tRNA Gene Summary

Overview
High confidence set 401
tRNAs decoding standard 20 AA 400
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 5
Unexpected anticodons 2
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 36415
Secondary filter (low feature scores, possible rep. element) 4087
Tertiary filter (excessive isotype copies, possible rep. element) 2

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 22)
Arg TCT
4
Leu CAA
4
Ile TAT
4
Tyr GTA
10
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
13
GGC
 
CGC
9
TGC
11
33
GlyACC
 
GCC
13
CCC
6
TCC
7
26
ProAGG
6
GGG
 
CGG
3
TGG
7
16
ThrAGT
9
GGT
 
CGT
4
TGT
4
17
ValAAC
7
GAC
 
CAC
10
TAC
3
20
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
8
GGA
 
CGA
3
TGA
3
ACT
 
GCT
7
 
 
 
 
21
ArgACG
6
GCG
 
CCG
3
TCG
5
 
 
 
 
CCT
5
TCT
5
24
LeuAAG
5
GAG
 
CAG
10
TAG
3
 
 
 
 
CAA
4
TAA
4
26
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
7
 
 
 
 
7
AsnATT
 
GTT
13
 
 
 
 
13
Lys 
 
 
 
CTT
19
TTT
13
32
AspATC
 
GTC
16
 
 
 
 
16
Glu 
 
 
 
CTC
11
TTC
8
19
HisATG
 
GTG
10
 
 
 
 
10
Gln 
 
 
 
CTG
10
TTG
6
16
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
11
GAT
 
CAT
 
TAT
4
15
iMet/Met 
 
 
 
CAT
9/8
 
 
17
TyrATA
 
GTA
10
 
 
 
 
10
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
54
 
 
 
 
54
Trp 
 
 
 
CCA
8
 
 
8
SelCys 
 
 
 
 
 
TCA
1
1