Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>...........<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGGATGGTTTAGTGGT.A.TAATACTCCCTTAGCAagtttccgtctacggtactgatc..TGGGAGTG...........GtCCGGGGTTCGATTCCCCGTTCGTCCA tRNA-Ala-AGC-1-1 Sc: 64.9 GGGCGGATGGTTTAGTGGT.A.TAATACTCCCTTAGCAtggttccccctaacagggtctgattTGGGAGTG...........GtCCGGGGTTCGATTCCCCGTTCGTCCA tRNA-Ala-AGC-1-2 Sc: 64.8 GGGCGGATGGTTTAGTGGT.A.TAATACTCCCTTAGCAagattccttctaatggattcagattTGGGAGTG...........GtCCGGGGTTCGATTCCCCGTTCGTCCA tRNA-Ala-AGC-1-3 Sc: 64.8 GGGCGGATGGTTTAGTGGT.A.TAATACTCCCTTAGCAagattcattcaactgagttatc...TGGGAGTG...........GtCCAGGGTTCGATTCCCTGTTCGTCCA tRNA-Ala-AGC-2-1 Sc: 64.0 >>>>>>>..>>>>.........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGTACTTCGTCAAGTGGT.A.TGATGCCTGATCCGCAtaataacgatcatgttataaggcttTTCAGGAG...........GtCCGGGGTTCGATTCCCTGAGTATCCA tRNA-Ala-CGC-1-1 Sc: 46.8 >>>>>>>..>>>...........<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGAAATAGTGTAGGGGTtA.TCGCGTCTGCTTTGCA.........................TGTAGAAG...........GtCCGGGGTTCAAATCCCCGTTTCTCCA tRNA-Ala-TGC-1-1 Sc: 64.5 GGGGAAATGGTGTAGGGGTtC.TCACATTTGCTTTGCA.........................TGTAGAAG...........GtCCGGGGTTCAAATCCCCGTTTCTCCA tRNA-Ala-TGC-2-1 Sc: 57.0
Arg tRNAs
>>>>>.>..>>>>..........<<<<.>>>>>.................................................................<<<<<.......................>>>>>.......<<<<<.<.<<<<<. GGCCGTGTAGCTCAATGGC..A.GAGCGTCTGACTACGAttgacgacaagttgatttcatgta..................................ATCAGAAG..................GtCGCAGGTTCGACCCCTGT.CTCGGTCA tRNA-Arg-ACG-1-3 Sc: 69.4 GGCCGTGTAGCTCAATGGC..A.GAGCGTCTGACTACGAttaactacaagttaagtttcctgta.................................ATCAGAAG..................GtCGCAGGTTCGACCCCTGT.CTCGGTCA tRNA-Arg-ACG-1-2 Sc: 69.3 GGCCGTGTAGCTCAATGGC..A.GAGCGTCTGACTACGAatagtgtccaccgatacttgatatgta...............................ATCAGAAG..................GtCGCAGGTTCGACCCCTGT.CTCGGTCA tRNA-Arg-ACG-1-5 Sc: 69.3 GGCCGTGTAGCTCAATGGC..A.GAGCGTCTGACTACGAtgcagtattcttaaagtattcttagcacacgta.........................ATCAGAAG..................GtCGCAGGTTCGACCCCTGT.CTCGGTCA tRNA-Arg-ACG-1-4 Sc: 69.0 GGCCGTGTAGCTCAATGGC..A.GAGCGTCTGACTACGAttaacaagtatcgatctagcgatacctgatgtatgta.....................ATCAGAAG..................GtCGCAGGTTCGACCCCTGT.CTCGGTCA tRNA-Arg-ACG-1-1 Sc: 68.9 >>>>>>>..>>>............<<<.>>>>>.................................................................<<<<<..>>>>..........<<<<...>>>>>.......<<<<<.<<<<<<<. GACACTTTGGCCGAGTGGTt.A.AGGCGATGCCCTGCGTacgtagcaactcactaatatctgaatctaactcaatcactaacctatgataaatagtaAGGCATT.ACATTC........GTGTG.CGCAGGTTCGAATCCTGC.AGGTGTCG tRNA-Arg-GCG-1-1 Sc: 54.0 GACACTTTGGCCGAGTGGTt.A.AGGCGGTGCCCTGCGTaagttatctcgattgacccaatcaacgctatctcatccgctaaccctaaaaaatagtaAGGCATT.ACATTC........GTGTG.CGTAGGTTCGAATCCTGC.AGGTGTCG tRNA-Arg-GCG-2-1 Sc: 50.9 GACACTTTGGCCGAGTGGTt.A.AGGCGGTGTCCTGCGTaagtcactcactcaatctcgcacgtctgcaacttcatagctaaccttccatagta...AGGCATT.ACATTC........GTGTG.CGTAGGTTCGAATCCTGC.AGGTGTCG tRNA-Arg-GCG-3-1 Sc: 50.3 >>>>>>>..>>>>..........<<<<.>>>>>.................................................................<<<<<.......................>>>>>.......<<<<<.<<<<<<<. GGTCTCGTAGATCAATGGCttA.GATCGCGGCTTTCCGG..........................................................TGGCCGAG..................GtTCCAGGTTCGAGTCCTGG.CGGGATCG tRNA-Arg-CCG-1-1 Sc: 53.1 >>>>>>>..