Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>............<<<.>>>>>...............................................................................<<<<<...................>>>>>.......<<<<<.<<<<<<<. GGGCGCATGGTTTAGTGGT..A.TAATACCTCTTTAGCAttcattctaacgagcgaatggctaagc.............................................TAGAGGTG..............GtCCGGCGTTCGATTCGCCG.TGCGTCCA tRNA-Ala-AGC-1-2 Sc: 56.4 GGGCGCATGGTTTAGTGGT..A.TAATACCTCTTTAGCAtgtcttgtctttggcaacatggctatccaaac........................................TAGAGGTG..............GtCCGGCGTTCGATTCGCCG.TGCGTCCA tRNA-Ala-AGC-1-1 Sc: 56.2 GGGCGCATGGTTTAGTGGT..A.TAATACCTCTTTAGCAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnc.....................TAGAGGTG..............GtCCGGCGTTCGATTCGCCG.TGCGTCCA tRNA-Ala-AGC-1-3 Sc: 55.5 >>>>>>>..>>>............<<<.>.>>.................................................................................<<.<...................>>>>>.......<<<<<.<<<<<<<. GGGAGTGTGGTTTAGGGGT..A.TAACGTCTGCTTCGCAtctcttgctgcgtagtttgctgaagggtaagcaatcttgaaatcccaagtaatgtgtcaacgttaaactaacAACACGT.TCCA..........GtCTTGGGTTCGATTCCCAA.CACTTCCA tRNA-Ala-CGC-1-1 Sc: 38.9 >>>>>>>..>>>>..........<<<<.>>>>>...............................................................................<<<<<...................>>>>>.......<<<<<.<<<<<<<. GGGGATATGGCGCAGTGGAttA.GCGCGTTCGCTTTGCAtaacatgcatgtc...........................................................TGTGAAAG..............GaCCGGGGTTCGATCCCCTG.TATCTCCA tRNA-Ala-TGC-2-1 Sc: 61.6 >>>>>.>..>>>>..........<<<<.>>>>>...............................................................................<<<<<...................>>>>>.......<<<<<.<.<<<<<. GGGCGTGTAGCTCAGGGGT..A.GAGCGCTCGCTTTGCAtctggtgtt...............................................................TGCGAGAG..............GtCTAGGGTTCGATTCCCTA.CCCGTCCA tRNA-Ala-TGC-1-1 Sc: 58.9
Arg tRNAs
>>>>>>>..>>>..........<<<..>.>>..................................................................................<<.<...........................>.>..>.......<.<.<.<<<<<<<. GGCCGGCTGGCCCAATGGCA.AGGCGCTTGACTACGActatccattaggtctatcaagagattgcagggtatgcaatgactgtgaatttcttattcgcgcatt.........ATCTA..ACG...................AcTGAAtAGTTCGATCCCTGC.GTCGGTCA tRNA-Arg-ACG-3-1 Sc: 30.6 >>>>>>>..>>>..........<<<.>.>>>..................................................................................<<<...<.........................>...>.......<..<..<<<<<<<. GGCCTGCTGGCCCAATGGCA.AGGCGCTTGACTACGAttcactgagtccatcaagagattgcagggtgagcacattcagtacatcaacattccatggctggttca.......CTTAC..GAT...................C.AACT.AGTTCGATCCCTGC.GTAGGTCA tRNA-Arg-ACG-2-1 Sc: 27.9 >>>>>>>..>>>..........<<<.>>.>>..................................................................................<<.<..<..>>>>...........<<<<....>...>.......<..<..<<<<<<<. GGCCTGCTGGCCCAATGGCA.AGGCGCTTGACTACGAttcattagagtccatcaagagattgcagggtaagctacattgatttattgaaa......................ATCCActGTGCAGTGGCT......GACTGTtCACT.AGTTCGATCCCTGC.GTAGGTCA tRNA-Arg-ACG-1-1 Sc: 27.3 >>>>>>>..>>>>........<<<<.>>>>>..................................................................................