Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>...>>>...........<<<.>>>>>......................................................................................<<<<<................>>>>>..................................................................<<<<<.<<<<<<<. GGGTCTGT.GGTTTAGT.GGTA.TAATACTCCCTTAGCAatatcagcatctagctgagttgaa.......................................................TGGGAGTG...........GtCCGGGGTTCG...GTAagattcactgttcggtcccaactattcgctccaccttctaacagtactagatt...CCCCG.CGGATCCA tRNA-Ala-AGC-1-1 Sc: 32.3 GGGTCTGT.GGTTTAGT.GGTA.TAATACTCCCTTAGCActacccctgtcagggttgcatcgagctaata................................................TGGGAGTG...........GtCCGGGGTTCG...GTAagttccactctgttcgaaaaccagtctctacagttcactaacaatgccaatagattCCCCG.CGGATCCA tRNA-Ala-AGC-3-1 Sc: 30.9 GGGTCTGT.GGTTTAGT.GGTA.TAATACTCCCTTAGCAcagcttataccctgcatctaattcgagttaattcgagttaattcgggttaattggagctaatt................TGGGAGTG...........GtCCGGGGTTCGgcaAGTtctccacagttcgaaaacagtcctctgcatgattctaacaatataatagatt....CCCCG.CGGATCCA tRNA-Ala-AGC-2-1 Sc: 30.3 >>>>>>>...>>>...........<<<.>>>>>......................................................................................<<<<<................>>>>>..................................................................<<<<<.<<<<<<<. GGGCACTT.GGTCTAGG.GGTA.TGATTTTCGCTTCGCAtggcttaaaatgtt.................................................................TGTGAAAG...........GtCGTGGGTTCA...ATT........................................................CCCAC.AGTGTCCA tRNA-Ala-CGC-1-1 Sc: 59.3 >>>>>>>....>>>.........<<<....>>>......................................................................................<<<..................>>>>>..................................................................<<<<<.<<<<<<<. GGGGGCGT.GGCGCAAT.GGTA.GCGGT..AGGTTTCCActcgcacttcgtcatccacacacaaacaacatactaacaccccttatagcgtcagattccagtaatcaaccctggagttTCCTGAAG...........GcTGTGCGTTCA...AAT........................................................CGCAC.CGTCCTCA tRNA-Ala-CGC-2-1 Sc: 31.0 ..>>.>>...>>>>.........<<<<.>>>>>......................................................................................<<<<<................>>>>>..................................................................<<<<<.<<.<<... ACATCAATaGGCTCAGT.GGTA.GAGCGCCCGCTTTGCAgcaaaatctcgaa..................................................................TGCGGGAG...........GtCTAGGGTTCG...ATC........................................................CCCTA.TTCGTCCA tRNA-Ala-TGC-1-1 Sc: 42.7 >>>>>>>...>>>>.........<<<<.>>>>>......................................................................................<<<<<................>>>>>..................................................................<<<<<.<<<<<<<. GGGGGTAT.AGTCTAATTGGTA.AGACAGCGATCTTGCT...............................................................................CATCGTT............AtTTTAGGTTCG...AGT........................................................CCTGA.TATCTCCA tRNA-Ala-TGC-2-1 Sc: 39.9
Arg tRNAs
>>>>>>>...>>>.............<<<.>>>>>..........................................................................................<<<<<............................>>>>>.......<<<<<.<<<<<<<. GGCCGCGT.GGCCCAATGGC.A...AGGCGCTTGACTACGA...................................................................................ATCAAGAG.......................AtTCCAGGTTCGACCCCTGG.CGCGGTCA tRNA-Arg-ACG-1-1 Sc: 73.7 GGCCGCGT.GGCCCAATGGC.A...AGGCGCTTGACTACGA...................................................................................ATCAAGAG.......................AtTCCAGGTTCGACCCCTGG.CGCGGTCA tRNA-Arg-ACG-1-2 Sc: 73.7 GGCCGCAT.GGCCCAATGGC.A...AGGCGCTTGACTACGA...................................................................................ATCAAGAG.......................AtTCCAGGTTCGACCCCTGG.TGTGGTCA tRNA-Arg-ACG-2-1 Sc: 72.1 GGCCGCAT.GGCCCAATGGC.A...AGGCGCTTGACTACGA...................................................................................ATCAAGAG.......................AtTCCAGGTTCGACCCCTGG.TGTGGTCA tRNA-Arg-ACG-2-2 Sc: 72.1 >>>>>>>...