>>>>..........<<<<.>>>>>.................................................................<<<<<.......................>>>>>.......<<<<<.<<<<<<<. GGCCGCGTGGCCTAATGGCt.A.AGGCGCTAGATTTCGGttatccgtccgattt...........................................CTCTAGAG..................AtTCCAGGTTCGACTCCTGG.CGTGGTCG tRNA-Arg-TCG-1-2 Sc: 59.2 GGCCGCGTGGCCTAATGGCt.A.AGGCGCTAGATTTCGGttatcgtgagccgccgagct......................................CTCTAGAG..................AtTCCAGGTTCGACTCCTGG.CGTGGTCG tRNA-Arg-TCG-1-1 Sc: 59.0 >>>>>>>..>>>>..........<<<<.>>>>>.................................................................<<<<<.......................>>>>>.......<<<<<.<<<<<<<. GGCGTGCTGGCGCAATGGT..A.GCGCGTAGTCCTCCTA..........................................................AGACTAAG..................GtTCAGGGTTCGAGTCCCTG.GTACGTCG tRNA-Arg-CCT-1-1 Sc: 70.9 >>>>>>>..>>>>..........<<<<.>.>>...................................................................<<.<.......................>>>>>.......<<<<<.<<<<<<<. GCCCCCGTGGCCTAATGGCt.A.AGGCGTGAGACTTCTAatctcaagattggtaagtgatcctgtttcaacagaaaaagcgtaaattatgct.....AACTAGA.....ATA...........A.AGCGGGTTCGAGTCCCGC.CGGGGGTT tRNA-Arg-TCT-1-1 Sc: 49.3
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>......................................................................<<<<..<................>>>>>.......<<<<<.<<<<<<<. GCCTCTATAGCTCAAC.GGT.C.GAGCATATAACTGTTA...............................................................ATTAT..ATG...........A.TAGACGTTCGATTCGTCT.TAGGGGCT tRNA-Asn-GTT-4-1 Sc: 54.4 >>>>>>>..>>>>..........<<<<.>.>>>......................................................................<<<...<................>>>>>.......<<<<<.<<<<<<<. TCCTCCGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTAatcaggaggtgagtttccatacattcgcatggagtgtgtagcaacgcaacatactaatccaatTTCAT..AG............GtTGAAAGTTCGAGCCTTTC.CGGGGGAG tRNA-Asn-GTT-3-1 Sc: 53.6 >>>>>>>..>>>>..........<<<<.>>.>>......................................................................<<.<..<................>>>>>.......<<<<<.<<<<<<<. TCCTCCGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTAatcaggaggtgagtctctaacatcgcacgaaatgtcacacgtcaatatactcatta.......ATTCGtaAAG...........GtTGAAAGTTCGAGCCTTTC.CGGGGGAG tRNA-Asn-GTT-1-1 Sc: 47.5 >>>>>>>..>>>>..........<<<<.>..>>......................................................................<<....<................>>>>>.......<<<<<.<<<<<<<. TCCTCCGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTAatcaggaggtaagatatccgaatatatctgatatctagtgacgaaataatgttaacata....ATTCC..AAG...........GtTGAAAGTTCGAGCCTTTC.CGGGGGAG tRNA-Asn-GTT-2-1 Sc: 44.3
Asp tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. TCTTCCGTAGTATAGT..GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-1 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-2 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-3 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-4 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-5 Sc: 69.5 >>>>>>>...>>>...........<<<..>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GAATTAGTAACTTAATTaGGT.A.AAGGATTTCCCTGTCACGGAAATA...........GaTGTCGGTTCGATTCTGATCTAATTCG tRNA-Asp-GTC-2-1 Sc: 31.2
