Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>............<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGGATGGTTTAGT.GGT.A.TAATACTCCC.TTAGCAagattcatttactggattat..............T.GGGAGTG...........GtCCGGGGTTCGATTCCCCGTTCGTCCA tRNA-Ala-AGC-2-1 Sc: 65.0 GGGCGGATGGTTTAGT.GGT.A.TAATACTCCC.TTAGCAagtttccatgtgatggattctgatc.........T.GGGAGTG...........GtCCGGGGTTCGATTCCCCGTTCGTCCA tRNA-Ala-AGC-2-2 Sc: 64.8 GGGCGGATGGTTTAGT.GGT.A.TAATACTCCC.TTAGCAagtttccgtctacggattcgagat..........T.GGGAGTG...........GtCCGGGGTTCGATTCCCCGTTCGTCCA tRNA-Ala-AGC-2-3 Sc: 64.8 GGGCGGATGGTTTAAT.GGT.A.TAATACTCCC.TTAGCAaggtttattcactgagttgtt.............T.GGGAGTG...........GtTCGGGGTTCGATTCCCCGTTCGTCCA tRNA-Ala-AGC-3-1 Sc: 59.9 >>>>>.>..>>>............<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGCATATGGTTTAAT.GGT.A.TAATACTCCC.TTAGCAaatatcttcataaggatttgtcttatc.......T.GGGAGAG...........GtCCGGGGTTCGATTCCCCGTTTGTCCA tRNA-Ala-AGC-1-1 Sc: 59.8 >>>>>>>..>>>>..........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTGGGTAGCTCAAT.GGT.A.GAGCGTCTGAcTTCGCAgcgaaccagtatcattatagtatcattaccccggAgTCAGAAG...........G.TGTAGGTTCGAATCCTGCCCCGGCTA tRNA-Ala-CGC-1-1 Sc: 61.7 >>>>>>>..>>>............<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGAAATAGTGTAGG.GGTtA.TCGCGTCTGC.TTTGCA..................................T.GTAGAAG...........GtCCGGGGTTCAAATCCCCGTTTCTCCA tRNA-Ala-TGC-1-1 Sc: 64.5 GGGGAAATAGTGTAGG.GGTtA.TCACGTTTGC.TTTGCA..................................T.GTAGAAG...........GtCCGGGGTTCAAATCCCTGTTTCTCCA tRNA-Ala-TGC-2-1 Sc: 61.0 >>>>>>>..>>>>..........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGATATAGTTTAATTGGT.A.AAACTGCGAT.TTTGCA..................................T.ATCGTTA...........A.TTCGGGATCGACTCCTGATATCTCCA tRNA-Ala-TGC-3-1 Sc: 36.4
Arg tRNAs
>>>>>.>..>>>>..........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGCCGTGTAGCTCAATGGC..A.GAGCGTCTGACTACGAttaacaacagttaattctctgta..............ATCAGAAG...........GtCGCAGGTTCGACCCCTGTCTCGGTCA tRNA-Arg-ACG-1-1 Sc: 69.4 GGCCGTGTAGCTCAATGGC..A.GAGCGTCTGACTACGAtcatcattattcagtatcagta...............ATCAGAAG...........GtCGCAGGTTCGACCCCTGTCTCGGTCA tRNA-Arg-ACG-1-2 Sc: 69.4 GGCCGTGTAGCTCAATGGC..A.GAGCGTCTGACTACGAtcaaggagtatctagcgatactttgtgtgtg......ATCAGAAG...........GtCGCAGGTTCGACCCCTGTCTCGGTCA tRNA-Arg-ACG-1-3 Sc: 69.1 GGCCGTGTAGCTCAATGGC..A.GAGCGTCTGACTACGAttaagtattattataatatcattatcccgta......ATCAGAAG...........GtCGCAGGTTCGACCCCTGTCTCGGTCA tRNA-Arg-ACG-1-4 Sc: 69.1 GGCCGTGTAGCTCAATGGC..A.GAGCGTCTGACTACGAatagtatctacttagcgctgatacttgttatgtg...ATCAGAAG...........GtCGCAGGTTCGACCCCTGTCTCGGTCA tRNA-Arg-ACG-1-5 Sc: 69.0 >>>>>>>..>>>>..........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCGGGTAGCTCAATGGT..A.GAGTGTCTGACTACGCagcgaaccagtatccttatagtatccttagcccgta.GTCAGAAG...........GtTGTAGGTTCGAATCCTGCCCCGGCTG tRNA-Arg-ACG-3-1 Sc: 58.4 GGCCGGGTAGCTCAATGGC..A.GAGCGTCTGACTACGCagcgaaccagtatccttatagtattattacccccgtaGTCAGAAG...........GtTGTAGGTTCGAATCCTGCCCTGGCTG tRNA-Arg-ACG-2-1 Sc: 55.4 GGCCATGTAGCTCACTGGT..A.GAGCGTCTGACTACGTagcgcagtatccttatagtatccttaccccgta....GTCAGAAG...........GtAGCGGGTTCGATTCCTGCCATGGCTA tRNA-Arg-ACG-4-1 Sc: 48.8 >>>>>>>..>>>>..........