tRNA Gene Summary

Overview
High confidence set 577
tRNAs decoding standard 20 AA 576
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 6
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 84
Secondary filter (low feature scores, possible rep. element) 80

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 29)
Arg TCT
5
Leu CAA
6
Ile TAT
6
Tyr GTA
12
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
34
GGC
 
CGC
5
TGC
10
49
GlyACC
 
GCC
15
CCC
10
TCC
8
33
ProAGG
13
GGG
 
CGG
6
TGG
7
26
ThrAGT
18
GGT
 
CGT
13
TGT
15
46
ValAAC
13
GAC
 
CAC
14
TAC
6
33
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
10
GGA
 
CGA
7
TGA
11
ACT
 
GCT
9
 
 
 
 
37
ArgACG
9
GCG
 
CCG
4
TCG
13
 
 
 
 
CCT
5
TCT
23
54
LeuAAG
14
GAG
 
CAG
9
TAG
4
 
 
 
 
CAA
8
TAA
9
44
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
12
 
 
 
 
12
AsnATT
 
GTT
24
 
 
 
 
24
Lys 
 
 
 
CTT
17
TTT
16
33
AspATC
 
GTC
23
 
 
 
 
23
Glu 
 
 
 
CTC
9
TTC
14
23
HisATG
 
GTG
13
 
 
 
 
13
Gln 
 
 
 
CTG
11
TTG
10
21
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
16
GAT
3
CAT
 
TAT
6
25
iMet/Met 
 
 
 
CAT
11/17
 
 
28
TyrATA
 
GTA
12
 
 
 
 
12
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
30
 
 
 
 
30
Trp 
 
 
 
CCA
10
 
 
10
SelCys 
 
 
 
 
 
TCA
1
1