tRNA Gene Summary

Overview
High confidence set 324
tRNAs decoding standard 20 AA 323
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 4
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 83
Secondary filter (low feature scores, possible rep. element) 53

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 33)
Pro GGG
1
Pro TGG
1
Val TAC
1
Ser GCT
1
Arg TCT
6
Leu CAA
4
Lys CTT
3
Gln TTG
2
Ile TAT
4
Tyr GTA
9
Supres TCA
1
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
15
GGC
 
CGC
4
TGC
14
33
GlyACC
1
GCC
15
CCC
7
TCC
12
35
ProAGG
9
GGG
1
CGG
3
TGG
10
23
ThrAGT
9
GGT
1
CGT
3
TGT
9
22
ValAAC
9
GAC
 
CAC
9
TAC
7
25
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
3
CGA
3
TGA
4
ACT
 
GCT
10
 
 
 
 
29
ArgACG
6
GCG
 
CCG
5
TCG
5
 
 
 
 
CCT
7
TCT
7
30
LeuAAG
5
GAG
 
CAG
10
TAG
5
 
 
 
 
CAA
8
TAA
3
31
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
3
GAA
13
 
 
 
 
16
AsnATT
 
GTT
11
 
 
 
 
11
Lys 
 
 
 
CTT
20
TTT
13
33
AspATC
2
GTC
14
 
 
 
 
16
Glu 
 
 
 
CTC
16
TTC
11
27
HisATG
2
GTG
6
 
 
 
 
8
Gln 
 
 
 
CTG
20
TTG
6
26
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
16
GAT
 
CAT
 
TAT
6
22
iMet/Met 
 
 
 
CAT
8/7
 
 
15
TyrATA
1
GTA
10
 
 
 
 
11
Supres 
 
TCA
3
CTA
 
TTA
2
5
CysACA
2
GCA
24
 
 
 
 
26
Trp 
 
 
 
CCA
8
 
 
8
SelCys 
 
 
 
 
 
TCA
1
1