Cys tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GTCCGTATGGTCTAGTGGTtA.TGATGGCAGATTGCAAATCTGTAG...........AtCCCTGGTTCAAATCCGGGTACGGACT tRNA-Cys-GCA-2-1 Sc: 75.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GTCCGTATGGTCTAGTGGTtA.GGATGGCAGATTGCAAATCTGTAG...........AtCCCTGGTTCAAATCCGGGTACGGACT tRNA-Cys-GCA-1-1 Sc: 75.7
Gln tRNAs
>>>>>>>..>>>............<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCCATGGTCTAAC.GGTtA.TGACTGCGGATTCTGA....................TTCCGCCA...........G.CGAGGGTTCGACTCCCTCTGGAACCT tRNA-Gln-CTG-1-1 Sc: 58.7 GGTTCCATGGTCTAAC.GGTcA.TGACTGCGGATTCTGA....................TTCCGCCA...........G.CGAGGGTTCGACTCCCTCTGGAACCT tRNA-Gln-CTG-2-1 Sc: 58.7 >>>>>>>..>>>............<<<.>>>>>...........................<<<<<................>.>>>.......<<<.<<<<<<<<. GGTTCCATGGTCTAAC.GGTtA.TGACTGCGGATTCTGA....................TTCCGCCA...........G.CGAGGGTTCGACTCCCCCTGGAACCT tRNA-Gln-CTG-3-1 Sc: 53.0 >>>>>>>..>>>>..........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCCGGTGGTGTAAA.GGCtA.GCATTCTAGACTTTGActtcggcattggctcatttaATCTGGCG...........A.TCCGGGTTCGAATCCCGGCCGGACCT tRNA-Gln-TTG-1-1 Sc: 53.2 TCTGGAATAGTCTAATAGGT.A.GGACATAAATTTTTGA....................TGTTTAGC...........AgTGAGTGTTCGAATCACTCTTCCAGAA tRNA-Gln-TTG-2-1 Sc: 41.0
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..............................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCA.......................CCGAGCAG...........CCCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-1 Sc: 56.5 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCA.......................CCGAGCAG...........CCCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-2 Sc: 56.5 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCA.......................CCGAGCAG...........CCCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-3 Sc: 56.5 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCA.......................CCGAGCAG...........CCCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-5 Sc: 56.5 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCAagtatccttatcaagtattcttaCCGAGCAG...........CCCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-4 Sc: 48.7 >>>>>>>..>>>...........<<<.>>>>>..............................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGATGTGGTGTAGTGGCtA.TCATACTGCGCTTTCAaggttagcctggaagct......CCGCAGGG...........ATCGGGGTTCGATTCCCCGCATCGGAG tRNA-Glu-TTC-1-2 Sc: 56.0 TCCGATGTGGTGTAGTGGCtA.TCATACTGCGCTTTCAtagtccgagacttgggagtg...CCGCAGGG...........ATCGGGGTTCGATTCCCCGCATCGGAG tRNA-Glu-TTC-1-1 Sc: 55.9
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<.....................>>>>>.......<.<<<<.<<<<<<<. ACAATCATAGGTTAAGGGG.A.AACTATTCGTCTACCA...........AACGAAA.................TtTGTCAGTTCGATTC.TGAC.TGATTGTA tRNA-Gly-ACC-1-1 Sc: 40.8 >>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<.....................>>>>>.......<.<<<<.<<<<<<<. GCGTGATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAcccgagcaacgTCGGGGAG................C.CCTGGGTTCGATTC.CCAG.ATCACGCA tRNA-Gly-GCC-1-1 Sc: 58.9 GCGTGATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtccgagcagcgTCGGGGAG................C.CCTGGGTTCGATTC.CCAG.ATCACGCA tRNA-Gly-GCC-3-1 Sc: 58.9 GCGTAATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtcagagcaacgTCGGGGAG................C.CCTGGGTTCGATTC.CCAG.ATTACGCA tRNA-Gly-GCC-2-1 Sc: 58.1 GCGTAATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtccgagcaacgTCGGGGAG................C.CCTGGGTTCGATTC.CCAG.ATTACGCA tRNA-Gly-GCC-4-1 Sc: 58.1 GCGTAATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtgcgggcaacgTCGGGGAG................C.CCTGGGTTCGATTC.CCAG.ATTACGCA tRNA-Gly-GCC-4-2 Sc: 58.1 >>.