTGGCTCTTAtgacaacaaatagatc..........................ACCTCAAG...........GtCGTGGGTTCGAGCCCCACCTCGGGCT tRNA-Lys-CTT-1-1 Sc: 78.1 GCCCGGGTAGCTCAATCGGT.A.GAGCGTGTGGCTCTTAtaacacatatatagatc.........................ACCTCAAG...........GtCGTGGGTTCGAGCCCCACCTCGGGCT tRNA-Lys-CTT-1-2 Sc: 78.0 GCCCGGGTAGCTCAATCGGT.A.GAGCGTGTGGCTCTTAagcagttaaataagtca.........................ACCTCAAG...........GtCGTGGGTTCGAGCCCCACCTCGGGCT tRNA-Lys-CTT-1-5 Sc: 78.0 GCCCGGGTAGCTCAATCGGT.A.GAGCGTGTGGCTCTTAtcacaaagcagtacaagatc......................ACCTCAAG...........GtCGTGGGTTCGAGCCCCACCTCGGGCT tRNA-Lys-CTT-1-4 Sc: 77.9 GCCCGGGTAGCTCAATCGGT.A.GAGCGTGTGGCTCTTAcgacctgtctgtagcaatactgtctgcgtcaagatc......ACCTCAAG...........GtCGTGGGTTCGAGCCCCACCTCGGGCT tRNA-Lys-CTT-1-3 Sc: 77.3 >>>>>>>..>>>>..........<<<<.>>.>>.................................................<<.<<................>>>>>.......<<<<<<<<<<<<. GCCCGGCTAGCTCAAT.GGTtA.GAGCGTGTGGCTTTTAccaagaaaaaaatcttagcaaaaagacaa.............ACCTCAAG...........GcTCCGAGTTCGAGTCTCGGGTCGGGCT tRNA-Lys-TTT-1-2 Sc: 70.8 GCCCGGCTAGCTCAAT.GGTtA.GAGCGTGTGGCTTTTActaaggaacttagcaaaagggatgcaaaatccacggaaaaaaACCTCAAG...........GcTCCGAGTTCGAGTCTCGGGTCGGGCT tRNA-Lys-TTT-1-1 Sc: 70.3
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>..................................................<<<<................>>>>>........................<<<<..<<<<<<<<. GCCTTCTTGGCTTAGTTGGTtA.AAGCGTCGGTCTCATAttcgtatgatctgcctgttcaacagttgcagagtt......ATCCGAAG...........GtCGTGAGTTCGATT.................CTCA..CAGAGGGCA tRNA-Met-CAT-1-1 Sc: 76.4 GTCTTCTTGGCTTAGTTGGTtA.AAGCGTCGGTCTCATAagattcgttcttgtgatctgtgtgggaaacgcaacagagacATCCGAAG...........GtCGTGAGTTCGACT.................CTCA..CAGAGGACA tRNA-Met-CAT-2-1 Sc: 71.5 >>>>>>>..>>>>..........<<<<.>>>>>................................................<<<<<................>>>>>........................<<<<..<<<<<<<<. AGCAATTTGGCGCAGA.GGA.A.GCGCGCGGGGCTCATA.........................................ACCCTGAG...........GtCCCAAGATCGAAA.................CTTG..GAATTGCTA tRNA-iMet-CAT-1-1 Sc: 57.0 AGCAATTTGGCGCAGA.GGA.A.GCGCGCGGGGCTCATA.........................................ACCCTGAG...........GtCCCAAGATCGAAA.................CTTG..GAATTGCTA tRNA-iMet-CAT-1-2 Sc: 57.0 AGCAATTTGGCGCAGA.GGA.A.GCGCGCGGGGCTCATA.........................................ACCCTGAG...........GtCCCAAGATCGAAA.................CTTG..GAATTGCTA tRNA-iMet-CAT-1-3 Sc: 57.0 AGCAATTTGGCGCAGA.GGA.A.GCGCGCGGGGCTCATA.........................................ACCCTGAG...........GtCCCAAGATCGAAA.................CTTG..GAATTGCTA tRNA-iMet-CAT-1-4 Sc: 57.0 AGCAATTTGGCGCAGA.GGA.A.GCGCGCGGGGCTCATA.........................................ACCCTGAG...........GtCCCAAGATCGAAA.................CTTG..GAATTGCTA tRNA-iMet-CAT-1-5 Sc: 57.0 >.>>>....>>>>..........<<<<.>>>>..................................................<<<<................>>>.>........................<.<<..<..<<<.<. GCCTTCTTGGCTTAGTTGGTtA.AAGCGTCGGTCTCATAccctgtatgatctgcttgtccacattcagagtt........ATCCGAAG...........GtCGTGAGTTCGACTcgtgagtgccactgtttCCCAtcCCCAAGACC tRNA-Met-CAT-3-1 Sc: 27.2
