tRNA Gene Summary

Overview
High confidence set 324
tRNAs decoding standard 20 AA 323
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 4
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 83
Secondary filter (low feature scores, possible rep. element) 53

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 23)
Arg TCT
6
Leu CAA
4
Ile TAT
4
Tyr GTA
9
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
12
GGC
 
CGC
4
TGC
8
24
GlyACC
 
GCC
13
CCC
4
TCC
11
28
ProAGG
9
GGG
 
CGG
3
TGG
6
18
ThrAGT
7
GGT
 
CGT
3
TGT
7
17
ValAAC
8
GAC
 
CAC
8
TAC
3
19
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
7
GGA
 
CGA
3
TGA
3
ACT
 
GCT
8
 
 
 
 
21
ArgACG
6
GCG
 
CCG
3
TCG
5
 
 
 
 
CCT
6
TCT
7
27
LeuAAG
5
GAG
 
CAG
8
TAG
3
 
 
 
 
CAA
4
TAA
3
23
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
7
 
 
 
 
7
AsnATT
 
GTT
10
 
 
 
 
10
Lys 
 
 
 
CTT
7
TTT
8
15
AspATC
 
GTC
11
 
 
 
 
11
Glu 
 
 
 
CTC
12
TTC
8
20
HisATG
 
GTG
6
 
 
 
 
6
Gln 
 
 
 
CTG
12
TTG
4
16
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
8
GAT
 
CAT
 
TAT
4
12
iMet/Met 
 
 
 
CAT
6/6
 
 
12
TyrATA
 
GTA
9
 
 
 
 
9
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
22
 
 
 
 
22
Trp 
 
 
 
CCA
6
 
 
6
SelCys 
 
 
 
 
 
TCA
1
1