tRNA Gene Summary

Overview
High confidence set 321
tRNAs decoding standard 20 AA 314
Selenocysteine tRNAs (TCA) 7
Notable atypical predictions  
Anticodon/isotype mismatch 1
Unexpected anticodons 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 1917
Secondary filter (low feature scores, possible rep. element) 145

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 24)
Arg TCT
4
Leu CAA
7
Ile TAT
5
Tyr GTA
8
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
11
GGC
 
CGC
4
TGC
5
20
GlyACC
 
GCC
13
CCC
4
TCC
8
25
ProAGG
6
GGG
 
CGG
1
TGG
4
11
ThrAGT
8
GGT
 
CGT
3
TGT
6
17
ValAAC
7
GAC
 
CAC
6
TAC
1
14
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
7
GGA
 
CGA
2
TGA
4
ACT
 
GCT
10
 
 
 
 
23
ArgACG
7
GCG
 
CCG
2
TCG
4
 
 
 
 
CCT
3
TCT
6
22
LeuAAG
5
GAG
 
CAG
5
TAG
3
 
 
 
 
CAA
7
TAA
3
23
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
8
 
 
 
 
8
AsnATT
 
GTT
14
 
 
 
 
14
Lys 
 
 
 
CTT
14
TTT
10
24
AspATC
 
GTC
11
 
 
 
 
11
Glu 
 
 
 
CTC
6
TTC
11
17
HisATG
 
GTG
6
 
 
 
 
6
Gln 
 
 
 
CTG
7
TTG
2
9
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
6
GAT
 
CAT
 
TAT
5
11
iMet/Met 
 
 
 
CAT
7/6
 
 
13
TyrATA
 
GTA
8
 
 
 
 
8
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
30
 
 
 
 
30
Trp 
 
 
 
CCA
8
 
 
8
SelCys 
 
 
 
 
 
TCA
7
7