>>>>..>>>>.........<<<<.>>>.>..................<.<<<...>.>........<.<....>>.>>.......<.<.<<.<<<<.<<. GCGTAATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCA...........TCCGAGCAACGTA......GGGGAGcCCTGGGCTCGATTC.CAAG.ATTAAGCA tRNA-Gly-GCC-5-1 Sc: 30.4 >>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<.....................>>>>>.......<.<<<<.<<<<<<<. GCGTGAATAGTGTAGCGGTtA.GCATGCATGCTTCCCA...........AGCATGCG................A.CCCGGGTTCGAGTC.CCGG.TTCACGCA tRNA-Gly-CCC-1-1 Sc: 71.3 >>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<.....................>>>>>.......<.<<<<.<<<<<<<. GCGGCCATGGTGTAACGGTtA.GCATGGCTGATTTCCA...........TTCAGCCG................A.CTCGGGTTCGACTC.CCGA.TGGCCGCA tRNA-Gly-TCC-1-1 Sc: 59.6 GCGGCCATGGTGTAACGGTcA.GCATGGCTGATTTCCA...........TTCAGCCG................A.TTCGGGTTCGACTC.CCGA.TGGCCGCA tRNA-Gly-TCC-2-1 Sc: 57.2 GAGAGTATAGTTTAAGGGT.A.AAACCGTAGCGTTCCA...........TGTTACAA................A.TCCGGGTTCGAATCtCCGG.TATTCTTA tRNA-Gly-TCC-3-1 Sc: 29.0
His tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGCAGTCGTCTAGG.GGTaA.GGACACCAGTTTGTGGatctagcgaga......CACTGGAA...........A.CCGAGGTTCGAGTCCTCGCTGCGGCA tRNA-His-GTG-1-1 Sc: 53.8 GCCGCAGTCGTCTAGG.GGTaA.GGACACCAGTTTGTGGttcgtctcatacgaaatCACTGGAA...........A.CCGAGGTTCGAGTCCTCGCTGCGGCA tRNA-His-GTG-1-2 Sc: 53.4 >>>>.>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<.<<<<. GTGGTTATAGTTCAATCGGT.A.GAGCAACTGTATGTGG.................CACAGTAA...........GtTCTTGGTTCAAATCCAAGTATCCACC tRNA-His-GTG-2-1 Sc: 43.7
Ile tRNAs
>>>>>>>..>>>>..........<<<.<.>>>>>...........................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCCGTAGCTCAGTTGGTtA.GAG.CTTCGTACTAATAaacattagtg..........................................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-1 Sc: 77.7 GCTTCCGTAGCTCAGTTGGTtA.GAG.CTTCGTACTAATAagcgttagtg..........................................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-2 Sc: 77.7 GCTTCCGTAGCTCAGTTGGTtA.GAG.CTTCGTACTAATAaacgttagtg..........................................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-3 Sc: 77.7 GCTTCCGTAGCTCAGTTGGTtA.GAG.CTTCGTACTAATAaagattagtg..........................................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-4 Sc: 77.7 GCTTCCGTAGCTCAGTTGGTtA.GAG.CTTCGTACTAATAaacgttagtg..........................................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-5 Sc: 77.7 >>>>.>>..>>>>..........<<<.<..>>>.............................................................<<<.................>>>>>.......<<<<<<<.<<<<. GCCCTCGTAGCACAGT.GGT.A.GTGgTAAGTTTCTGATCatcttcaagtctctgaattcctcagctaacatggcatagcgcgtcactcgtaATGACGAG...........GtCGTCTGTTCGATCCAGGCCGCGGGCA tRNA-Ile-GAT-1-1 Sc: 34.8 >>>>>>>..>>>>..........<<<.<.>>>>.............................................................<<<<................>>>>>.......<<<<<<<<<<<<. GTTCCCGTAGCGGAGT.GGTtA.CCG.CGTGACTCTTATAgtctaaggattcttctttggttctatgctagta...................ATGTCAAG...........GtCCGGGGTTCGACCCCCCGCGGGAACA tRNA-Ile-TAT-1-1 Sc: 63.3