<<<<..<........................>>>.>>.......<<<<<.<<<<<<<. GGGTGGTTGGCGCAATGGTA.GCGCGTTGGTTTTCGGttaagaggtacccattcctcgatatcggca.............................................CACCA..AAG...................GtTGAG.GGTTCGAGCCCCTT.GCTGCTCG tRNA-Arg-TCG-1-1 Sc: 52.1 >>>>.....>>>>........<<<<.>>>>>..................................................................................<<<<..<........................>>>.>>.......<<<<<....<<<<. TGCT...TGGCTCAATGGTA.GAGCGTCCGCCTCCTAcacatcgtcggt...............................................................AGCGG..AAG...................GtTGTG.GGTTCGAGTCCCAT.GGTGGTAA tRNA-Arg-CCT-1-1 Sc: 54.5 >>>>>>>..>>>>........<<<<.>>>>>..................................................................................<<<<..<........................>>>.>>.......<<<<<.<<<<<<<. TGTCTGTTAGTTTAATGGTA.GAACAAGGTATTCCTA...........................................................................ATACT..TTA...................A.TCTG.GGTTCGAATCTTAG.ACAGATAA tRNA-Arg-CCT-2-1 Sc: 39.9 >>>>>>>..>>>>........<<<<.>>>>>..................................................................................<<<<..<........................>>>.>>.......<<<<<.<<<<<<<. GCCTTGTTAGTGAAGTGGTA.TCACGCCAAACTTCTAgtgaagccgtggtgaatggaatgcaaggcatgacagggtaccctccgggcagtagagcaggacgcggttggaggtCTTTG..GT....................AtCGTG.AGTTCGATTCTCAC.ACAAGGCA tRNA-Arg-TCT-1-1 Sc: 55.3
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>..................................................<<<<<................>>>>>.......<<<<<....<<<<<<<. TCTTCCGTGGCGCAATTGGCtA.GCGCGTTCGACTGTTA...........................................ATCGAGAG...........GtTGGTGGTTCAAGCCCACC....CGGAAGAG tRNA-Asn-GTT-1-1 Sc: 73.6 GCCTTCATAGCTCAAT.GGT.A.GAGCAGAATACTGTTA...........................................ATATTCTG...........A.TATATGTTCAATTCATAT....TGAGGGCT tRNA-Asn-GTT-3-1 Sc: 58.6 >>>......>>>>..........<<<<.>>>>>..................................................<<<<<................>>>>>.......<<<<<........<<<. GCCCA...GGCGCAATTGGCtA.GCGCGTACGACTGTTAagcgtgatctttgaatcgttcgatttcaaaatcatgagcatcaATCGTGAG...........GtTGGAAGTTCAAGCCTTCC.cggGGGAGGCA tRNA-Asn-GTT-2-1 Sc: 37.8
Asp tRNAs
>>>>>>>..>>>...........<<<.>>>>>......................<<<<<...............>>>>>.............<<<<<<<<<<<<. TCTTCATTGGTCTAGTGGTcA.TGATTTCCGCTTGTCAtcctagaatttcaagCGCGGGAG...........ACCTGGGTTCGATT......CCCAGATGGAGAG tRNA-Asp-GTC-1-1 Sc: 61.8 >>>>>....>>>...........<<<.>>>>>......................<<<<<...............>.>>>.............<<<.<..<<<<<. TCTTCATTGGTCTAGTGGTcA.TGATTTCCGCTTGTCAtcttacgatagcaagCGCGGGAG...........ACCTGGGTTCGATTcgtaagCTCCGCCGAAGAA tRNA-Asp-GTC-2-1 Sc: 21.0
Cys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<.<<<<<<<. GAAGCGGTAGCTCAGCGGTA.GAGCAGCCGATTGCAGcgatgcattc.......CTCGGCAG...........GtCACTTGTTCAATCCAGGT.TCGCTTCT tRNA-Cys-GCA-1-1 Sc: 54.8 >>.......>>>>........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<......<<. GC......AGCTCAGTGGTA.GAGCGTGGGATTGCAGtacacgtacagcattctATCCTAAG...........GtCACTTGTTCGAACCAGGT.GGGGAGCT tRNA-Cys-GCA-2-1 Sc: 47.0
Gln tRNAs