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGGCTTTAGCTCACTTGGGAGAGCGCCAGACTGAAGcctaacttcaggaaagat...........ATCTGGAG...........GcACTGTGTTCGATCCACAGAAGCCGCA tRNA-Phe-GAA-1-3 Sc: 59.4 GCGGCTTTAGCTCACTTGGGAGAGCGCCAGACTGAAGcctaacttcagacaaagacatct......ATCTGGAG...........GcACTGTGTTCGATCCACAGAAGCCGCA tRNA-Phe-GAA-1-2 Sc: 59.2 GCGGCTTTAGCTCACTTGGGAGAGCGCCAGACTGAAGtccacttcattccatcattaccgattgatATCTGGAG...........GcACTGTGTTCGATCCACAGAAGCCGCA tRNA-Phe-GAA-1-1 Sc: 59.0
Pro tRNAs
>>>>>>>..>>>.................<<<.>>>>>.......................................................................................................<<<<<....................>>>>>.......<<<<<.<<<<<<<. GGTGCATTGGTCT.AGCGGT.A......TGATTCTCGCTTAGGGttcactctaaacatgca...............................................................................TGCGAG.AG..............GtCCCCGGTTCAATCCCGGG.ATGCGCCC tRNA-Pro-AGG-1-1 Sc: 56.7 GGTGCATTGGTCT.AGCGGT.A......TGATTCTCGCTTAGGGtccaccctaatcattgta..............................................................................TGCGAG.AG..............GtCCCCGGTTCAATCCCGGG.ATGCGCCC tRNA-Pro-AGG-1-2 Sc: 56.6 >>>>>>>..>>>.................<<<....>.........................................................................................................<.......................>>>>>.......<<<<<.<<<<<<<. GGTGCATTGGTCT.AGCGGT.A......TGATTCTCGCTTAGGGttcactctaaacatgtctgcgagaggtgtaagttcatccaattcacgtatgctatacataagccatactaacat......................AACACC.A...............G.CCCCGGTTCAATCCCGGG.ATGCGCCC tRNA-Pro-AGG-2-1 Sc: 32.6 >>>>>>>..>>>.................<<<..>.>.........................................................................................................<.<.....................>>>>>.......<<<<<.<<<<<<<. GGTGCATTGGTCT.AGCGGT.A......TGATTCTCGCTTAGGGttcaccctaaacatgtatgcgagaggtgtaagttcaactcaccactcggtatgctatacaaaagcagtact.........................AACAAA.ATTTCA..........G.CCCCGGTTCAATCCCGGG.ATGCGCCC tRNA-Pro-AGG-3-1 Sc: 32.0 >>>>>>>..>>>.................<<<.>>>>>.......................................................................................................<<<<<....................>>>>>.......<<<<<.<<<<<<<. GGCTCGATGGTCT.AGTGGT.A......CGATTCTTGCTTCGGGctttcccctgagttctgctcagatccaa....................................................................TGTGAG.AG..............GtCCCGGGTTCAATCCCCGG.TCGAGCCC tRNA-Pro-CGG-1-1 Sc: 50.8 >>>>>>>..>.>.................<.<.>>>>>.......................................................................................................