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTGGGTAGCTCAATGGT..A.GAGCGTCTGACTCCGAagcgatccagtatcattaaagtatcattatcccgga.GTCAGAAG...........G.TGTAGGTTCGAGTCCTGCCCCGGCTA tRNA-Arg-CCG-1-1 Sc: 64.8 GGTCTCGTAGATCAATGGCttA.GATCGCAGCTTTCCGG.....................................TGGCTGAG...........GtTCCAGGTTCGAGTCCTGGCGGGATCG tRNA-Arg-CCG-2-1 Sc: 52.2 >>>>>>>..>>>>..........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCGCGTGGCCTAATGGCt.A.AGGCGCTAGATTTCGGttatctgtccgactt......................CTCTAGAG...........AtTCCAGGTTCGACTCCTGGCGTGGTCG tRNA-Arg-TCG-1-1 Sc: 59.2 GGCCGCGTGGCCTAATGGCt.A.AGGCGCTAGATTTCGGttaaagcgagccaccgagct.................CTCTAGAG...........AtTCCAGGTTCGACTCCTGGCGTGGTCG tRNA-Arg-TCG-1-2 Sc: 59.0 >>>>>>>..>>>>..........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCGTGCTGGCGCAATGGT..A.GCGCGTAGTCCTCCTA.....................................AGACTAAG...........GtTCAGGGTTCGAGTCCCTGGTACGTCG tRNA-Arg-CCT-1-1 Sc: 70.9 >>>>>>>..>>>>..........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCCGTGGCCTAATGGCt.A.AGGCGTAAGACTTCTA.....................................ATCTTAAG...........AcTGCGGGTTCGAGTCCCGCCGGGGGTT tRNA-Arg-TCT-2-1 Sc: 74.2 GCCCCCGTGGCCTAATGGTt.A.AGGCGTGAGCCTTCTAtcagggcacaccagtccagtatccga...........AGCTCAAC...........AtTGCGGGTTCGAGTCCCGCCGGGGGTT tRNA-Arg-TCT-1-1 Sc: 66.4 GCCTCATTAGCTCAATGGT..A.GAGCATGATACTTCTA.....................................ATATCAGG...........A.CCTTAGTTCGACTCTGAGATGAGGTA tRNA-Arg-TCT-3-1 Sc: 63.3
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCTCCGTGGCGCAATTGGCtAGCGCGTCTGACTGTTA............................................................ATCAGGAG...........GtTGAAAGTTCGAGCCTTTCCGGGGGAG tRNA-Asn-GTT-1-1 Sc: 72.6 TCCTCCGTGGCGCAATTGGCtAGCGCGTCTGACTGTTA............................................................ATCAGGAG...........GtTGAAAGTTCGAGCCTTTCCGGGGGAG tRNA-Asn-GTT-1-2 Sc: 72.6 TCCTCCGTGGCGCAATTGGCtAGCGCGTCTGACTGTTA............................................................ATCAGGAG...........GtTGAAAGTTCAAGCCTTTCCGGGGGAG tRNA-Asn-GTT-2-1 Sc: 71.5 >>>>>>>..>>>>.........<<<<.>.>>.....................................................................<<.<................>>>>>.......<<<<<<<<<<<<. TCCTCCGTGGCGCAATTGGCtAGCGCGTCTGACTGTTAatcaggaggtgagttagagaaccgataacttgtgatatgtggaaatatttgctaatagatTATAAAAG...........GtTGAAAGTTCGAGCCTTTCCGGGGGAG tRNA-Asn-GTT-3-1 Sc: 49.2
Asp tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. TCTTCCGTAGTATAGT..GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-1 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-2 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-3 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-4 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATGCAAGCTTGTCACGCTTGAG...........A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-5 Sc: 69.5 >>>>>>>...>>>...........<<<..>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GAATTAGTAACTTAATTaGGT.A.AAGGATTTCCCTGTCACGGAAATA...........GaTGTCGGTTCGATTCTGATCTAATTCG tRNA-Asp-GTC-2-1 Sc: 31.2
Cys tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GTCCGTGTGGTCTAGTGGTtA.TGATGGCAGATTGCAAATCTGTAG...........AtCCCTGGTTCAAATCCGGGCACGGACT tRNA-Cys-GCA-2-1 Sc: 76.1 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GTCCGTATGGTCTAGTGGTtA.GGATGGCAGATTGCAAATCTGTAG...........AtCCCTGGTTCAAATCCGGGTACGGACT tRNA-Cys-GCA-1-1 Sc: 75.7
Gln tRNAs