>>>>...........<<<<.>>>>>..........................................................................................<<<<<............................>>>>>.......<<<<<.<<<<<<<. TACGCGTT.AGTTAAATGGT.A...TAATTTTGTGCTACGG...................................................................................ACACAAT........................GtTATAGGTTCGAATCCTAT.ACGCGTAT tRNA-Arg-ACG-3-1 Sc: 50.4 >>>>>>>...>>>>...........<<<<.>>>>>..........................................................................................<<<<<............................>>>>>.......<<<<<.<<<<<<<. GGCGCGGT.GGCCTAATGGT.A...AGGCGTTGCTTTCCGGcattaagaacaacatcttgtatcaggaaca.....................................................TGGCAAAG.......................AtTGTGGGTTCGAGTCCCAT.CCGCGTCG tRNA-Arg-CCG-1-1 Sc: 56.5 >>>>>>>...>>>>...........<<<<.>>>>>..........................................................................................<<<<<............................>>>>>.......<<<<<.<<<<<<<. GGGCGGTT.GGCGCAATGGT.A...GCGCGTTGGTTTTCGGatttgatg...........................................................................CACCAAAG.......................GtTGTGGGTTCGAGCCCCAT.GCTGCTCG tRNA-Arg-TCG-1-1 Sc: 56.8 >>>>>>>...>>...............<<..>>.>..........................................................................................<.<<.............................>>>>>.......<<<<<.<<<<<<<. GGGTCTGT.GGTTTAGTGGGtAag.TCATCGTCACTTCGAAatccacggaaaacccaaaattaacaagttccagtataatactcccttagcatcagcatcaacaacaccacgttgatccctgcaTGGGAGTG.......................GtCCGGGGTTCGATTCCCCG.CGGATCCA tRNA-Arg-TCG-2-1 Sc: 34.4 >.>>>>>...>>>>...........<<<<.>>>>>..........................................................................................<<<<<..>.....>.........<.....<...>>..>.......<..<<.<<<<<.<. GGGCCGGTtGGCGCAATGGT.A...GCGCGTGCGCCTCCTAccaacggacgagtccaggtac..............................................................AGCGCAAGGTTGCGGgTTCGg...TAAGTTCA.ACT..GTTCAAGTCCAAG.TTGGTACA tRNA-Arg-CCT-1-1 Sc: 22.2 >>>>>>>...>>>>...........<<<<.>>>>>..........................................................................................<<<<<............................>>>>>.......<<<<<.<<<<<<<. GCCCTGCT.AGCGCAATGGT.A...GCGCGTTGGACTTCTA...................................................................................ATCCAAAG.......................GcTGCGGGTTCGAGTCCCGC.GTGGGGTA tRNA-Arg-TCT-1-1 Sc: 83.5 >>>>>>>...>>>>...........<<<<.>>>>>..........................................................................................<<<<<............................>>>.>.......<.<<<.<<<<<<<. TTCTTATT.AGCTTAATGGT.A...AAGCAGGATACTTCTA...................................................................................ATATCTAG.......................A.TCCAAGTTCGAGTCCTGG.ATAGGAAT tRNA-Arg-TCT-2-1 Sc: 53.3 TTCTTATT.AGCTTAATGGT.A...AAGCAGGATACTTCTA...................................................................................ATATCTAG.......................A.TCCAAGTTCGAGTCCTGG.ATAGGAAT tRNA-Arg-TCT-2-2 Sc: 53.3
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCTCCGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTAcgggagctcgtcttcgtgca........ATCAGGAG...........GtTGACAGTTCAAGCCTGTCCGGGGGAG tRNA-Asn-GTT-1-1 Sc: 63.1 TCCTCCGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTAcgggagtcctctgggctcccactgca..ATCAGGAG...........GtTGACAGTTCAAGCCTGTCCGGGGGAG tRNA-Asn-GTT-1-2 Sc: 62.9 TCTTCCGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTActggaattcgtatccattgca.......ATCAGGAG...........GtTGACAGTTCAAGCCTGTCCGGGAGAG tRNA-Asn-GTT-2-1 Sc: 61.4 TCTCCCGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTAcgggagcactgccggtgctcccactgcgATCAGGAG...........GtTGACAGTTCAAGCCTGTCCGGGGGAG tRNA-Asn-GTT-3-1 Sc: 59.7 GCCTTTATAGCTCAAC.GGT.A.GAGCGGAATACTGTTA............................ATATTTTG...........A.TAGATGTTCGATTCATCTTAAGGGCT tRNA-Asn-GTT-4-1 Sc: 58.9