Leu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>..........................................<<<<<..>>...............<<....>>>>>.......<<<<<.<<<<<<<. GGTGAGATGGCCGAGTTGGTt.A.TGGCGTCAGGTTAAGGttaccttaacaccctgtg.................TCCTGATGGAGC...........AATCCt.CCTGGGTTCGAGTCCCAG.TCTCATCA tRNA-Leu-AAG-1-1 Sc: 60.1 GGTGAGATGGCCGAGTTGGTt.A.TGGCGTCAGGTTAAGGctaccttagcaccaacc..................TCCTGATGGAGC...........AATCCt.CCTGGGTTCGAGTCCCAG.TCTCATCA tRNA-Leu-AAG-1-2 Sc: 60.1 GGTGAGATGGCCGAGTTGGTt.A.TGGCGTCAGGTTAAGGtcaccttaacaactaccagtt..............TCCTGATGGAGC...........AATCCt.CCTGGGTTCGAGTCCCAG.TCTCATCA tRNA-Leu-AAG-1-3 Sc: 59.9 >>>>>>>..>>>.............<<<.>>>>>..........................................<<<<<..>>>.>.........<.<<<....>>>>>.......<<<<<.<<<<<<<. GGCACTTTGGCCGAGT.GGTctA.AGGCGCCGTGTTCAGGttagtcgactcgttcgactaagctcat........TCGCGGT.CTAGT.........AATAGG..CGAGGGTTCGAATCCCTC.AGGTGTCA tRNA-Leu-CAG-1-1 Sc: 58.7 GGCACTTTGGCCGAGT.GGTctA.AGGCGCCGTGTTCAGGtgtccaaccggattcatccgattgcccctat....TCGCGGT.CTAGT.........AATAGG..CGAGGGTTGGAATCCCTC.AGGTGTCA tRNA-Leu-CAG-2-1 Sc: 49.7 >>>>>>>..>>>.............<<<.>>>>>..........................................<<<<<..>>>>...........<<<<....>>>>>.......<<<<<.<<<<<<<. GCGAGTCTGGCCGAGT.GGTt.A.AGGCGTTGTGTTTAGGacatgcctacaatggcatacgcttgaa........CCGCAAT.GGGC.ATT.......GCCCG..CGTAGGTTCGATCCCTAC.GGCTCGCA tRNA-Leu-TAG-1-1 Sc: 70.1 >>>>>>>..>>>>...........<<<<.>>>>............................................<<<<..>>>.............<<<....>>>>>.......<<<<<.<<<<<<<. GGCAGAATGGCCGAGT.GGTctA.TGGCGACGGTCTCAAGcacttataagtactttcgcctgcgaaaagcagcg.TTCCGTT.CACGA.........AAGTGG..CCGGGGTTCGAATCCCCG.TTCTGTCA tRNA-Leu-CAA-1-1 Sc: 53.1 GGCAGAATGGCCGAGT.GGTctA.TGGCGACGGTCTCAAGcacagtatatgtactttcgcctgcgaaaagcagcgTTCCGTT.CACGA.........AAGTGG..CCGGGGTTCGAATCCCCG.TTCTGTCA tRNA-Leu-CAA-1-2 Sc: 53.1 >>>>>>>..>>>.............<<<.>>>>>..........................................<<<<<...>>.............<<.....>>>>>.......<<<<<.<<<<<<<. ACCAAGATGGCCGAGT.GGTt.A.AGGCGGTGGGCTTAAGcgatttttggcgtaat...................TTCCACT.ATCG...........AGAGAttCCTGGGTTCGAACCCCAG.TCTTGGTA tRNA-Leu-TAA-1-1 Sc: 52.7 >.>.>>>..>>>>...........<<<<..>>>............................................<<<...>>.>...........<.<<....>>>>>.......<<<<<.<<<.<.<. GCCCTTATAGCGTAGT.GGTtaA.GCGCTATAGAGCCCTA...................................TCTTAGT.CTAG...........CAGGG..AGCTGGTTTAAACCCGGC.TAAAGACA tRNA-Leu-TAA-2-1 Sc: 31.4
Lys tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...................<<<<.<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAgagtacacgaa.ATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-1-1 Sc: 78.3 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAagagtacacgaaATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-1-2 Sc: 78.2 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAagagtacacgaaATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-1-3 Sc: 78.2 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAcgagtgcacgaaATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-1-4 Sc: 78.2 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAtgagtacacgaaATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-1-5 Sc: 78.2 >>>>>>>..>>>>..........<<<<.>>>>>...................<<<<.<................>>>>>.......<<<<<<<<<<<<. GCCCGGGTAGCTCAAT.GGCtA.GAGCGTGGGACTTTTA............ATCCC.AAG...........GtTGGGGGTTCGAGACCCCCCTCGGGCG tRNA-Lys-TTT-1-1 Sc: 80.7 GGAACTTTAGTATAAT.GGTgA.ATGCGTATGACTTTTA............ATCATtAAA...........A.TGTAGGTTCGATTCCTATAAGTTCTA tRNA-Lys-TTT-2-1 Sc: 46.8