>>>>>>>..>>>...........<<<.>>>>>...........................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTCCATGGTCTAACGGTtA.TGACTGCGGATTCTGA....................TTCCGCCA...........GCGAGGGTTCGACTCCCTCTGGAACCT tRNA-Gln-CTG-1-1 Sc: 58.7 GGTTCCATGGTCTAACGGTcA.TGACTGCGGATTCTGA....................TTCCGCCA...........GCGAGGGTTCGACTCCCTCTGGAACCT tRNA-Gln-CTG-2-1 Sc: 58.7 >>>>>>>..>>>...........<<<.>>>>>...........................<<<<<...............>.>>>.......<<<.<<<<<<<<. GGTTCCATGGTCTAACGGTtA.TGACTGCGGATTCTGA....................TTCCGCCA...........GCGAGGGTTCGACTCCCCCTGGAACCT tRNA-Gln-CTG-3-1 Sc: 53.0 >>>>>>>..>>>>.........<<<<.>>>>>...........................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTCCGGTGGTGTAAAGGCtA.GCATTCTAGACTTTGActttggcattggctcatttaATCTGGCG...........ATCCGGGTTCGAATCCCGGCCGGACCT tRNA-Gln-TTG-1-1 Sc: 53.2
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...............................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCA........................CCGAGCAG...........C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-2 Sc: 56.5 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCA........................CCGAGCAG...........C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-3 Sc: 56.5 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCAagtatcattataaagtatttgttaCCGAGCAG...........C.CCTGGGTTCGATTCCCAGTACCGGAG tRNA-Glu-CTC-2-1 Sc: 51.3 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCAattatccttatcgtgtattgtta.CCGAGCAG...........C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-1 Sc: 48.8 >>>>>>>..>>>...........<<<.>>>>>...............................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCGATGTGGTGTAGTGGCtA.TCATACTGCGCTTTCAaggtctcttggaagct........CCGCAGGG...........A.TCGGGGTTCGATTCCCCGCATCGGAG tRNA-Glu-TTC-1-1 Sc: 56.1 >>>>>>>..>>>...........<<<.>>>>.................................<<<<................>>>>>.......<<<<<<<<<<<<. GGATTAGTAGTCAAGTGGTtA.CGACATAGCTCTTTCG........................ATGCTACC...........AcCGCAGGTTCGAATCCTGCCTAGTCTA tRNA-Glu-TTC-3-1 Sc: 53.5 >>>>>>>..>>>...........<<<.>>>>>...............................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCGATGTGGTGTAACGGCtA.TCATACTGCGCTTTCAagttcccagatttggaagtg....CCGCAGGG...........A.CCGGGGTTCGACTCCCCGCATCGGAG tRNA-Glu-TTC-2-1 Sc: 50.6
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTGATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtcagcaacg..TCGGGGAG...........CCCTGGGTTCGATTCCCAGATCACGCA tRNA-Gly-GCC-2-1 Sc: 58.9 GCGTGATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAttcgagcagtgTCGGGGAG...........CCCTGGGTTCGATTCCCAGATCACGCA tRNA-Gly-GCC-2-2 Sc: 58.9 GCGTGATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtccaagcagcgTCGGGGAG...........CCCTGGGTTCGATTCCCAGATCACGCA tRNA-Gly-GCC-4-1 Sc: 58.9 GCGTAATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtccgggcagcgTCGGGGAG...........CCCTGGGTTCGATTCCCAGATTACGCA tRNA-Gly-GCC-1-1 Sc: 58.1 GCGTAATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtccgagcagcgTCGGGGAG...........CCCTGGGTTCGATTCCCAGATTACGCA tRNA-Gly-GCC-3-1 Sc: 58.1 GCGTAATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAttcgagcaacgTCGGGGAG...........CCCTGGGTTCGATTCCCAGATTACGCA tRNA-Gly-GCC-3-2 Sc: 58.1 GCGTAATTGGTTTAGTGGT.A.AAATTCTCCGTTGCCAtccgagcaacgTCGGGGAG...........CCCTGGGTTCGATTCCCAGATTACGCA tRNA-Gly-GCC-3-3 Sc: 58.1 >>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTGAATAGTGTAGCGGTtA.GCATGCATGCTTCCCA...........AGCATGCG...........ACCCGGGTTCGAGTCCCGGTTCACGCA tRNA-Gly-CCC-1-1 Sc: 71.3 >>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGGCCATGGTGTAACGGTtA.GCATGGCTGATTTCCA...........TTCAGCCG...........ATTCGGGTTCGACTCCCGATGGCCGCA tRNA-Gly-TCC-1-1 Sc: 57.2 >>>>>>>..