>>>>>>>..>>>...........<<<.>>>>>....................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTCTATAGTGTAGCGGTtA.TCACATCGGATTCTGAttctacagaaca.TTCCGGGA...........ACCCAGGTTCGATTCCTGGTAGGACCT tRNA-Gln-CTG-1-1 Sc: 58.8 GGTCTTATAGTGTAGCGGTtA.TCACATCGGATTCTGAttgttcagaacg.TTCCGGGA...........ACCCAGGTTCGATTCCTGGTAGGACCT tRNA-Gln-CTG-2-1 Sc: 57.1 >>>>>>>..>>>>.........<<<<.>>>>>....................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTCTTATAGTGTAGCGGTtA.GCACATCGGATTTTGAttactcaaaaatgTTCCGGGA...........ACCCAAGTTCGATTCTTGGTAAGACCT tRNA-Gln-TTG-1-1 Sc: 56.6
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCAATGTGGTGTAACGGTcA.GCATATGCGGCTCTCAgttgactatcatcatcagtg........................................................................CCTGCATG............ATCAGGGTTCAATTCCCTGCATTGGAG tRNA-Glu-CTC-1-1 Sc: 50.8 >>>>>>>..>>>...........<<<.>>>>.....................................................................................................<<<<................>>>>>.......<<<<<<<<<<<<. GGCATCGTAGCAAAGTGGTtA.ATGCGTGAGTTTCTCCatcggagcaactgtacgcaccagtttctaacctagctacaggtttgactcgaatacgctctctctgctagagtaacattctgatatcaaataCCCTCGGGT...........GCGCAGGTTCGAGTCCTGCCGATGTCG tRNA-Glu-CTC-2-1 Sc: 39.6 >....>...>>>>.........<<<<.>>>>>...................................................................................................<<<<<.................>>>>.......<<<<..<....<. GA...TATAGTCCAGTGGTtA.GGATATTCCGCTTTCAaatgattgctttcggcatgtattgaatgga..............................................................CCGGAAAG............ACCCGGGTTCAAA.CCCGTAAGTC.CA tRNA-Glu-TTC-1-1 Sc: 23.9
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>......................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCATTGGTGGTTTAGTGGT.A.AAATTAGCCGTTGCCAtgcgacatagcatat................................................TCGGCTAG...........C.CCCGGGTTCGATTCCCGGCCGATGCA tRNA-Gly-GCC-1-1 Sc: 60.0 >>>>>>>..>>>>.........<<<<.>..>>......................................................................<<..<.................>>>>.......<<<<.<<<<<<<. GCATTGGTGGTTTAGTGGT.A.AAATTAGCCGTTGCCAtgtctatcatactcggctagcccgtaagtacacaccgtcgatacgattgcattcctccaactgACGAATTG...........TtAGCGGGTTCGATTCCCGGCCGATGCA tRNA-Gly-GCC-2-1 Sc: 29.3 >>>>>>>..>>>...........<<<.>>>>>......................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCACTGCTAGTGTAGTGGTtA.TCATGTCACTTTCCCAtcgagtattgatgagata.............................................AAGTGGAG...........GtCGCGAGTTCGAATCTCGCGTAGTGCA tRNA-Gly-CCC-1-1 Sc: 64.1 >>>>>>>..>>>>.........<<<<.>>>>>......................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCATCTATGGTCTAATGGTtA.GGATTGCCGCCTTCCAcactattactgtgtc................................................AGCGGCAG...........G.TTCGGGTTCAATTCCCGATGGATGCA tRNA-Gly-TCC-1-1 Sc: 57.0
His tRNAs
>>>>>>>..>>>............<<<.>>....................................................................................................<<..............>>>>>.......<<<<<.<<<<<<<. GGTCAGATGGCCGAGCGGTctA.AGGCGTGAGTGGTGctcaagcatatcaccagtttcaactagcagctaacaatttcgtaggccacgttaaggtctcaaccttaagcattgttccgtggtctggttA..CAG...........GCGTGAGTTCGAATCTCAC.TCTGATCA tRNA-His-GTG-1-1 Sc: 40.0