<<<<<....................>>>>>.......<<<<<.<<<<<<<. GGCTCAATGGTCTa...GGTtA....gtTGCCTTCACATCTCCGgatttcgtcactttgaggcgtgttgagactaacaagcgcacagtggtatgattgttgcttcgggaatactccaacgtccccctcgttcagaggaaaCTGTGAcAG..............GcCCCGGGTTCAAATCCCGG.TTGAGCCC tRNA-Pro-CGG-2-1 Sc: 23.1 >>>>>>>..>>>.................<<<.>>>>>.......................................................................................................<<<<<....................>>>>>.......<<<<<.<<<<<<<. GGCTGAATGGTTT.AGTGGT.A......TAATTCTTGCTTTGGGttacgtgcaaac....................................................................................TGCAAG.AG..............GtCCTGGGTTCGATTCCCAG.TTCAGCCC tRNA-Pro-TGG-1-2 Sc: 68.5 GGCTGAATGGTTT.AGTGGT.A......TAATTCTTGCTTTGGGttcaccacaccaacc.................................................................................TGCAAG.AG..............GtCCTGGGTTCGATTCCCAG.TTCAGCCC tRNA-Pro-TGG-1-1 Sc: 68.4
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>..................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<...<. GGCGACTTGGCGGAGTGGTt.A.ACGCGATAGACTAGAA...........................ATCTATT.TCTTTC.......GGGAG.CGTAGGTTCAAATCCTGC.AGTCGT...CG tRNA-Ser-AGA-1-1 Sc: 71.2 GGCGATTTGGCGGAGTGGTt.A.ACGCGGTAGACTAGAA...........................ATCTACT.TCCTTC.......GGGAG.CGTAGGTTCAAATCCTGC.AGTCGT...CG tRNA-Ser-AGA-2-1 Sc: 67.3 GGCGATTTGGCGGAGTGGTt.A.ACGCGGTAGACTAGAA...........................ATCTACT.TCCTTC.......GGGAG.CGTAGGTTCAAATCCTGC.AGTCGT...CG tRNA-Ser-AGA-2-2 Sc: 67.3 GTCGCGATGGCAGAGCGGTctA.ATGCGGTAGACTAGAActtctcacgaaatcttgat........ATCTACT.CTCTTC.......GGAGG.CGCAGGTTCGAATCCTGC.TCGCGA...CT tRNA-Ser-AGA-3-1 Sc: 65.8 >>>>>>>..>>>............<<<.>>>>>..................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<...<. GACAACGTGCCAGAGTGGTt.A.ATGGGTATGACTCGAAtcctagatccgtgtgacctaggtagatATCATAT.GGATTC.......GTCCG.CGTAGGTTCAAATCCTGC.CGTTGT...CG tRNA-Ser-CGA-1-1 Sc: 59.9 GACAACGTGCCAGAGTGGTt.A.ATGGGTATGACTCGAAcactgggtcttagtgacacatcaagatATCATAT.GGATTC.......GTCCG.CGTAGGTTCAAATCCTGC.CGTTGTgctCA tRNA-Ser-CGA-2-1 Sc: 53.1 >>>>>>>..>>>............<<<.>>>>>..................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<...<. GGCGATTTGGCGGAGTGGTt.A.ACGCGGTAGACTTGAA...........................ATCTACT.TCCTTC.......GGGAG.CGTAGGTTCAAATCCTGC.AGTCGT...CG tRNA-Ser-TGA-1-1 Sc: 67.3 >>>>>>>..>>>............<<<.>>>>>..................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<...<. GTCATGATGCCAGAGTGGTt.A.ATGGGTAAGACTTGAAtcctcagcgatagat............ATCTTATGGCTT.........CGGCCtCGCAGGTTCAAATCCTGT.TCATGA...CG tRNA-Ser-TGA-2-1 Sc: 58.6 >>>>>>>..>>>............<<<.>>>>>..................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<...