tRNA Gene Summary

Overview
High confidence set 239
tRNAs decoding standard 20 AA 239
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 144289
Secondary filter (low feature scores, possible rep. element) 270

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 14)
Arg TCT
4
Leu CAA
3
Ile TAT
2
Tyr GTA
5
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
8
GGC
 
CGC
3
TGC
1
12
GlyACC
 
GCC
8
CCC
3
TCC
6
17
ProAGG
6
GGG
 
CGG
3
TGG
4
13
ThrAGT
5
GGT
 
CGT
3
TGT
5
13
ValAAC
5
GAC
 
CAC
4
TAC
2
11
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
6
GGA
 
CGA
2
TGA
2
ACT
 
GCT
5
 
 
 
 
15
ArgACG
6
GCG
 
CCG
2
TCG
5
 
 
 
 
CCT
5
TCT
5
23
LeuAAG
3
GAG
 
CAG
5
TAG
2
 
 
 
 
CAA
3
TAA
2
15
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
5
 
 
 
 
5
AsnATT
 
GTT
9
 
 
 
 
9
Lys 
 
 
 
CTT
12
TTT
3
15
AspATC
 
GTC
7
 
 
 
 
7
Glu 
 
 
 
CTC
6
TTC
5
11
HisATG
 
GTG
6
 
 
 
 
6
Gln 
 
 
 
CTG
6
TTG
3
9
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
7
GAT
 
CAT
 
TAT
2
9
iMet/Met 
 
 
 
CAT
7/6
 
 
13
TyrATA
 
GTA
5
 
 
 
 
5
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
27
 
 
 
 
27
Trp 
 
 
 
CCA
4
 
 
4
SelCys 
 
 
 
 
 
TCA
 
0