Met tRNAs
>>>>>>>..>>>>.............<<<.<.........>>>>..........................................................................<<<..<.........................>>>>>.......<.<<<<.<<<<<<<. GTCTTCATGGCGCAGTT.GGTttA..GCG.CG........TTGGT.CTCATAaacaaatgtttgtgatcagatgaataatctgggcc............................A.TCCA..AAG...................Gt.CGCGAGTTCGAGTC.TCGC.TGAGGACA tRNA-Met-CAT-1-1 Sc: 77.2 GTCTTCATGGCGCAGTT.GGTttA..GCG.CG........TTGGT.CTCATAagcccctgtttgtgatcagatgaataatctgggcc............................A.TCCA..AAG...................Gt.CGCGAGTTCGAGTC.TCGC.TGAGGACA tRNA-Met-CAT-1-2 Sc: 77.2 >>>>>>>..>>>>.............<<<.<.........>>>>>........................................................................<<<<..<.........................>>>>>.......<.<<<<.<<<<<<<. AGCAACATAGCTCAGT..GGA..A..GAG.CG........ACGGG.CTCATA...............................................................A.CCCG..TAG...................Gc.CCCTGGATCGACAC.CAGG.TGTTGCTA tRNA-iMet-CAT-2-1 Sc: 68.0 AGCAATTTGGCGCAGT..GGA..A..GCG.CG........CCGGG.CTCATA...............................................................A.CCCG..GAG...................Gt.CGTACGATCGAAAC.GTAC.AATTGCTA tRNA-iMet-CAT-1-1 Sc: 64.4 >>>>.>>..>>>>.............<<<.<.........>>>>>........................................................................<<<<..<.........................>>>>>.......<.<<<<.<<.<<<<. GCCTAGATAGTTTAAC..GGTt.A..AAA.CA........CCGAC.CTCATA...............................................................T.GTTG..GTA...................A..TAAAAGTTCGATTC.TTTT.TCCAGGCT tRNA-Met-CAT-2-1 Sc: 44.1
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGGCCATAGATTAGCTGGGAGATCGTCAGACTGAAGccttacttcaatcctacggatgcct..ATCTGAAG...........GtCGTGTGTTCGAGTCACACTGGCCGCA tRNA-Phe-GAA-1-1 Sc: 63.4 GCGGCCATAGATTAGCTGGGAGATCGTCAGACTGAAGtaaacttcaatcctacggatgcct...ATCTGAAG...........GtCGTGTGTTCGAGTCACACTGGCCGCA tRNA-Phe-GAA-1-2 Sc: 63.4 GCGGTCATAGATTAGCTGGGAGATCGTCAGACTGAAGtcaacttcaatcctacggatgcct...ATCTGAAG...........GtCGTGTGTTCGAGTCACACTGACCGCA tRNA-Phe-GAA-2-1 Sc: 63.2 GCGGTCATAGATTAGCTGGGAGATCGTCAGACTGAAGtccagggcttcaatcctacggatgcctATCTGAAG...........GtCGTGTGTTCAAGTCACACTGACCGCA tRNA-Phe-GAA-3-1 Sc: 62.0 >>>>>.>..>>>>........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<.<<<<<. GCTCGTATAACTCAATCGGTAGAGTGAAATATTGAAG...........................CTATTTTT...........GtTGTAAGTTCAAGTCTTACTTCGAGCA tRNA-Phe-GAA-5-1 Sc: 53.0 >>>>>.>..>>>>........<<<<.>>>.>..................................<.<<<................>>>>>.......<<<<<<.<<<<<. GCGGTCATAGATTAGCTGGGAGATCGTCATACTGAAGtctaacttcaatcctacggatgcct..ATCTGAAG...........GtCGTGTGTTCGTGTCACACTCACCGCA tRNA-Phe-GAA-4-1 Sc: 35.4
Pro tRNAs