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCGGTTAGCTCAGTTGGTtA.GAGCGTGGTGCTAATAcattattgtgtca...........................................................A..CGCCAAG...........GtCGCGAGTTCGACCCTCGTACTGACCA tRNA-Ile-AAT-1-1 Sc: 71.0 GGTCGGTTAGCTCAGTTGGTtA.GAGCGTGGTGCTAATAcatttcttctgtgttc........................................................A..CGCCAAG...........GtCGCGAGTTCGACCCTCGTACTGACCA tRNA-Ile-AAT-1-2 Sc: 70.9 >>>>>>...>>>>..........<<<<.>>.>>.................................................................................<<.<<................>>>>>.......<<<<<.<<<<<<. GGCCTCATGGTGCAAT.GGT.A.GCACGTCCGG..GAAAtggtattgcgatattggatcaacgaaaagagcaggatctagccgtccaactccatcgaccgagattgatgtgA..CCAGGTA...........A.CCTGCGTTCGATTCGTAGGGAGGCCA tRNA-Ile-AAT-2-1 Sc: 27.9
Leu tRNAs
>>>>.>>..>>>>..........<<<<.>>>>>.......................................<<<<<..>>...............<<...>>>>>.......<<<<<.<<.<..<<<. GGCAAGGTGTCCGAGTGGTt.A.TGGAGCTGCGTTTAGGttacctatgcattct.................CCGCAGTGGC...TTT.........GCCtCGTGGGTTCGAATCCCAC.CCGTaaGTTT tRNA-Leu-TAG-1-1 Sc: 37.0 >>>>>>>..>>>>..........<<<<.>>.>>.......................................<<.<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<..<<<. GGCAAGATGGCCGAGTGGTt.A.TGGCGTGTGACTCAAGcttcggcttcctgcctcgaacgcaggctagaaTTCTCAT.GGGC.TTT.......GCCCG.CGGGGGTTCGAATCCCCC.TCTT..GTCA tRNA-Leu-CAA-1-1 Sc: 71.1 >>>>>>>..>>>............<<<.>>>>>.......................................<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<..<<<. GCTACGGTGGCCGAGTGGTctA.AGGCGGTAGATTTAAGtctctaaactgaaaa.................CTCTACT.GGAGA.........GATCCG.CGCGCGTTCGAACCGCGT.CCGT..AGCA tRNA-Leu-TAA-1-1 Sc: 53.0
Lys tRNAs
>>>>>>>..........>>>>........<<<<.>>.>>....................................<<.<<................>>.>>................<<......<<<<<<<..<<. GCCGGGGT........AGCTCAATCGGTAGAGCGTGTGGCTCTTAtaatgcaatgcatatcatgcaacgagatcACCTCAAG...........GtCGTGGGTTCGAGC.........CCGtgagtACCTCTGaaGTA tRNA-Lys-CTT-1-1 Sc: 36.8 >>>>>.>..........>>>>........<<<<.>>.>>....................................<<.<<................>>>>..................<<.....<<<.<<<..<<. CCATAATTgccggggtAGCTCAATCGGTAGAGCGTGTGGCTCTTAcaagcaattcatgcagagatc........ACCTCAAG...........GtCGTGGGTTCGAGCgtatgttacACC.....GCAATAT..GGT tRNA-Lys-CTT-2-1 Sc: 29.3
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGCTTTGTGGCGCAGC.GGA.A.GCGCGCCGGGCTCATA...........................ACCCGGAG...........GaCCTCAGATCGAAACTGAGCAAAGCTA tRNA-iMet-CAT-2-1 Sc: 67.5 AGCTTCCTGGCGCAGC.GGA.A.GCGCGTCGGGCTCATAcctcaacacaacgctgtttgacggtcgACCCGAAG...........GtCCTTGGATCGAAACCAAGGGAAGCTA tRNA-iMet-CAT-1-1 Sc: 61.7 AGCTTCGTAGCTAAGC.GGA.A.TAGCGCCGGGCTCATA...........................ACCCGGAG...........GtCGGTGGATCGAAACCACTCGAAGCTA tRNA-iMet-CAT-3-1 Sc: 58.0 GCCAGGATAGTTCAATTGGTtA.GAACATTAATTTCATG...........................CATTAAGA...........A.TGAGAATTCAAATTTCTCTCCTGGTT tRNA-Met-CAT-1-1 Sc: 41.2
Phe tRNAs