Asp tRNAs
>>>>>>>..>>>...........<<<.>>>>>...........................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTCGATGGTCTAGTGGTcA.TGATTTCCGCTTGTCAttggtgtccaatagcaag..CGCGGGAG...........ACCGGGGTTCGATTCCCCGTCGGAGAG tRNA-Asp-GTC-1-1 Sc: 62.6 TCTTCGATGGTCTAGTGGTcA.TGATTTCCGCTTGTCAaaacaaacgttctgagaag.CGCGGGAG...........ACCGGGGTTCGATTCCCCGTCGGAGAG tRNA-Asp-GTC-1-2 Sc: 62.5 TCTTCGATGGTCTAGTGGTcA.TGATTTCCGCTTGTCAtttgggctcaaatatcaag.CGCGGGAG...........ACCGGGGTTCGATTCCCCGTCGGAGAG tRNA-Asp-GTC-1-3 Sc: 62.5 TCTTCGATGGTCTAGTGGTgA.TGATTTCCGCTTGTCAaagcatctgctctagcaag.CGCGGGAG...........ACCGGGGTTCGATTCCCCGTCGGAGAG tRNA-Asp-GTC-2-1 Sc: 62.5 TCTTCGATGGTCTAGTGGTgA.TGATTTCCGCTTGTCAtttgggttccagatagcaagCGCGGGAG...........ACCGGGGTTCGATTCCCCGTCGGAGAG tRNA-Asp-GTC-2-2 Sc: 62.5
Cys tRNAs
>>>>>>>..>>>>........<<<<.>.>>>......................<<<.<................>>>>>.......<<<<<<<<<<<<. GCGTCAATAGCTCAGCGGTA.GAGCGTAGGATTGCAGttatctcgcagtc..ATCCCGAG...........GtCCCCGGTTCGATCCCGGGTTGGCGCT tRNA-Cys-GCA-1-1 Sc: 65.7 GCGTCAATAGCTCAGTGGTA.GAGTGTAGGATTGCAGttgtctcgcaaccccATCCCGAG...........GtCCTCGGTTCGACCCCGAGTTGGCGCT tRNA-Cys-GCA-2-1 Sc: 62.0
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTGTATAGTGTAGTGGCtA.GCACTCGGGATTCTGAtttgccagagta....................TTCCCGCA...........ACCCCGGTTCGATCCCGGGTACGACCT tRNA-Gln-CTG-1-1 Sc: 55.4 GGTTGTATAGTGTAGTGGCtA.GCACTCGGGATTCTGAtatttcagagca....................TTCCCGCA...........ACCCCGGTTCGATCCCGGGTACGACCT tRNA-Gln-CTG-1-3 Sc: 55.4 GGTTGTATAGTGTAGTGGCtA.GCACTCGGGATTCTGActttgagctgctgcaacgcagtccacggcgaaTTCCCGCA...........ACCCCGGTTCGATCCCGGGTACGACCT tRNA-Gln-CTG-1-2 Sc: 54.7 GGTTGTATAGTGTAGTGGCtA.GCACTCGGGATTCTGAcgtagagcggcagcaaggcagctcagggtgaaTTCCCGCA...........ACCCCGGTTCGATCCCGGGTACGACCT tRNA-Gln-CTG-1-4 Sc: 54.7 >>>>>>>..>>>...........<<<.>>>>>.......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTGTGTAGTGTAGTGGTtA.TCACTCCGGATTTTGAtgcactgcattgagacc...............TTCCGGCG...........ACCTGGGTTCGAGCCCCAGCACGACCT tRNA-Gln-TTG-2-1 Sc: 66.1 >>>>>>>..>>>>.........<<<<.>>>>>.......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTGTGTAGTGTAGTGGTtA.GCACTCTGGATTTTGActctgcaatcccccact...............TTCCAGCA...........ACCTGGGTTCGACTCCCGGCACGACCT tRNA-Gln-TTG-1-1 Sc: 58.0
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<.<<<<<<<. TCCGTTGTGGTCTAGG..GGCtA.GGATTTGCCGCTCTCAgataccagagcactcctcgcatcaagcg...CCGGCAAG...........G.CCCGGGTTCGATTCCCGG.CGACGGAA tRNA-Glu-CTC-1-1 Sc: 58.5 TCCGTTGTGGTCTAGG..GGCtA.GGATTTGCCGCTCTCAgataccagagcacacctcgcatcaagcg...CCGGCAAG...........G.CCCGGGTTCGATTCCCGG.CGACGGAA tRNA-Glu-CTC-1-2 Sc: 58.5 TCCGTTGTGGTCTAGG..GGCtA.GGATTTGCCGCTCTCAgatatcagagcactcctcgcatcaagcg...CCGGCAAG...........G.CCCGGGTTCGATTCCCGG.CGACGGAA tRNA-Glu-CTC-1-3 Sc: 58.5 TCCGTTGTGGTCTAGG..GGCtA.GGATTTGCCGCTCTCAgcttcgagagtcatctcactataagtg....CCGGCAAG...........G.CCCGGGTTCGATTCCCGG.CGACGGAA tRNA-Glu-CTC-1-5 Sc: 58.5 TCCGTTGTGGTCTAGG..GGCtA.GGATTTGCCGCTCTCAgataccagagcactcctcgcatcaagcg...CCGGCAAG...........G.CCCGGGTTCGATTCCCGG.CGACGGAA tRNA-Glu-CTC-1-6 Sc: 58.5 TCCGTTGTGGTCTAGG..GGCtA.GGATTTGCCGCTCTCAgcttcgagagtcatctcacttcgttcaagtgCCGGCAAG...........G.CCCGGGTTCGATTCCCGG.CGACGGAA tRNA-Glu-CTC-1-4 Sc: 58.4 >>>>>>>..>>>>...........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<.<<<<<<<. TCCGTTATGGTCTAGG..GGTtA.GGATTCTCCGCTTTCAagatctgcttgaatctcagtg..........CCGGAGCG...........G.CCCGGGTTCGATTCCCGG.TAACGGAA tRNA-Glu-TTC-1-1 Sc: 62.5 >>>>>>>..>>>.............<<<.>>>>........................................<<<<................>>>>>.......<<<<<.<<<<<<<. GACCCTATCGACAAGTCtGGTtA.AGTCATAACTCTTTCA...............................CTGTTAG............AtCCAGGGTTCAAATCCCTG.TGGGGTTA tRNA-Glu-TTC-2-1 Sc: 38.6