>>>>.........<<<<..>>>>..................<<<<................>>>>>.......<<<<<<<<<<<<. ACGGATATAGGTTAATGGT.A.GACTTTCTGATTTCCA...........CTCAGCGT...........GTGTCAGTTCAAATCTGACTATCCGTA tRNA-Gly-TCC-2-1 Sc: 41.0
His tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGCAGTCGTCTAGG.GGTaA.GGACACCAGTTTGTGGacccagcgaaa......CACTGGAA...........A.CCGAGGTTCGAGTCCTCGCTGCGGCA tRNA-His-GTG-1-2 Sc: 53.8 GCCGCAGTCGTCTAGG.GGTaA.GGACACCAGTTTGTGGtttggtagcagat....CACTGGAA...........A.CCGAGGTTCGAGTCCTCGCTGCGGCA tRNA-His-GTG-1-1 Sc: 53.6 GCCGCAGTCGTCTAGG.GGTaA.GGACACCAGTTTGTGGttcgtcgagcacgaaatCACTGGAA...........A.CCGAGGTTCGAGTCCTCGCTGCGGCA tRNA-His-GTG-1-3 Sc: 53.4 >>>>.>>..>>>>..........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<.<<<<. GTGGTTATAGTTCAATCGGT.A.GAGCAACTGTATGTGG.................CACAGTAA...........GtTCTTGGTTCAAATCCAAGTATCCACC tRNA-His-GTG-2-1 Sc: 43.7
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCCGTAGCTCAGTTGGTtA.GAGCTTCGTACTAATAaacgttagtg.......................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-1 Sc: 77.7 GCTTCCGTAGCTCAGTTGGTtA.GAGCTTCGTACTAATAaacgttagtg.......................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-2 Sc: 77.7 GCTTCCGTAGCTCAGTTGGTtA.GAGCTTCGTACTAATAaatgttagtg.......................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-3 Sc: 77.7 GCTTCCGTAGCTCAGTTGGTtA.GAGCTTCGTACTAATAaacgttagtg.......................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-4 Sc: 77.7 GCTTCCGTAGCTCAGTTGGTtA.GAGCTTCGTACTAATAaacgttagtg.......................ATGCGGAG...........GcCGCAGGTTCAAGCCCTGCCGGGAGCA tRNA-Ile-AAT-1-5 Sc: 77.7 >>>>>>>..>>>>..........<<<<.>>>>..........................................<<<<................>>>>>.......<<<<<<<<<<<<. GTTCCCGTAGCGGAGT.GGTtA.CCGCGTGACTCTTATAgtctaaggattattctttggttctatggtagaaATGTCAAG...........GtCCGGGGTTCGACCCCCCGCGGGAACA tRNA-Ile-TAT-1-1 Sc: 63.3
Leu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>..........................................<<<<<..>>...............<<....>>>>>.......<<<<<.<<<<<<<. GGTGAGATGGCCGAGTTGGTt.A.TGGCGTCAGGTTAAGGttaccttaacaccagct..................TCCTGATGGAGC...........AATCCt.CCTGGGTTCGAGTCCCAG.TCTCATCA tRNA-Leu-AAG-1-2 Sc: 60.1 GGTGAGATGGCCGAGTTGGTt.A.TGGCGTCAGGTTAAGGttaccttaacaccctgtt.................TCCTGATGGAGC...........AATCCt.CCTGGGTTCGAGTCCCAG.TCTCATCA tRNA-Leu-AAG-1-3 Sc: 60.1 GGTGAGATGGCCGAGTTGGTt.A.TGGCGTCAGGTTAAGGttaccttaacaccagct..................TCCTGATGGAGC...........AATCCt.CCTGGGTTCGAGTCCCAG.TCTCATCA tRNA-Leu-AAG-1-4 Sc: 60.1 GGTGAGATGGCCGAGTTGGTt.A.TGGCGTCAGGTTAAGGtcaccttaattactaccagtt..............TCCTGATGGAGC...........AATCCt.CCTGGGTTCGAGTCCCAG.TCTCATCA tRNA-Leu-AAG-1-1 Sc: 59.9 >>>>>>>..>>>.............<<<.>>>>>..........................................<<<<<..>>>.>.........<.<<<....>>>>>.......<<<<<.<<<<<<<. GGCACTTTGGCCGAGT.GGTctA.AGGCGCCGTGTTCAGGttgagtcgattcgttcgactgggcttat.......TCGCGGT.CTAGT.........AATAGG..CGAGGGTTCGAATCCCTC.AGGTGTCA tRNA-Leu-CAG-1-2 Sc: 58.7 GGCACTTTGGCCGAGT.GGTctA.AGGCGCCGTGTTCAGGtgttccaccggtaccatccggttgtccctat....TCGCGGT.CTAGT.........AATAGG..CGAGGGTTCGAATCCCTC.AGGTGTCA tRNA-Leu-CAG-1-1 Sc: 58.6 >>>>>>>..