>>>>>>>..>>>>..........<<<<......>>>>.................................................................................................<<<<................>>>>>........<<<<<.<<<<<<<. GCCCGAGAAGCTCAATTGGC.C.GAGCG.....GAGCTCTGAAG........................................................................................ATGCTTAG...........GtTGTAAGTTCAAAT.CTTAC.CTTGGGCG tRNA-Phe-GAA-2-1 Sc: 50.9 >>>>>>>..>>>............<<<......>>>>>...............................................................................................<<<<<................>>>>>........<<<<<.<<<<<<<. GGTCATGTAGTGTAGT.GGTtA.TCGTAagttcTTTCGCCGAAGctttcaaagattctgaagctgacgacatctcaagacgtctcgttgtggctatatgcttaacaacgc......................CCGAGGAG...........GtCCCCTGTTCGATC.CAGGG.TATGGCCA tRNA-Phe-GAA-3-1 Sc: 27.4 >>>>>>>..>>>>..........<<<<......>..>>...............................................................................................<<..<................>.>............<.<.<<<<<<<. GTCGCTTTAGCTCACTTGGG.A.GAGCG.....CCAGACTGAAGtccacttcatgtcatccacaactgtgcggtatctggaggtactgtgtgtaagttaaaccattaattcacagctcttggtcattacctaATTAAGC............A.CCAG...TCGATC.CACAG.AAGCGACA tRNA-Phe-GAA-1-1 Sc: 26.7
Pro tRNAs
>>>..>.>>..>>>..........<<<.>>.>>>...............................................................................................<<<.<<...................>>>>>.........<<<<<<<.<<<<. GTCatTAGTTGGTCTAGTGGTA.TGATTCT.CGCTTAGGGctcaccctgagaacaatt....................................................................T..GCG.AGAG..............GtCCCGCGTTCAATC..CGCGGATCGGACC tRNA-Pro-AGG-1-1 Sc: 44.7 >>>..>>>>..>>>>........<<<<.>>.>>>...............................................................................................<<<.<<...................>>>>>.........<<<<<<<<<<<<. GGC..GAGGTGGTGCAGTGTTA.GCATACC.TGA..GGGGggctttacgcagagcactgcggtgaagctgtcgaaagtccggcgcatcgttcaagtcgtcagtaccacaccaaa............C..TCA.GGGG..............A.CGCACGTTCGACT..CGTGCTCTTGCCA tRNA-Pro-GGG-1-1 Sc: 31.4 >.......>..>>>>........<<<<.>>.>>>...............................................................................................<<<.<<...................>>>>>.........<<<<<<.....<. GC......GTGGTGCAGTGGTA.GCACGCGtGGGTTGGGGggacccctgttgctacgggccatttgattcagaatcgatggacgagggagcaaagacactcccagaacttcagtctgcaactctt.A..CTCgCGAG..............A.CGGTGGTTCGATT..CCATCCTT..TCT tRNA-Pro-GGG-2-1 Sc: 27.3 >>>..>>>>..>>>..........<<<..>..>>...............................................................................................<<..<....................>.>.............<.<<<<<<<<. GGC..TCAATGGTCTAGTGGTA.TGATTGT.CGCTTCGGGtaactcccacaatgcttgcattgccgcaaatgtgacaggccccgggttgtaagtgtacccaccagctagcatgtgtaatgacttggA..GCT.AATGCAA...........AtACAG....CAAAT..CCCGGTTGAGCCC tRNA-Pro-CGG-1-1 Sc: 24.6 >>>..>>>>..>>>..........<<<.>>.>>>...............................................................................................<<<.<<...................>>>>>.........<<<<<<<<<<<<. GGC..CCAATAGTGTAGTGGTA.TCATACA.TGCTTTGGGaaatccaacaccaaaggtgcatg...............................................................T..GCA.TGTG..............A.CAGGCGTTCGATT..CGCCTTTGGGCCC tRNA-Pro-TGG-1-1 Sc: 52.6 GGC..CCAATAGTGTAGTGGTA.TCATACA.TGCTTTGGGaattccaacaccaaaggtgcatg...............................................................T..GCA.TGTG..............A.CAGGCGTTCGATT..CGCCTTTGGGCCC tRNA-Pro-TGG-1-2 Sc: 52.6