>>>>>>>..>>>.............<<<....>>>>>.......................................<<<<<...................>>>>>.......<<<<<<<<<<<<. GGTCTGGTGGTCTAGT.GGT..A.TGATT...CTCGCTTAGGGacaaccctgatgcacagct.............TGCGAGAG..............GtCCCGGGTTCAATCCCCGGCCAGACCC tRNA-Pro-AGG-1-1 Sc: 67.5 GGTCTGGTGGTCTAGT.GGT..A.TGATT...CTCGCTTAGGGacaaccctgaagcaaagt..............TGCGAGAG..............GtCCCGGGTTCAATCCCCGGCCAGACCC tRNA-Pro-AGG-1-2 Sc: 67.5 GGTCTGGTGGTCTAGT.GGT..A.TGATT...CTCGCTTAGGGagaaccctgatgcactgct.............TGCGAGAG..............GtCCCGGGTTCAATCCCCGGCCAGACCC tRNA-Pro-AGG-1-3 Sc: 67.5 >>>>>>>..>>>.............<<<....>>>>>.......................................<<<<<...................>>>>>.......<<<<<<<<<<<<. GGTCTGGTGGTCTAGT.GGT..A.TGATT...CCTCTTTCGGGctacacccccagttcgttggaattgaata...TAGAGGAG..............GtCCCGGGTTCAATCCCCGGCCAGACCC tRNA-Pro-CGG-1-1 Sc: 61.7 >>>>>>>..>>>.............<<<....>>>>>.......................................<<<<<...................>>>>>.......<<<<<<<<<<<<. GGTCTGATGGTCTAGT.GGT..A.TGATT...CTTGCTTTGGGatttcttattcctatatagtatccttacaaacTGCAAGAG..............GtCCCGGGTTCAATCCCCGGTCAGACCC tRNA-Pro-TGG-1-1 Sc: 67.1 >>>>>>>..>>>>...........<<<<....>.>>>.......................................<<<.<..>............<...>>>>>.......<<<<<<<<<<<<. GCCTTCGTGGCGTAGT.GGTtaA.ACGCTatgGAGCCCTGCCT................................TGGCCCAGCA..........GGG.AGCCGGTTCGAACCCGGCCGGAGGCA tRNA-Pro-TGG-2-1 Sc: 45.1 GCCTTCGTGGCGTAGT.GGTtaA.ACGCTatgGAGCCCTGCCT................................TGGCCCAGCA..........GGG.AGCCGGTTCGAACCCGGCCGGAGGCA tRNA-Pro-TGG-2-2 Sc: 45.1 >>>>>>>..>>>.............<<<....>>>>>.......................................<<<<<...................>>>>>.......<<<<<<<<<<<<. CGGGTTGGAGCCGGATTGGT..A.AGGTG...CTTCGTTTGGG................................ACGGAGAG..T...........A.ACTAGGTTCGATCCCTAGCAACCCGA tRNA-Pro-TGG-3-1 Sc: 39.3 CGGGTTGGAGCCGGATTGGT..A.AGGTG...CTTCGTTTGGG................................ACGGAGAG..T...........A.ACTAGGTTCGATCCCTAGCAACCCGA tRNA-Pro-TGG-3-2 Sc: 39.3
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>...........................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCGGAGTGGCCGAGTGGTccA.AGGCGGTAGACTAGAA....................................................ATCTACT.GGGTTC.......GCCCG.CGCAGGTTCGAGTCCTGT.CTCCGTCG tRNA-Ser-AGA-2-1 Sc: 75.8 >>>>>>>..>>>>..........<<<<.>>>>>...........................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCGGAGTGGCCGAGTGGTt.A.TGGCGATTGACTAGAA....................................................ATCAATT.GGGTTC.......GCCCG.CGCAGGTTCGAGTCCTGT.CTCCGTCG tRNA-Ser-AGA-1-1 Sc: 75.5 >>>>>>>..>>>............<<<.>>>>>...........................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCAGAGTGTCCGAGTGGTccA.AGGAGTTGGATTAGAA....................................................ATCTAAT.GGGTTC.......GCCCG.CGCAGGTTCGAGTCCTGT.CTCTGTCG tRNA-Ser-AGA-3-1 Sc: 66.1 >>>>>>>..>>>............<<<.>>>>>...........................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCAAGATGGCCGAGTGGTt.A.AGGCGAAAGCCTCGAA....................................................AGCTTTT.GGGTTC.......GCCCG.CGTGTGTTCGAATCACAC.TCTTGTCG tRNA-Ser-CGA-1-1 Sc: 75.3 GGCAACATGGCCGAGTGGTt.A.AGGCGAAAGACTCGAAtgttcggcttatcgaatgtcatgca...........................ATCTTTT.GGGTTC.......GCCCG.CGTCAGTTCGAATCTGGC.TGTTGTCG tRNA-Ser-CGA-2-1 Sc: 65.3 >>>>>>>..>>>............<<<.>>>>>...........................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<. GACAGAGTGCCCGAGTGGTt.A.AGGGGAGTGACTTGAAgcgctaggcccgcgatgtgagaaatcgcattaggagtgtcctagcattagatATCACTTGGTTT.........CGGCCtCGCAGGTTCGAATCCTGT.CTCTGTCG tRNA-Ser-TGA-1-1 Sc: 56.3