<. GGCACCATCGCATAGTGGCt.A.TTGCGACAGCTTGCTAccttcttcagttact............CGCTGTT.TCCTTC.......GGGAG.CGGGAGTTCGAGTCTCCC.TGGTGT...CG tRNA-Ser-GCT-3-1 Sc: 44.9 .>>>.>>..>>>............<<<.>>>>>..................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<.<<<..... CACAGTTTGGCGGAGTGGTt.A.ACGCGATGGCCTGCTAaattagctgac................AGCCATT.TCCTTC.......GGGAG.CGAGTGTTCGAATCACTC.AGGTGT...CG tRNA-Ser-GCT-1-1 Sc: 41.8 >....>>..>>>............<<<.>>>>>..................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<.......<. G....TTTGGCGGAGTGGTt.A.ACGCGATGGCCTGCTAattaattagttgac.............AGCCATT.TCCTTC.......GGGAG.CGAGTGTTCGAATCACTC.AGGTGT...CG tRNA-Ser-GCT-2-1 Sc: 38.2
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<.<.>>>>>......................................................................................<<<<<................>.>>>.............<<<.<.<<<<<<<. GCCCTCGTAGCTCAATGGT.A.GAG.CGCGTCACTAGTA...............................................................................ATGACGAG...........GtTGCCGGTTCGATT......CCGTC.CGAGGGCA tRNA-Thr-AGT-1-1 Sc: 77.8 GCCCTCGTAGCTCAATGGT.A.GAG.CGCGTCACTAGTAacattgatataccaaggtttgggtcatgtggtacaa...........................................ATGACGAG...........GtTGCCGGTTCGATT......CCGTC.CGAGGGCA tRNA-Thr-AGT-1-2 Sc: 69.5 >>>>>>>..>>>>.........<<<.<.>>>.>......................................................................................<.<<<.................>>.>.............<.<<..<<<<<<<. GCCCTCGTAGCTCAATGGT.A.GAG.CGCGTCACTAGTAatgacgaggttgccgggtatgtcattatagcaagtcgaaagaaggtcgtcacta.........................ATTGCGA............G.TTATAGTTCGATT......CCGTC.CGAGGGCA tRNA-Thr-AGT-2-1 Sc: 41.5 >>>>>>>..>>>...........<<.<.>>>>>......................................................................................<<<<<................>>>>>.............<<<<<.<<<<<<<. GCCCGCATGGCACAGTGGT.A.ATG.CGTCTCACTCGTAagtcaacacgatgaacacgcac.........................................................ATGAGAAG...........AtCCGCGGTTCAATT......CCGCG.TGTGGGCA tRNA-Thr-CGT-1-1 Sc: 68.7 ..>>>>>..>>>>.........<<<.<.>>>>>......................................................................................<<<<<................>.>>>.............<<<.<.<<<<<... AGCGGATTGGCCTAGTGGT.A.GGGcCATCCCACTCGTAcagcaaggaccgcttggttgtcaattgtcaattgcgaattgctaattgcgaattgcggtacccacgtg...........ATGGGGAG...........AtCACTGGTTCAATCccaatcCCAAT.ATTCGGCA tRNA-Thr-CGT-2-1 Sc: 29.5 >>>>>>>..>>>>.........<<<.<.>>>>>......................................................................................<<<<<................>>>>>.............<<<<<.<<<<<<<. GCCTCTATAGCTCAGTGGT.A.GAG.CGCAGCACTTGTActgac..........................................................................ATGCTGAG...........GtCCGTTGTTCAATC......CAGCG.TGGAGGCA tRNA-Thr-TGT-1-1 Sc: 71.3 GGCCTGGTAGTGCAGCGGTtA.GCA.TACCACATCTGTAattgttgggttgtaaccttagggttgatttcctgtatcaaaaactgtacttgtagctcctcggggtgtgagtgtagaagATGTGGAG...........A.TGGGGGTTCGACT......CCTCC.CTAGGCCA tRNA-Thr-TGT-2-1 Sc: 51.7