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>............<<<.>>>>>...........................<<<<<.>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GGCGTTGTAGCAAAGTGGTt.A.CTGCGATTGACTAGAAcgcctgcacaggcaattgctATCAATTCCCT.TC.......GGGGGCGTAGGTTCGAATCCTGC.CAACGTCG tRNA-Ser-AGA-1-1 Sc: 60.5 GGCGTTGTAGCAAAGTGGTt.A.CTGCGATTGACTAGAAcgcctttatcggcaattgctATCAATTCCCT.TC.......GGGGGCGTAGGTTCGAGTCCTGC.CAACGTCG tRNA-Ser-AGA-2-1 Sc: 59.9 >>>>>>>..>>..............<<.>>>>>...........................<<<<<.>>>>>........<<<<<..>>>>>.......<<<<<.<<<<<<<. AACAACGTGGCAGAGTGGTctA.AAGCTTGTGACTCGAA....................ATCATATCTCCT........AGGAGGCGTCTGTTGGAATCAGGC.CGTTGTTG tRNA-Ser-CGA-1-1 Sc: 45.1 >>>>>>>...>>............<<...>>>.............................<<<..>>>>..........<<<<..>>..>.......<..<<.<<<<<<<. GACAACGTGACAGAGTGGTctA.ATGCGCATGACTCGAA....................ACCATATCTCCA........AGGAGGCGTGTGCTCGAATCCGGC.CGTTGTCT tRNA-Ser-CGA-2-1 Sc: 26.9 >>>...>..>>>............<<<.>>>>>...........................<<<<<.>>>>..........<<<<...>>>>.......<<<<..<...<<<. GCTGTGGTGTCGGAGTGGTt.A.ACGAGTCAGACTTGAAtgcttctttgcttctagat.ATCTGATGCCT.TC.......GGGCGCGCAGGTTCGAATCCTGG.T..AAGCA tRNA-Ser-TGA-1-1 Sc: 40.4
Sup tRNAs
Thr tRNAs
>>>>..>>>..>>>>........<<<<.>>>>>......................................................................................................................................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GCCC..GCTTAGCTCAGTGGTA.GAGCGCATCACTAGTAcaaatatcgtcc...................................................................................................................................ATGATGAG...........Gt.CAGAGGTTCGACTCCTCTAGCGGGCA tRNA-Thr-AGT-1-1 Sc: 75.6 GCCC..GCTTAGCTCATCGGTA.GAGCGCGTCACTAGTActcgtgagatgtgag................................................................................................................................ATGACGAG...........Gt.GATTGGTTCGATTCCAGTAGCGGGCA tRNA-Thr-AGT-2-1 Sc: 61.1 >>>>..>>>..>>>>........<<<<.>>>.>......................................................................................................................................................<.<<<..................>>>.........<<<.<<<<<<<. GCCC..GCTTAGCTCATCGGTA.GAGCGCGTCACTAGTAatgacgaggtgattggttgtaagttgtctcgacacgaacgaaattaattagatcgttc.....................................................................................CTAACGGC...........GttCTCTGTAGCGATTCCAGTAGCGGGCA tRNA-Thr-AGT-3-1 Sc: 35.7 >>>>..>>>..>>>>........<<<<.>>>>>......................................................................................................................................