>>>.............<<<.>>>>>..........................................<<<<<..>>>>...........<<<<....>>>>>.......<<<<<.<<<<<<<. GCGAGTCTGGCCGAGT.GGTt.A.AGGCGTTGTGTTTAGGacatacccaccagggtatacgcttgaa........CCGCAAT.GGGC.ATT.......GCCCG..CGTAGGTTCGATCCCTAC.GGCTCGCA tRNA-Leu-TAG-1-1 Sc: 70.1 >>>>>>>..>>>>...........<<<<.>>>>............................................<<<<..>>>.............<<<....>>>>>.......<<<<<.<<<<<<<. GGCAGAATGGCCGAGT.GGTctA.TGGCGACGGTCTCAAGcacagtatatgtactttcgcctgcgaaaagcagcgTTCCGTT.CACGA.........AAGTGG..CCGGGGTTCGAATCCCCG.TTCTGTCA tRNA-Leu-CAA-1-1 Sc: 53.1 GGCAGAATGGCCGAGT.GGTctA.TGGCGACGGTCTCAAGcacacatatgtactttcgcttgcgaaaagcagcg.TTCCGTT.CACGA.........AAGTGG..CCGGGGTTCGAATCCCCG.TTCTGTCA tRNA-Leu-CAA-1-2 Sc: 53.1 >>>>>>>..>>>.............<<<.>>>>>..........................................<<<<<..>>>.............<<<....>>>>>.......<<<<<.<<<<<<<. ACCAAGATGGCCGAGT.GGTttA.AGGCGGTAGATTTAAGtgttttttggcataat...................CTCTACT.ATCGA.........AAGATG..CCTGGGTTCGAACCCCAG.TCTTGGTA tRNA-Leu-TAA-1-1 Sc: 61.8 >>>>>>>..>>>.............<<<.>>>>>..........................................<<<<<...>>.............<<.....>>>>>.......<<<<<.<<<<<<<. ACCAAGATGGCCGAGG.GGTt.A.AGGCGGTGGACTTAAGccatttttggcgcaat...................TTCCACT.ATCG...........AGAGAttCCTGGGTTCGAACCCCAG.TCTTGGTA tRNA-Leu-TAA-2-1 Sc: 53.7 >>>>>>>..>>>.............<<<.>>>>>..........................................<<<<<..>>>.............<<<....>>>>>.......<<<<<.<<<<<<<. GTCCGAATGGTGAAATTGGCa.A.ACACAACAAACTTAAG...................................CTTTGTAGACT..TAT........AGTCt.TGAAGGTTCAAGTCCTTC.TTCGGATA tRNA-Leu-TAA-3-1 Sc: 44.0
Lys tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...................<<<<.<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAgagtacacgaa.ATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-1-2 Sc: 78.3 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAcgagtacacgaaATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-1-1 Sc: 78.2 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAcgagtacacgaaATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-1-3 Sc: 78.2 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAcgagtacacgaaATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-1-4 Sc: 78.2 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAcgagtacacgaaATCTC.AAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-1-5 Sc: 78.2 >>>>>>>..>>>>..........<<<<.>>>>>...................<<<<.<................>>>>>.......<<<<<<<<<<<<. GCCCGGGTAGCTCAAT.GGCtA.GAGCGTGGGACTTTTA............ATCCC.AAG...........GtTGGGGGTTCGAGACCCCCCTCGGGCG tRNA-Lys-TTT-1-1 Sc: 80.7 GGAACTTTAGTATAAT.GGTgA.ATGCGTATGACTTTTA............ATCATtAAA...........A.TGTAGGTTCGATTCCTACAAGTTCTA tRNA-Lys-TTT-2-1 Sc: 50.4
Met tRNAs