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...........................................................................................<<<<<....................>>>>>.......<<<<<<<<<<<<. GCGTTGGTGGTTTAGTGGT.A.AAATTCATCGTTGCCAcgtgactggataccatctgggaccccccagatgctccggccgctagtt....................................TCGATGAG...............C.CCCGGGTTCGATTCCCGGCCGACGCA tRNA-Gly-GCC-1-6 Sc: 60.2 GCGTTGGTGGTTTAGTGGT.A.AAATTCATCGTTGCCAtctgttgcagttccccaaggagcctccctcctgacaggactccctggagctcaacaccaacc......................TCGATGAG...............C.CCCGGGTTCGATTCCCGGCCGACGCA tRNA-Gly-GCC-1-5 Sc: 59.7 GCGTTGGTGGTTTAGTGGT.A.AAATTCATCGTTGCCAagagttgcatctcctcaaggagcacctccgtgaggaggcctccccggaggtcaacaccaagtc.....................TCGATGAG...............C.CCCGGGTTCGATTCCCGGCCGACGCA tRNA-Gly-GCC-1-4 Sc: 59.6 GCGTTGGTGGTTTAGTGGT.A.AAATTCATCGTTGCCAgccgttgccggtccgccaggagtcgcctcctcccaggagccctcccaggacctcaacaccacgtc...................TCGATGAG...............C.CCCGGGTTCGATTCCCGGCCGACGCA tRNA-Gly-GCC-1-8 Sc: 59.6 GCGTTGGTGGTTTAGTGGT.A.AAATTCATCGTTGCCAtttacggttgcagttcctcaaggagcaccccccctcaggggcctcccaggacctcaacaccatgtt..................TCGATGAG...............C.CCCGGGTTCGATTCCCGGCCGACGCA tRNA-Gly-GCC-1-1 Sc: 59.5 GCGTTGGTGGTTTAGTGGT.A.AAATTCATCGTTGCCAtaaaaagttgtatctccccaggagcatcccccctcagggcgggactccctggagctcaacaccatgtt................TCGATGAG...............C.CCCGGGTTCGATTCCCGGCCGACGCA tRNA-Gly-GCC-1-3 Sc: 59.5 GCGTTGGTGGTTTAGTGGT.A.AAATTCATCGTTGCCAtgcaaggttgtagcctccccaggagcagcccctgaaaaggggttctcccgagagctcaacaccatgtt................TCGATGAG...............C.CCCGGGTTCGATTCCCGGCCGACGCA tRNA-Gly-GCC-1-7 Sc: 59.5 GCGTTGGTGGTTTAGTGGT.A.AAATTCATCGTTGCCAgtagcagcacgtctcactcctcatcctggaatatcatcatgatggggctggacaggctgtatctatcaacc.............TCGATGAG...............C.CCCGGGTTCGATTCCCGGCCGACGCA tRNA-Gly-GCC-1-2 Sc: 59.3 >>>>>>>..>>>...........<<<.>>>>>...........................................................................................<<<<<....................>>>>>.......<<<<<<<<<<<<. GCACCAATGGTCTAGTGGTtA.TGATTTCACCTTCCCA....................................................................................AGGTGGAG...............A.GACGGGTTCGATTCCCGTTTGGTGCA tRNA-Gly-CCC-1-1 Sc: 67.7 >>>>>>>..>>>>.........<<<<.>.>>>...........................................................................................<<<.<..>>...........<<...>>>>>.......<<<<<<<<<<<<. GGCGAGGTGGCCGAGTGGTtA.TGGCGTAAGTTCCCCAcaccacgagcatcacctccaacattctctaacaacctcaataggctagtttcaggacatctctcaagggagttccgaagcggatTACTAGTGGAGC.......AATCCtCGTGGGTTCGAGTCCCACCCTCGTCA tRNA-Gly-CCC-2-1 Sc: 43.1 >>>>>>>..>>>>.........<<<<.>>>>>...........................................................................................<<<<<....................>>>>>.......<<<<<<<<<<<<. GCGCCGATGGTGTAATGGTtA.GCATTAATGCCTTCCAatctcgtagttattactacgacatgctct.......................................................AGCATTAG...............A.TTCGGGTTCGATTCCCGATCGGCGCA tRNA-Gly-TCC-1-1 Sc: 59.9
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>..............................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTGTTATGATCCAGGGGTA.GGATACATCGTTGTGGcagtccacgaaacaatc......CCGATGCA...........GCCTGGGTTCGATTCCCAGTAACGCCA tRNA-His-GTG-1-1 Sc: 50.7 GGTGTTATGATCAAGTGGTA.TGATACGTCGTTGTGGcttcaatagtccacgaaacaatcCCGATGCA...........GCCTGGGTTCGATTCCCAGTAACGCCA tRNA-His-GTG-2-1 Sc: 41.9
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCGCTTAGCTCAGTTGGTtA.GAGCGTGGTGCTAATActggcagtcctcttcgagaaatagcagtta.......ACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGACCA tRNA-Ile-AAT-1-1 Sc: 70.1 GGTCGCTTAGCTCAGTTGGTtA.GAGCGTGGTGCTAATActgacagccctttcagagggcttactgtta.......ACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGACCA tRNA-Ile-AAT-1-2 Sc: 70.1 GGTCGCTTAGCTCAGTTGGTtA.GAGCGTGGTGCTAATAtcagcagtcttcaaagaggactaagggtta.......ACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGACCA tRNA-Ile-AAT-1-3 Sc: 70.1 GGTCGCTTAGCTCAGTTGGTtA.GAGCGTGGTGCTAATAtcagcaatcctcttgaggaccaagagtta........ACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGACCA tRNA-Ile-AAT-1-4 Sc: 70.1 GGTCGCTTAGCTCAGTTGGTtA.GAGCGTGGTGCTAATAttggcagtcctccctgaggactcacgagttg......ACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGACCA tRNA-Ile-AAT-1-5 Sc: 70.0 >>>>>>>..>>>>..........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCCTTAGCTTAATAGGT.A.AAGCGCATTTTTGATA.....................................AGGATGTG...........A.TCGACGTTCAATTCGTCGAGGAATCA tRNA-Ile-GAT-1-1 Sc: 48.9 >>>>>>>..>>>>..........<<<<.>>>>..............................................<<<<................>>>>>.......<<<<<<<<<<<<. AGTCCTGTGACGCAGT.GGTtA.GCGTGTCGTTCTTATActcttcccagtgcgggaattgtatggccactgaggttATGCGAAA...........GtCGCGGGTTCAAATCCCGCCAGGACTA tRNA-Ile-TAT-1-1 Sc: 61.5
