tRNA Gene Summary

Overview
High confidence set 693
tRNAs decoding standard 20 AA 693
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 15
Unexpected anticodons 7
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 168
Secondary filter (low feature scores, possible rep. element) 132
Tertiary filter (excessive isotype copies, possible rep. element) 3

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 43)
Pro TGG
1
Thr TGT
1
Leu AAG
1
Leu CAA
1
Glu TTC
1
Met CAT
21
Tyr GTA
15
Supres TTA
1
Cys GCA
1
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
30
GGC
 
CGC
6
TGC
22
58
GlyACC
1
GCC
32
CCC
7
TCC
25
65
ProAGG
15
GGG
 
CGG
3
TGG
31
49
ThrAGT
18
GGT
5
CGT
3
TGT
17
43
ValAAC
22
GAC
6
CAC
10
TAC
11
49
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
19
GGA
5
CGA
5
TGA
16
ACT
 
GCT
22
 
 
 
 
67
ArgACG
15
GCG
 
CCG
4
TCG
7
 
 
 
 
CCT
9
TCT
14
49
LeuAAG
17
GAG
 
CAG
4
TAG
20
 
 
 
 
CAA
25
TAA
10
76
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
30
 
 
 
 
30
AsnATT
67
GTT
41
 
 
 
 
108
Lys 
 
 
 
CTT
23
TTT
27
50
AspATC
3
GTC
47
 
 
 
 
50
Glu 
 
 
 
CTC
17
TTC
22
39
HisATG
 
GTG
25
 
 
 
 
25
Gln 
 
 
 
CTG
10
TTG
22
32
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
35
GAT
 
CAT
 
TAT
9
44
iMet/Met 
 
 
 
CAT
25/41
 
 
66
TyrATA
7
GTA
18
 
 
 
 
25
Supres 
 
TCA
 
CTA
 
TTA
41
41
CysACA
 
GCA
20
 
 
 
 
20
Trp 
 
 
 
CCA
22
 
 
22
SelCys 
 
 
 
 
 
TCA
 
0