>>>>>>>..>>>>............<<<<.>>>>...........................................................................<<<.<.........................>>>>>.......<<<<<.<<<<<<<. GTCTTCATGGCGCAGTT.GGTttA.GCGCGTTGGT.CTCATAcactgttgtctatgatcagatgaataatctgggcc............................A..TCCA.AAG...................Gt.CGCGAGTTCGAGTCTCGC.TGAGGACA tRNA-Met-CAT-1-1 Sc: 77.2 GTCTTCATGGCGCAGTT.GGTttA.GCGCGTTGGT.CTCATAagcccttgtttatgatcagatgaaatatctgggcc............................A..TCCA.AAG...................Gt.CGCGAGTTCGAGTCTCGC.TGAGGACA tRNA-Met-CAT-1-2 Sc: 77.2 >>>>>>>..>>>>............<<<<.>>>>>.........................................................................<<<<.<.........................>>>>>.......<<<<<.<<<<<<<. AGCAACATAGCTCAGT..GGA..A.GAGCGACGGG.CTCATA...............................................................A..CCCG.TAG...................Gt.CCCTGGATCGACACCAGG.TGTTGCTA tRNA-iMet-CAT-1-1 Sc: 68.0 >>>>.>>..>>>>............<<<<.>>>>>.........................................................................<<<<.<.........................>>>>>.......<<<<<.<<.<<<<. GCCTAGATAGTTTAAC..GGTt.A.AAACACCGAC.CTCATA...............................................................T..GTTG.GTA...................A..TAAAAGTTCGATTCTTTT.TCCAGGCT tRNA-Met-CAT-3-1 Sc: 44.1 >>>>>>>..>>>>............<<<<.>>>>>.........................................................................<<<<.<.........................>>>>>.......<<<<<.<<<<<<<. AGGGTTATAGCTTAATA.GGT..A.AAGCATACTG.CTCATA...............................................................A..CAGT.AC......TT............A..TAAGTGTTCAAGTCACTT.TAGCCCTA tRNA-Met-CAT-2-1 Sc: 34.8
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGGCCATAGATTAGCTGGGAGATCGTCAGACTGAAGccttacttcaatcctacggatgcct.ATCTGAAG...........GtCGTGTGTTCGAGTCACACTGGCCGCA tRNA-Phe-GAA-1-1 Sc: 63.4 GCGGCCATAGATTAGCTGGGAGATCGTCAGACTGAAGttaacttcaatcctacggatgcct..ATCTGAAG...........GtCGTGTGTTCGAGTCACACTGGCCGCA tRNA-Phe-GAA-1-2 Sc: 63.4 GCGGTCATAGATTAGCTGGGAGATCGTCAGACTGAAGtctaacttcaatcctacggatgcct.ATCTGAAG...........GtCGTGTGTTCGAGTCACACTGACCGCA tRNA-Phe-GAA-2-1 Sc: 63.1 GCGGTCATAGATTAGCTGGGAGATCGTCAGACTGAAGtccaggcttcaatcctacggatgcctATCTGAAG...........GtCGTGTGTTCAAGTCACACTGACCGCA tRNA-Phe-GAA-3-1 Sc: 62.0 GCGGTCATAGATTAGCTGGGAGATCGTCAGACTGAAGtccaggcttcaatcctacggatgcctATCTGAAG...........GtCGTGTGTTCAAGTCACACTGACCGCA tRNA-Phe-GAA-3-2 Sc: 62.0 >>>>>.>..>>>>........<<<<.>>>>>.................................<<<<<................>>>>>.......<<<<<<.<<<<<. GCTCGTGAAGCTCAATTGGTCGAGCAGAACGTTGAAG..........................TTGTTTTG...........GtTGTAAGTTCAAGTCTTACCTCGGGCA tRNA-Phe-GAA-5-1 Sc: 43.1 .....>>..>>>>........<<<<.>>>>>.................................<<<<<................>>>>>.......<<<<<<<...... GCGGTCATAGATTAGCTGGGAGATCGTCAGACTGAAGtcaacttcaatcctacggatgcct..ATCTGAAG...........GtCGTGTGTTCGAGTCACACTGNNNNNN tRNA-Phe-GAA-4-1 Sc: 38.4
Pro tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GGTCTGGTGGTCTAGT.GGTA.TGATTCTCGCTTAGGGataaccctgaagcaaagt..............TGCGAGAG............GtCCCGGGTTCAATCCCCGGCCAGACCC tRNA-Pro-AGG-1-1 Sc: 67.5 GGTCTGGTGGTCTAGT.GGTA.TGATTCTCGCTTAGGGaaaaccctaatgcattgct.............TGCGAGAG............GtCCCGGGTTCAATCCCCGGCCAGACCC tRNA-Pro-AGG-1-2 Sc: 67.5 GGTCTGGTGGTCTAGT.GGTA.TGATTCTCGCTTAGGGataaccctgatgcatagct.............TGCGAGAG............GtCCCGGGTTCAATCCCCGGCCAGACCC tRNA-Pro-AGG-1-3 Sc: 67.5 >>>>>>>..>>>...........<<<.>>>>>.......................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GGTCTGGTGGTCTAGT.GGTA.TGATTCCTCTTTCGGGttgcttccccaattcgttagaattgaata...TAGAGGAG............GtCCCGGGTTCAATCCCCGGCCAGACCC tRNA-Pro-CGG-1-1 Sc: 61.7 >>>>>>>..>>>...........<<<.>>>>>.......................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GGTCTGATGGTCTAGT.GGTA.TGATTCTTGCTTTGGGatttcttattcctaaatagtatcctcacaaacTGCAAGAG............GtCCCGGGTTCAATCCCCGGTCAGACCC tRNA-Pro-TGG-1-1 Sc: 67.1 CGGGTTGGAGCCGGATTGGTA.AGGCGCTTCGTTTGGG................................ACGGAGAGT...........A.ACTAGGTTCGATCCCTAGCAACCCGA tRNA-Pro-TGG-2-1 Sc: 42.1