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>.............<<<.>>>>>.................<<<<<....................>>>>>.......<<<<<.<<<<<<<. GCCCCGTTGGCTCAGTGGT..A..AAGCGTGTCACTAGTA..........ATGACAAG...............AtCACTGGTTCGATTCCAGT.ACGGGGCA tRNA-Thr-AGT-2-1 Sc: 81.9 GCCCCGTTGGCTCAGTGGT..A..AAGCGTGTCACTAGTA..........ATGACAAG...............AtCACTGGTTCGATTCCAGT.ACGGGGCA tRNA-Thr-AGT-2-2 Sc: 81.9 GCCCCGTTGGCTCAGTGGT..A..AAGCGTATCACTAGTA..........ATGATAAG...............AtCACTGGTTCGATTCCAGT.ACGGGGCA tRNA-Thr-AGT-1-1 Sc: 81.0 GCTCCCTTGGCTCAGTGGT..A..AAGCGTGTCACTAGTA..........ATGATAAG...............AtCACTGGTTCGATTCCAGT.AGGGAGCA tRNA-Thr-AGT-3-1 Sc: 75.1 >>>>>>>..>>>>...........<<<<..>>>>.................<<<<....>.>.......<.<....>>>.>.......<.<<<.<<<<<<<. GCCTTTGTAGCGTAGTGGTtaA..ACGCTATAGAGCTTTG..........CTTTAGT.ATAG.......TAGGG.AGCTAGTTTAAACCCGGT.TAAAGGCA tRNA-Thr-AGT-4-1 Sc: 26.7 >>>>.>>..>>>>...........<<<<.>>>>>.................<<<<<....................>>>>>.......<<<<<.<<.<<<<. GCCCTCGTATCACAGT.GT..A..GTGAGTGTCACCCGTA..........ATGACAAG...............CtCGTCTGTTCGATCCAGGC.CGCGGGCA tRNA-Thr-CGT-1-1 Sc: 34.1 >>>>>>>..>>>>...........<<<<.>>>>>.................<<<<<....................>>>>>.......<<<<<.<<<<<<<. GCCGGCATAGCTTAGTGGT..A..GAGCGTTGCACTTGTAtctccacgatATGCAAAG...............GtCGCTTGTTCGAGTCAGGC.TGTTGGCA tRNA-Thr-TGT-1-1 Sc: 73.2
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>............................<<<<................>>>>>.......<<<<<<<<<<<<. GGGGGGCTGGCGCAACGGTA.GCGCGTCGGATTCCAGttcagcttcattacgaaccTCCCGAAG...........GtTACCGGTTCAAATCCGGTGTCCCTCA tRNA-Trp-CCA-1-1 Sc: 56.8 GGGGCCTTATCTCAGCGGTA.GAGAGCCCGATTCCAGtccttggagat........TCCGGGAG...........GtCGTCCGTTCGATCCGGGCAGGCCTCA tRNA-Trp-CCA-2-1 Sc: 49.5
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<. CTCCGGGTAGTCTAGTTGGTttATGGCGTCTGACTGTAAttggtacacaacagctcaATCAGAAT...........GtCGCGTGTTCGAATCACGCCCTGGAGA tRNA-Tyr-GTA-2-1 Sc: 65.3 CTCCGGATAGTCTAGTTGGTttATGGCGTCTGACTGTAAttggcctcatcagttta.ATCAGAAT...........GtCGCGTGTTCGAATCACGCTCTGGAGA tRNA-Tyr-GTA-1-1 Sc: 65.0 >>>>.>>..>>>............<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<.<<<<. CTCCGGGTAGTCTAGTTGGTttATGGCGTCTGACTGTAAttgtctcatcagttga..ATCAGAAT...........GtCGCGTGTTCGAATCACGCCCGGGAGA tRNA-Tyr-GTA-3-1 Sc: 60.2
Val tRNAs
>>>>>>>..>>>.............<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTTCGTGGTCTAGTTGGTc.A.TGATTTCTCGCTAACA..................................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGAAACCA tRNA-Val-AAC-1-1 Sc: 76.4 GGTTTCATGGTCTAGTTGGTc.A.TGATTTCTCGCTAACA..................................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGTGAAACCA tRNA-Val-AAC-2-1 Sc: 76.1 GGTTTCGTGGTCTAGTTGGTc.A.TGATTTCTCGCTAACActgaatcgctcttctagagagcccaggtgtgggtCCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGAAACCA tRNA-Val-AAC-1-2 Sc: 68.2 GGTTTTATGGTCTAGTTGGTc.A.TGATTTCTCGCTAACAacgatttgcttggttc..................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGTAAAACCA tRNA-Val-AAC-3-1 Sc: 67.8 >>>>>>>..>>>>...........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTGAGTAGTGTAGT.GGTc.A.ACATGGTGGCTTCACAtaatcagtgaatg.....................CGCTACAG...........C.CCCGGGTTCGATTCCCGGCTCGACTA tRNA-Val-CAC-1-1 Sc: 53.7 >>.>>>>..>>>.............<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<.<<. GTCCGCATAGCGTAGT.GGTttA.TCGCGCCTGTCTTACActatcctcaggacatgtagga.............CACAGGAG...........GtCCCAGGTTCGATCCCTGGTGCGAACA tRNA-Val-TAC-1-1 Sc: 68.1