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>...............................................................<<<<.....................>>>>>.......<<<<<.<<<<<<<. GAACGATTGGCGCAGTGGT.A.GCGCACCTGATTCCAGtttccatgacaccaggaatt..................................TCCAGGCG................GtCATCCGTTCGATCCGGAT.ATCGTTCA tRNA-Trp-CCA-2-1 Sc: 52.8 GAACGATTGGCGCAGTGGT.A.GCGTACCTGATTCCAGttatataacaggggat......................................TCCAGGCG................GtCACCCGTTCGATCCGGGT.ATCGTTCA tRNA-Trp-CCA-1-1 Sc: 50.7 >>>>>>>..>>.>.........<.<<.>.>>>.............................................................<<<.<..>..>.......<...<...>>>>>.......<<<<<.<<<<<<<. GGACCGCTGGCGCAACGGCgT.GAGTAGCCCACTCGTGtccctacatatggtatgctctaacaagcaatgcagagcgcgttcgcctccagagATGGCTC.CAGC.......GaAAGGtTATCCGTTCAAATCGGGT.GTGGTTCA tRNA-Trp-CCA-3-1 Sc: 21.2
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>...................<<<<<................>>>>>.......<<<<<<<<<<<<. CCCTCGGTCGTCTAGTTGGTttATGGCGTCGGACTGTAAtagatcagtttcATCCGAAT...........GtCGCGCGTTCGACTCGCGCCTGAGGGA tRNA-Tyr-GTA-1-1 Sc: 57.1
Val tRNAs
>>>>>>>..>>>............<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCGGGTGGTGTAGTTGGTtA.TCACATCTCGTTAACAgtttcactgtgacacaata...........CCGAGAAG...........GtCCTGGGATCGAGCCCCAGCCTGATCA tRNA-Val-AAC-1-1 Sc: 64.4 GGTCGGGTGGTGTAGTTGGTtA.TCACATCTCGTTAACAgtttgactgtaacacaata...........CCGAGAAG...........GtCCTGGGATCGAGCCCCAGCCTGATCA tRNA-Val-AAC-1-2 Sc: 64.4 GGTCGGGTGGTGTAGTTGGTtA.TCACATCTCGTTAACAgttctactgtaacacaata...........CCGAGAAG...........GtCCTGGGATCGAGCCCCAGCCTGATCA tRNA-Val-AAC-1-4 Sc: 64.4 GGTCGGGTGGTGTAGTTGGTtA.TCACATCTCGTTAACAgtttactgtgacacaata............CCGAGAAG...........GtCCTGGGATCGAGCCCCAGCCTGATCA tRNA-Val-AAC-1-5 Sc: 64.4 GGTCGGGTGGTGTAGTTGGTtA.TCACATCTCGTTAACAgttctgactgtggcataata..........CCGAGAAG...........GtCCTGGGATCGAGCCCCAGCCTGATCA tRNA-Val-AAC-1-3 Sc: 64.3 >>>>>>>..>>>............<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGTCGTATGGTCTAAT.GGTtA.TGATATCTCGTTCACAagtacatgaacagtct..............CCGAGATG...........GtTCTGAGTTCGATCCTCAGTACGACTA tRNA-Val-CAC-1-1 Sc: 55.8 >>....>..>>>............<<<.>>>>>.....................................<<<<<................>>.>.........<.<<<....<<. GT....ATGGTCTAAT.GGTtA.TGATATCTCGTTCACAagcatctgaacagttt..............CCGAGATG...........GtTCTGAGTTCGATCGTAAGTAGAAATG tRNA-Val-CAC-2-1 Sc: 23.9 >>>>>>>..>>>............<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCGTTTGGTGTAGT.GGTtA.TCACGTTTCCTTTACAgtgcaggatgagtaatcatagtgcttcgatCGGAAAAG...........GtCGCCGGTTCGACCCCGGCAGTGGTCA tRNA-Val-TAC-1-1 Sc: 63.8