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GGCG..AGGTGGTGCAGTGGTA.GCACGCGTGAGGGGTGcctagctgcaatcattcattacagcagtcgaaagcacggacgcatcgtataagtcgttcagtaccatga..........................................................................CTCACGAG...........A..CGATGGTTCGAGTCCATCTCTTGCTG tRNA-Thr-GGT-1-1 Sc: 44.7 GGCG..AGGTGGTGTAGTGGTA.GCACACGTGAGGGGTGcctagctgcagtcattctttacagcagtcgaaagcatgggcgcatcttataagacgtcccgtaccataa..........................................................................CTCACGAG...........A..GGGATGTTCGATTCATTCTCTCGCCA tRNA-Thr-GGT-2-1 Sc: 36.7 GGCG..AGGTGGTGCAGTGGTA.GCACACCTGAGGGGTGcctagctgcaatcattctttacagcagtcgaaagcatgggcgcatcgcataagtcgcccagtaccacgaa.........................................................................CTCAGGAG...........A..GGGATGTTCAATTCATTCTCTCGCTA tRNA-Thr-GGT-4-1 Sc: 34.6 GGCG..AGGTGGTGCAGTGGTA.GCACACCTGAGGGGTGcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggtagcacacctgaggggtgcctagctgcaatcattctctacaagcagtcgaaagcacgggtgcatcgcataagccgcccagtaccgcagaCTCAGGAG...........A..GGAATGTTCGATTCATTCTCTTGCCC tRNA-Thr-GGT-3-1 Sc: 33.5 >>>>..>>>..>>>>........<<<<.>>>>>......................................................................................................................................................<<<<<.................>>.>.........<.<<<<<<<<<. GGTAtgGGATGGTGCAGTGGTA.GCACGCGTGAGGGGTGtctagctgcaatcattctttccagcagtcgaaagcacggacgcatcttataagtcgtacagtaccaacaa.........................................................................CTCACGAG...........A..CGCACTTTCGAATCGCGCTTTTGCCA tRNA-Thr-GGT-5-1 Sc: 22.3 >>>>..>>>..>>>..........<<<.>>>>>......................................................................................................................................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GCCC..GTTTGGCTTAGTGGTA.CAGCGTCTCACTCGTAtctctttgaacctctacgtc...........................................................................................................................ATGAGAAG...........At.CCTCGGTTCGATTCCGAGAATGGGCA tRNA-Thr-CGT-1-1 Sc: 67.7 >>>>..>>>..>>>>........<<<<.>>>>>......................................................................................................................................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GCCT..CTATGGCTCAGTGGTA.GAGCATTGCACTTGTAtctccgcttcgtgaacaagatt.........................................................................................................................ATGCAAAG...........Gt.CCATCGTTCAATCCGGTGTGGAGGCA tRNA-Thr-TGT-1-1 Sc: 70.2
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>......................<<<<................>>>>>.......<<<<<<<<<<<<. GGCCGCTTGGCGTAGTGGTA.ACGCGTCTGATTCCAGttctgtttggacaACCAGAAG...........AtCGTCCGTTCGAATCGGGCAGTGGTCA tRNA-Trp-CCA-1-1 Sc: 53.9
Tyr tRNAs
>>>>>>>..>>>>........<<<<..>.>...................................................................................<.<.................>.>>...........<<.<..<<<<<<<. CTCTCAATAGCTCAGCTGGAAGAGCGCAAGACTGTAAtggttcgactcagatcatcttgaggcccgcggtgtaagttacacaattgagaccatgccacgacct........CGCCTAAT...........GtCCTCGCAgTCGATC.CCGCG..TTGGGAGA tRNA-Tyr-GTA-1-1 Sc: 37.5 >>>>>>>..>>>>........<<<<...>>>.................................................................................<<<.......................................<<<<<<<. CTCTCAATAGCTCAGCTGGAAGAGCGCAAGACTGTAAtggataccaaatcatcttgaggcccgcggtgtgagtagatactccagcgtttccttgcgttcagtgactaacatCTCTCTAG.....................TCGATC.CCGCG..TTGGGAGA tRNA-Tyr-GTA-2-1 Sc: 37.2