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...........................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCGGAGTGGCCGAGTGGTt.A.TGGCGATTGACTAGAA....................................................ATCAATT.GGGTTC.......GCCCG.CGCAGGTTCGAGTCCTGT.CTCCGTCG tRNA-Ser-AGA-1-1 Sc: 75.5 GGCGGAGTGGCCGAGTGGTt.A.TGGCGATTGACTAGAA....................................................ATCAATT.GGGTTC.......GCCCG.CGCAGGTTCGAGTCCTGT.CTCCGTCG tRNA-Ser-AGA-1-2 Sc: 75.5 >>>>>>>..>>>............<<<.>>>>>...........................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCAGAGTGTCCGAGTGGTccA.AGGAGTTAGACTAGAA....................................................ATCTAAT.GGGTTC.......GCCCG.CGCAGGTTCGAGTCCTGT.CTCTGTCG tRNA-Ser-AGA-2-1 Sc: 73.5 >>>>>>>..>>>............<<<.>>>>>...........................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCAAGATGGCCGAGTGGTt.A.AGGCGAAAGCCTCGAA....................................................AGCTTTT.GGGTTC.......GCCCG.CGTGTGTTCGAATCACAC.TCTTGTCG tRNA-Ser-CGA-1-1 Sc: 75.3 GGCAACATGGCCGAGTGGTt.A.AGGCGAAAGACTCGAAtcttagcacataagaaagttg...............................ATCTTTT.GGGTTC.......GCCCG.CGTCAGTTCGAATCTGGC.TGTTGTCG tRNA-Ser-CGA-2-1 Sc: 65.5 >>>>>>>..>>>............<<<.>>>>>...........................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<. GACAGAGTGCCCGAGTGGTt.A.AGGGGAGTGACTTGAAgcgctaggcctggagtgcgagaaatcgtatgaagaaccgcctagcaatagatATCACTTGGTTT.........CGGCCtCGCAGGTTCGAATCCTGT.CTCTGTCG tRNA-Ser-TGA-1-1 Sc: 56.3 >>>>>>>..>>>>..........<<<<.>>>>>...........................................................<<<<<......................>>>>>.......<<<<<.<<<<<<<. GGCCGCGTAGCTCAATGGT..A.GAGCGTCTGACTACTTagcgaagtattcttaaagtatccttatcccgta...................GTCAGAAG.................GtAGCGGGTTCGATTCCTGC.CGCGGCTA tRNA-Ser-ACT-1-1 Sc: 56.4 >>>>>>>..>>>............<<<.>>>>>...........................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GACACTTTGGCCGAGTGGTt.A.AGGCGGTGCCCTGCTA....................................................AGGCATT.ACATTC.......GTGTG.CGTAGGTTCGAATCCTGC.AGGTGTCG tRNA-Ser-GCT-2-1 Sc: 66.7 GACACTTTGGCCGAGTGGTt.A.AGGCGGTGCCCTGCTA....................................................AGGCATT.ACATTC.......GTGTG.CGTAGGTTCGAATCCTGC.AGGTGTCG tRNA-Ser-GCT-2-2 Sc: 66.7 GACACTTTGGCCGAGTGGTt.A.AGGCGATGCCCTGCTAcggcctgagaacaggcgtgttgcaca..........................AGGCATT.ACATTC.......GTGTG.CGCAGGTTCGAATCCTGC.AGGTGTCG tRNA-Ser-GCT-1-1 Sc: 61.9
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>..........<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCGTTGGCTCAGTGGTA.AAGCGTGTCACTAGTA.................ATGACAAG...........AtCACTGGTTCGATTCCAGTACGGGGCA tRNA-Thr-AGT-2-1 Sc: 81.9 GCCCCGTTGGCTCAGTGGTA.AAGCGTGTCACTAGTA.................ATGACAAG...........AtCACTGGTTCGATTCCAGTACGGGGCA tRNA-Thr-AGT-2-2 Sc: 81.9 GCCCCGTTGGCTCAGTGGTA.AAGCGTGTCACTAGTA.................ATGACAAG...........AtCACTGGTTCGATTCCAGTACGGGGCA tRNA-Thr-AGT-2-3 Sc: 81.9 >>>>>>>..>>>>........