tRNA Gene Summary

Overview
High confidence set 319
tRNAs decoding standard 20 AA 318
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 14
Unexpected anticodons 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 7
Secondary filter (low feature scores, possible rep. element) 39

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 29)
Arg TCT
1
Leu CAA
3
Phe GAA
1
Ile TAT
4
Tyr GTA
20
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
20
GGC
 
CGC
5
TGC
11
36
GlyACC
 
GCC
10
CCC
4
TCC
13
27
ProAGG
8
GGG
 
CGG
4
TGG
9
21
ThrAGT
7
GGT
 
CGT
1
TGT
7
15
ValAAC
7
GAC
1
CAC
11
TAC
3
22
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
13
GGA
1
CGA
5
TGA
6
ACT
 
GCT
8
 
 
 
 
33
ArgACG
8
GCG
 
CCG
3
TCG
2
 
 
 
 
CCT
4
TCT
3
20
LeuAAG
7
GAG
1
CAG
9
TAG
1
 
 
 
 
CAA
5
TAA
2
25
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
12
 
 
 
 
12
AsnATT
 
GTT
17
 
 
 
 
17
Lys 
 
 
 
CTT
8
TTT
6
14
AspATC
 
GTC
11
 
 
 
 
11
Glu 
 
 
 
CTC
10
TTC
13
23
HisATG
1
GTG
7
 
 
 
 
8
Gln 
 
 
 
CTG
15
TTG
4
19
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
7
GAT
2
CAT
 
TAT
4
13
iMet/Met 
 
 
 
CAT
10/7
 
 
17
TyrATA
 
GTA
20
 
 
 
 
20
Supres 
 
TCA
 
CTA
 
TTA
1
1
CysACA
 
GCA
14
 
 
 
 
14
Trp 
 
 
 
CCA
7
 
 
7
SelCys 
 
 
 
 
 
TCA
2
2