Leu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>........................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<. GGTGAGGTGGCCGAGTTGGTtA.TGGCGCCAGGTTAAGGtgtatcttaacagcaat................TCCTGGTGGGG..CAA........CCCGCGCGAGTTCGAGTCTCGT.CCTCATCA tRNA-Leu-AAG-1-1 Sc: 62.8 GGTGAGGTGGCCGAGTTGGTtA.TGGCGCCAGGTTAAGGtgtatcttaacaacgat................TCCTGGTGGGG..CAA........CCCGCGCGAGTTCGAGTCTCGT.CCTCATCA tRNA-Leu-AAG-1-2 Sc: 62.8 GGTGAGGTGGCCGAGTTGGTtA.TGGCGCCAGGTTAAGGtgtatcttaacagcaat................TCCTGGTGGGG..CAA........CCCGCGCGAGTTCGAGTCTCGT.CCTCATCA tRNA-Leu-AAG-1-3 Sc: 62.8 GGTGAGGTGGCCGAGTTGGTtA.TGGCGCCAGGTTAAGGtgtatcttaacagcaat................TCCTGGTGGGG..CAA........CCCGCGCGAGTTCGAGTCTCGT.CCTCATCA tRNA-Leu-AAG-1-4 Sc: 62.8 GGTGAGGTGGCCGAGTTGGTtA.TGGCGCCAGGTTAAGGtgtactcttaacaacaat...............TCCTGGTGGGG..CAA........CCCGCGCGAGTTCGAGTCTCGT.CCTCATCA tRNA-Leu-AAG-1-5 Sc: 62.8 >>>>>>>..>>>............<<<.>>>>>........................................<<<<<..>>...............<<..>>>>>.......<<<<<.<<<<<<<. GGGCAGGTGGCCGAGT.GGTtA.AGGCGCTACGTTTAGGtgaaaaaccata.....................CCGTAGT.GGGA...........AACCGCGTGCGTTCGAACCGCAC.CCTGCTCA tRNA-Leu-TAG-1-1 Sc: 59.0 >>>>>>>..>>>>..........<<<<.>>>>>........................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<. GGCAACGTGGCCGAGT.GGTtA.TGGCGGTAGACTCAAGtctcttggctgcttcaagcagtctgca......TTCTACT.GGAGC.........AATCCGCATGGGTTCGAGTCCCAT.CGTTGTCA tRNA-Leu-CAA-1-1 Sc: 61.3 >>>>>>>..>>>............<<<.>>>>>........................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<. GCCACGGTGGCCGAGT.GGTtA.AGGCGGCAGATTTAAGtcaatctgggctccccaggagctttctcttataCTCTGCT.ACAGA.........AATGTGCATGCGTTCGAACCGCAT.CCGTGGCA tRNA-Leu-TAA-1-1 Sc: 57.0
Lys tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>..............................<<<<.<................>>>>>.......<<<<<<<<<<<<. GCCCGGCTAGCTCAATCGGT.A.GAGCGTGAGACTCTTA.......................ATCTC.AAG...........GcTGCGGGTTCGACCCCCGCGTTGGGCT tRNA-Lys-CTT-1-1 Sc: 84.0 GCCCGGCTAGCTCAATCGGT.A.GAGCGTGAGACTCTTA.......................ATCTC.AAG...........GcTGCGGGTTCGACCCCCGCGTTGGGCT tRNA-Lys-CTT-1-3 Sc: 84.0 GCCCGGCTAGCTCAATCGGT.A.GAGCGTGAGACTCTTA.......................ATCTC.AAG...........GcTGCGGGTTCGACCCCCGCGTTGGGCT tRNA-Lys-CTT-1-4 Sc: 84.0 GCCCGGCTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAcgcctctcagaggtgcg......ATCTC.AAG...........GcTGCGGGTTCGACCCCCGCGTTGGGCT tRNA-Lys-CTT-1-2 Sc: 76.4 >>>>>>>..>>.>..........<.<<.>>>>>..............................<<<<.<................>>>>>.......<<<<<<<<<<<<. GCCCGGCTGGCACAATTGGTtA.GCGCGTAAGACTTTTAaaggctttagagcttgcaaagttATCTT.AAG...........GtTGGGAGTTCGAGCCTCCCGTCGGGCG tRNA-Lys-TTT-1-1 Sc: 69.0 >>>>>>>..>>>>..........<<<<.>>>>>..............................<<<<.<................>>>>>.......<<<<<<<<<<<<. AAGACCTTAGCTTAAT.GGT.A.AAGCATGTGCCTTTTA.......................AGCATtATA...........A.TATGGGTTCAAATCCCGTAGGTCTTA tRNA-Lys-TTT-2-1 Sc: 47.4
Met tRNAs
