tRNA Gene Summary

Overview
High confidence set 693
tRNAs decoding standard 20 AA 693
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 15
Unexpected anticodons 7
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 168
Secondary filter (low feature scores, possible rep. element) 132
Tertiary filter (excessive isotype copies, possible rep. element) 3

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 34)
Met CAT
19
Tyr GTA
15
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
25
GGC
 
CGC
6
TGC
21
52
GlyACC
 
GCC
29
CCC
6
TCC
21
56
ProAGG
14
GGG
 
CGG
3
TGG
23
40
ThrAGT
15
GGT
 
CGT
3
TGT
13
31
ValAAC
21
GAC
 
CAC
10
TAC
10
41
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
17
GGA
 
CGA
3
TGA
12
ACT
 
GCT
21
 
 
 
 
53
ArgACG
11
GCG
 
CCG
4
TCG
7
 
 
 
 
CCT
9
TCT
11
42
LeuAAG
14
GAG
 
CAG
3
TAG
10
 
 
 
 
CAA
18
TAA
10
55
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
22
 
 
 
 
22
AsnATT
 
GTT
31
 
 
 
 
31
Lys 
 
 
 
CTT
20
TTT
24
44
AspATC
 
GTC
35
 
 
 
 
35
Glu 
 
 
 
CTC
17
TTC
15
32
HisATG
 
GTG
14
 
 
 
 
14
Gln 
 
 
 
CTG
10
TTG
12
22
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
26
GAT
 
CAT
 
TAT
9
35
iMet/Met 
 
 
 
CAT
20/19
 
 
39
TyrATA
 
GTA
18
 
 
 
 
18
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
17
 
 
 
 
17
Trp 
 
 
 
CCA
14
 
 
14
SelCys 
 
 
 
 
 
TCA
 
0