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCCTTGGCTTAGTGGTA.AAGCGTATCACTAGTA.................ATGATAAG...........AtCACTGGTTCGATTCCAGTAGGGAGCA tRNA-Thr-AGT-1-1 Sc: 79.2 >>>>.>>..>>>>........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<.<<<<. GCCCTCGTAGCACAGTGGTA.GTGCGCGTCACTCGTA.................ATGACGAG...........GtCGTCTGTTCGATCCAGGCCGCGGGCA tRNA-Thr-CGT-1-1 Sc: 69.9 GCCCTCGTATCACAGTGGTA.GTGAGTGTCACTCGTA.................ATGACAAG...........GtCGTCTGTTCGATCCAGGCCGCGGGCA tRNA-Thr-CGT-2-1 Sc: 64.2 >>>>>>>..>>>>........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGGCATAGCTTAGTGGTA.GAGCGTTGCACTTGTAtctaatatctccacgatATGCAAAG...........GtCGCTTGTTCGAGTCAGGCTGTTGGCA tRNA-Thr-TGT-1-1 Sc: 72.9 >>>>>>>..>>>>........<<<<.>>>>..........................<<<<................>>>>>.......<<<<<<<<<<<<. GCCTGATTAGCATAAAAGTA.ATGCAATTGTTTTGTA.................ATCAATAG...........A.AGCAAGTGCGATACTTGCATTGGGCT tRNA-Thr-TGT-2-1 Sc: 30.4
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>............................<<<<................>>>>>.......<<<<<<<<<<<<. GGGGGGCTGGCGCAACGGTA.GCGCGTCGGATTCCAGttcagcttcaacatgagctTCCCGAAG...........GtTACCGGTTCAAATCCGGTGTCCCTCA tRNA-Trp-CCA-1-1 Sc: 56.7 GGGGCCTTATCTCAGCGGTA.GAGAGCCCGATTCCAGtgcttggagat........TCCGGGAG...........GtCGTCCGTTCGATCCGGGCAGGCCTCA tRNA-Trp-CCA-2-1 Sc: 49.5
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. CTCCGGGTAGTCTAGTTGGTttATGGCGTCTGACTGTAAgagaacagctca....ATCAGAAT...........GtCGCGTGTTCGAATCACGCCCTGGAGA tRNA-Tyr-GTA-1-1 Sc: 65.5 CTCCGGGTAGTCTAGTTGGTttATGGCGTCTGACTGTAAgatttatagttt....ATCAGAAT...........GtCGCGTGTTCGAATCACGCCCTGGAGA tRNA-Tyr-GTA-1-2 Sc: 65.5 >>>>.>>..>>>............<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<.<<<<. CTCCGGGTAGTCTAGTTGGTttATGGCGTCTGACTGTAAttgtctcatcagttgaATCAGAAT...........GtCGCGTGTTCGAATCACGCCCGGGAGA tRNA-Tyr-GTA-2-1 Sc: 60.2
Val tRNAs
>>>>>>>..>>>.............<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTTCGTGGTCTAGTTGGTc.A.TGATTTCTCGCTAACA....................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGAAACCA tRNA-Val-AAC-1-1 Sc: 76.4 GGTTTCGTGGTCTAGTTGGTc.A.TGATTTCTCGCTAACA....................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGAAACCA tRNA-Val-AAC-1-2 Sc: 76.4 GGTTTCGTGGTCTAGTTGGTc.A.TGATTTCTCGCTAACA....................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGAAACCA tRNA-Val-AAC-1-3 Sc: 76.4 GGTTTCGTGGTCTAGTTGGTc.A.TGATTTCTCGCTAACA....................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGAAACCA tRNA-Val-AAC-1-4 Sc: 76.4 >>>>>>>..>>>>...........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCTATAGCTCAAC.GGT..A.GAGCATATAATTAACA....................GTTATATG...........A.TAGACGTTCGATTCGTCTTAGGGGCT tRNA-Val-AAC-2-1 Sc: 51.6 >>>>>>>..>>>>...........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTGAGTAGTGTAGT.GGTc.A.ACATGGTGGCTTCACAacagtgaatg..........CGCTACAG...........C.CCCGGGTTCGATTCCCGGCTCGACTA tRNA-Val-CAC-1-1 Sc: 53.8 >>>>>>>..>>>.............<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<. GTCCGTATAGTGTAGT.GGTttA.TCACGCTTGTCTTACAaatatctcggtattataggaCACAAGAG...........GtCCCAGGTTCGATCCCTGGTGTGGACA tRNA-Val-TAC-1-1 Sc: 70.8 >>>.>>>..>>>>...........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<.<<<. GAGAAATTAGTTCAATTGGC..A.GAACGTTTGTTTTACA....................CACAAAAT...........GcTAAAGGTTCAAGTCCTTTATTGCTCA tRNA-Val-TAC-2-1 Sc: 48.7