>>>>>>>..>>>............<<<....>>>.>.................................................................<<<<....................>>>>>.......<<<<<..<<<<<<<. GTCTCTGTGGTCTAGTCGGTtA.TGACG...TCG.GTCTCATAtttccatatgatctcttctgagaagagagga.........................ATCCGAAG...............GtCCGCAGTTCGATTCTGCG..TAGGGACA tRNA-Met-CAT-1-2 Sc: 66.6 GTCTCTGTGGTCTAGTCGGTtA.TGACG...TCG.GTCTCATAttccttgaatgtgacctcttcccagaagtggca.......................ATCCGAAG...............GtCCGCAGTTCGATTCTGCG..TAGGGACA tRNA-Met-CAT-1-1 Sc: 66.5 >>>>>>>..>>>>..........<<<<....>>>.>>...............................................................<<<<<....................>>>>>.......<<<<<..<<<<<<<. AGCTGAATGGCGCAGC.GGA.A.GCGCG...CCG.GGCTCATA........................................................ACCCGGAG...............GaCAGTGGATCGAAACCACT..TTCAGCTA tRNA-iMet-CAT-1-1 Sc: 66.4 >>>>>>>..>>>............<<<....>>>.>.................................................................<<<<....................>>>>>.......<<<<<..<<<<<<<. GTCTCTGTGGTCTAGTCGGTtA.TGACG...TCG.GTCTCATAttcatccacaatatgatctcttcgcagaagagtgac....................ATCCGAAG...............GtCCGCAGTTCGATTCTGCG..TAGGGACA tRNA-Met-CAT-1-3 Sc: 66.4 >>>>>>>..>>>>..........<<<<....>>>.>>...............................................................<<<<<....................>>>>>.......<<<<<..<<<<<<<. GCCAGGATAGTTCAATTGGTtA.GAACG...TTA.ATTTCATG........................................................CATTAAGA...............A.TGAGAATTCGAGTTTCTC..TCCTGGCT tRNA-Met-CAT-2-1 Sc: 47.2 >>>>>>>...>>>..........<<<.....>>..>>...............................................................<<.<<....................>>>>>.......<<<<<..<<<<<<<. AGCTGCGTGGCGCAGC.GGA.A.GCGGTaagCTA.CCCTCATGcaccacaagacttgaacaaattcactaacaaccatcatagcgccgggctcataaccCGGAGGA..................CAATGGATCGAAACCATT..CGCAGCTA tRNA-iMet-CAT-2-1 Sc: 21.8 >>>>>>>...>>>..........<<<.....>.>..>...............................................................<.<.<....>>.......<<.....>>>>>.......<<<<<..<<<<<<<. AGCTGCGTGGCGCAGC.GGA.A.GCGGT...AAGtCATTGCTActgttcacattcagtaatgtccagtgtactaacgaccttcacagcgccggg.....CT.CATA.ACCC.......GGAGGaCAATGGATCGAAACCATT..CGCAGCTA tRNA-Met-CAT-3-1 Sc: 21.7
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>............................................<<<<................>>>>>.......<<<<<<<<<<<<. GCCCAAGAAGCTCAATCGGTAGAGCGGAACTCTGAAG...................................ATGTTTAG...........GtTATAAGTTCGAATCTTATCTTGGGCA tRNA-Phe-GAA-2-1 Sc: 61.4 >>>>>>>..>>>>........<<<<.>>>>>..........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCAGCTTTAGCTCACTTGGGAGAGCGCCAGACTGAAGtctacttcagcctaaatagccatctgtgcggt...ATCTGGAG...........GtACTGTGTTCGATCCACAGAAGCTGCA tRNA-Phe-GAA-1-2 Sc: 59.1 GCAGCTTTAGCTCACTTGGGAGAGCGCCAGACTGAAGtcaacttcagccataagctagccactctgtgcggtATCTGGAG...........GtACTGTGTTCGATCCACAGAAGCTGCA tRNA-Phe-GAA-1-1 Sc: 59.0
Pro tRNAs
>..>>>>>>>...........<<<.>>>>>......................<<<<<................>>>>>.......<<<<<...<<<<..<. GAATCCAGTCTAGTGGTtA.CGATTCTCGCTTTGGGagctttcttctgaacTGCGAGAG...........GtCCCGCGTTCGACTCGCGG..cTGGGCCC. tRNA-Pro-TGG-1-1 Sc: 21.3
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>......................<<<......>.>>>>......................................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCGCTGTGGCGGA.........GT.GGTt.A.ACGCG.....A.CAGACTAGAA...............................................................................ATCTGTT.TCCTTC.......GGGAG.CGCAGGTTCGAGTCCTGC.CGGCGTCG tRNA-Ser-AGA-2-1 Sc: 76.0 GGCGCTGTGGCGGA.........GT.GGTt.A.ACGCG.....A.CAGACTAGAA...............................................................................ATCTGTT.TCCTTC.......GGGAG.CGCAGGTTCGAGTCCTGC.CGGCGTCG tRNA-Ser-AGA-2-2 Sc: 76.0 GGCGTTGTGGCGGA.........GT.GGTt.A.ACGCG.....A.CAGACTAGAA...............................................................................ATCTGTT.TCCTTC.......GGGAG.CGCAGGTTCGAGTCCTGC.CGACGTCG tRNA-Ser-AGA-1-1 Sc: 75.8 .>>.>>>...>........................<.......>.>>>>......................................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<.<<.. AACATCGATACTGAtaatctaccAG.GGTt.A.ACGCG.....A.CAGACTAGAA...............................................................................ATCTGTT.TCCTTC.......GGGAG.CGCAGGTTCGAATCCTGC.CGACGTCG tRNA-Ser-AGA-3-1 Sc: 23.0 >>>>>>>..>>>......................<<<......