Val tRNAs
>>>..>>>>......>>>..............<<<.>>>>>................................................................................................................................<<<.<<...................>>>>>.............<<<<<.<<<<<<<. GCT..CGAG....TGGTGCAAC.GGTtA...CCACGTCTGT.CTAACA........................................................................................................................CACA.GAAG..............AcTCCGCGTTCG......ATTCGCGG.CTTGAGTA tRNA-Val-AAC-1-1 Sc: 57.6 GCT..CGAG....TGGTGCAAC.GGTtA...CCACGTCTGT.CTAACA........................................................................................................................CACA.GAAG..............AcTCCGCGTTCG......ATTCGCGG.CTTGAGTA tRNA-Val-AAC-1-2 Sc: 57.6 >>>..>>>>......>>>>............<<<<.>>.>..................................................................................................................................<..<<...................>>>>>.............<<<<<.<<<<<<<. GCT..CGGA....TGGTGTAGTTGGT.T...GTACGTTCGCcCTTGTAttggaatgcaagcaagcagttactaataatgatatagatcacgtcagtctaacac.................................................................A.CT.GAAG..............GtCCTGAGTTCA......AGTCTCAG.TCCGAGTA tRNA-Val-AAC-2-1 Sc: 39.2 >>>..>>>>.......>>..............<<..>>..>................................................................................................................................<...<<...................>>>>>.............<<<<<.<<<<<<<. GCA..TTGG....TGGTTTAGT.G.......TAAGTTG..G.CTTATAtccgcacgcttgacgagctgtgctaacatagccaaagggtaaaattagccgttgccatgcgacaaacacattcggctagcgtaagtagttgtccaataactcatagcttcaacgttattaACAGtCAA.TTA...........G.CCCGGGTTCG......ATTCCCGG.CCGATGCA tRNA-Val-GAC-1-1 Sc: 21.0 >>>..>>>>......>>>..............<<<.>>>>>................................................................................................................................<<<.<<...................>>>>>.............<<<<<.<<<<<<<. GCC..GCTT....TGGTGTAGT.GGT.A...TCACGTTCGC.CTCACAcacgtttt................................................................................................................CGCG.AAAG..............GtCGGGAGTTCG......AAACTCCC.AGGCGGTA tRNA-Val-CAC-1-1 Sc: 66.2 GCT..TGTA....TGGTCTAGT.GGT.A...TGACGTGTCC.TTCACActtgaatcctcaaatggatgcattatatt...........................................................................................CGGA.CAAG..............GtCCTGGGTTCG......ATCCCCAG.TGCGAGTA tRNA-Val-CAC-2-1 Sc: 66.1 >>>..>.>>......>>>..............<<<.>>>>>................................................................................................................................<<<.<<...................>>>>...............<<<<.<<.<<<<. GTTtgTGGTttcgTGGTGTAGT.GGTtA...TCACGTTTCG.TTTACAtgcaacatccaatgcctgtgat..................................................................................................CCGA.AAAG..............GcCGCGAGTTCGtaagtcAAAATCGC.ACAAAACA tRNA-Val-TAC-1-1 Sc: 24.2