>.>>>>......................................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCACAGTGCCTGA.........GT.GGTt.A.AAGGG.....T.GTGACTCGAAtctccgaccaccgtcccctcccccccaagggaaggacccgacgccgtcgagataaatcagat.................ATCACAT.GGCTTC.......GGCCG.CGCAAGTTCGAATCTTGT.CTGTGTCG tRNA-Ser-CGA-1-1 Sc: 63.3 GGCGCAGTGCCAGA.........GTTGGTt.A.ATGGG.....T.GTGACTCGAAtgcgctcttcccaatctgtacaagcagacggaacgagttagctgcgat...............................ATCACAT.GGCTTC.......GGCCG.CGCAAGTTCGAATCTTGT.CTGCGTCG tRNA-Ser-CGA-2-1 Sc: 61.2 >>>>>>>....>>....................<<........>.>.>........................................................................................<.<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<. GGCACAGTGCCAGA.........GT.GGTgtG.TTACT.....TcCTGCCTGCCGtctccgatctttcactaacagtccctaggttaatgggtcagacttgaatgcaacgcatttggtc...............ATCTGATGGCTT.........CGGCCtCGCAAGTTCGAATCTTGT.CTGTGTCG tRNA-Ser-TGA-1-1 Sc: 27.6 >>>>>>>..>>>>....................<<<<......>.>>.>......................................................................................<.<<<..>...............<...>>>>>.......<<<<<.<<<<<<<. GGGAAGATGGCCGA.........GC.GGTt.A.TGGCGtaagtG.ACCACTACAAcactcagccatcgatcatgacctaacaattaccaggctagtttcaggtcttctgaaaagagtcccgaagatagggtttaCTAGTTGGGTA...........ACCTtCGTGGGTTCGAGTCCCAC.TCTTCTCA tRNA-Ser-ACT-1-1 Sc: 35.4 >>>>>>>...>>>....................<<<.......>.>>.>......................................................................................<.<<<..>.>...........<.<...>>>>>.......<<<<<.<<<<<<<. GGTGGTGTGGTGTA.........GT.GGT....GTAAG.....T.TGCCTTGGTTactaaatactttaacaaaggctaatcccctacatagagcacgtaacgttgtggctgtaaagca................AGACAACTCCGT.........TCCGA.CCTGGGTTCGATTCCCAG.CACTGCCA tRNA-Ser-ACT-2-1 Sc: 23.8 >>>>>>>..>>>......................<<<......>.>>>>......................................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCACTTTGGCGGA.........GT.GGTt.A.ACGCG.....C.TGGCCTGCTActtctggacaggagaagctgat.........................................................AGCCAGT.TCCTTC.......GGGAG.CGTGAGTTCGAATCTCAC.AGGTGTCG tRNA-Ser-GCT-1-2 Sc: 65.6 GGCACTTTGGCGGA.........GT.GGTt.A.ACGCG.....C.TGGCCTGCTAcaatttgcatcccccaacgaccccttacccctgacggtggagggccgggcacgggatggtagctgtat...........AGCCAGT.TCCTTC.......GGGAG.CGTGAGTTCGAATCTCAC.AGGTGTCG tRNA-Ser-GCT-1-1 Sc: 63.8
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.....................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCTTTAGCTCAGT.GGT.A.GAGCGCGACACTAGTA............................................................................................A..TGTCGAG...........GcCATCGGTTCGACTCCGATAGGGGGCA tRNA-Thr-AGT-2-1 Sc: 83.0 GCCCCTTTAGCTCAGT.GGT.A.GAGCGCGACACTAGTA............................................................................................A..TGTCGAG...........GcCATCGGTTCGACTCCGATAGGGGGCA tRNA-Thr-AGT-2-2 Sc: 83.0 GCCCCTTTAGCTCAGT.GGT.A.GAGCGCGACACTAGTA............................................................................................A..TGTCGAG...........GcCATCGGTTCGACTCCGATAGGGGGCA tRNA-Thr-AGT-2-3 Sc: 83.0 GCTTCTATGGCTCAGTTGGT.A.GAGCGCGGCACTAGTAgctgatccccatcagtc...........................................................................A..TGCCGAG...........GtCCTGAGTTCAAATCTCAGTGGAAGCA tRNA-Thr-AGT-1-1 Sc: 78.0 GCAGCTTTAGCTCACTTGGG.A.GAGCGCCAGGTTAGTCctactcagccttcatcgtctctcgactccccgctaacaagcagcagactgaagtcaacttcggccaacgccatccacagtattctgtgcggtA..TCTGGAG...........GtACTGTGTTCGATCCACAGAAGCTGCA tRNA-Thr-AGT-3-1 Sc: 44.7 >>>>>>>..>>>............<<<.>>>>>.....................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGCATGGCTTAGT.GGT.A.CAGCGTCGCACTCGTAacaaaaacggta................................................................................A..TGCGAAG...........AtCCCTGGTTCGATTCCGGGTGTGGGCA tRNA-Thr-CGT-1-1 Sc: 70.7 GCCCGCATGGCTTAGT.GGT.A.CAGCGTCGCACTCGTAtgacacatgca.................................................................................A..TGCGAAG...........AtCCCTCGTTCGATTCGGGGTGTGGGCA tRNA-Thr-CGT-2-1 Sc: 64.0 >>>>>>>..>>>>..........<<<<.>>>>>.....................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCGTTATGGTCTAGG.GGTtA.GGATTCTCCG..TACGttcctcccgccggctccaccatcagcgcgacgcatcgactaacgaccagccaggctttcaagatcgcttgaacttcagtg............C..CGGAGCG...........G.CCCGGGTTCGATTCCCGGTAACGGAA tRNA-Thr-CGT-3-1 Sc: 43.9 >>>>>>>..>>>............<<<.>>>>>.....................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCTATGGCGCAGT.GGT.A.ACGCGTCGCACTTGTAtttcccaacaatatgca...........................................................................A..TGCGAAG...........AtCCTGGGTTCAACTCCCAGTGGAGGCA tRNA-Thr-TGT-1-1 Sc: 72.4 >>>>>>>..>>>>..........<<<<..>>>.......................................................................................................<<<.................>>>>>.......<<<<<<<<<<<<. GCCTGGTTTGCATAAT.AGT.A.ATGCACCCGTTTTGTA............................................................................................A..TCGGAAG...........A.TATGAGTGCAAATCTCGTACTGGGCT tRNA-Thr-TGT-2-1 Sc: 29.0
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>..................<<<<<..>>>>........<<<<...>>>>>.......<<<<<<<<<<<<. GGGGGTGTGGCGCAACGGTA.GCGCGTCAGATTCCAGtgatcattacgATCTGGAGCTTCC......TGAAGGcTGTGCGTTCAAATCGCACCATCCTCA tRNA-Trp-CCA-1-1 Sc: 59.6
Tyr tRNAs
>>>>>>>............>>>.............<<<.>>>>>.................................................<<<<<................>>>>>.......<<<<<...<<<<<<<. CTCCGCT..........TGGTGTA.GTTGGTtcATCACGTTCGACTGTAAtatctgttgcc...............................ATCGAAAG...........GtCCCTAGTTCGATTCTGGG...AGCGGAGA tRNA-Tyr-GTA-2-1 Sc: 71.7 CTCCGCT..........TGGTGTA.GTTGGTttATCACGTTTGACTGTAAtatctatcactctccccgagagtatgagcatgtatatgcc..ATCAAAAG...........GtCCCTAGTTCGATTCTGGG...AGCGGAGA tRNA-Tyr-GTA-1-1 Sc: 71.0 CTCCGTT..........TGGTCTA.GTTGGTttATGACATTTGACTGTAAtatctctcatgattctttgcc.....................ATCAAAGG...........GtCCCTAGTTCGATTCTGGG...AACGGAGA tRNA-Tyr-GTA-4-1 Sc: 67.9 CTCCGCT..........TGGTGTA.GTTGGCtcATCACGTTCGACTGTAAtatctcgactgcctgtgaggcctcacagcgcatgcatatgccATCGAAAG...........GtCCCTAGTTCGATTCTGGG...AGCGGAGA tRNA-Tyr-GTA-3-1 Sc: 66.1 >>>.>.>.............>>.............<<..>>>>>.................................................<<<<<................>>>>>.......<<<<<...<.<.<<<. GTCACGGgaaattcaaa.ATTGTAtGTTGGTttATCACGTTCGACTGTAAtatctgttcatatgcc..........................ATCGAAAG...........GtCCCTAGTTCGATTCTGGG.agCGGAGACA tRNA-Tyr-GTA-5-1 Sc: 26.9
Val tRNAs
>>>>>>>..>>>.............<<<.>>>>>...................................................................<<<<<................>>>>>.......<<<<<...<<<<<<<. GCGATGGTGGTGTAGTTGGTttA.TCACATTTGTCTAACAttggagctcaattacaggctccgatagac...............................CACAAAAG...........GtCCCGGGTTCAAGTCCCGG...CCGTCGTA tRNA-Val-AAC-3-1 Sc: 64.9 GCGATGGTGGTGTAGTTGGTt.A.TCACGTTTGTCTAACAcgtgacgccctcaaaggggttacatgtggtg.............................CACAAAAG...........GtCCTGGGTTCAAGTCCCGG...CCGTCGTA tRNA-Val-AAC-1-1 Sc: 64.3 GCGATGGTGGTGTAGTTGGTt.A.TCACGTCAGTCTAACAgaggagcctcgaccgagcatcgtcaaccacgagttcacgagtccctggtagtt.......CACTGAAG...........GtCCTGGGTTCAAGTCCCGG...CCGTCGTA tRNA-Val-AAC-2-1 Sc: 63.2 GCGATGGTGGTGTAGTTGGTt.A.TCACGTCAGTCTAACAgaggagcctcatggcagcctgatcagtgatcaggcacgagtccacgagtccctggtagtcCACTGAAG...........GtCCTGGGTTCAAGTCCCGG...CCGTCGTA tRNA-Val-AAC-2-2 Sc: 62.9 >>.>>>>..>>.>...........<.<<.>>>>>...................................................................<<<<<................>>>>>.......<<<<<...<<<<.<<. GTTCGGC.AGTTGAGTTGGTt.A.TCACGTCAGTCTAACAggaggcctcgtccgagcatcgtcaaccacgagttcatgagtccctggtggtc........CACTGAAG...........GtCCTGGGTTCAAGTCCCGG.ccGTCGTACA tRNA-Val-AAC-4-1 Sc: 35.8 >>>>>>>..>>>.............<<<.>>>>>...................................................................<<<<<................>>>>>.......<<<<<...<<<<<<<. GCGGCCATGGCCTAGT.GGTt.A.TGGCGTCAGTCTTACAgtcagccgatcttcgattgccgcactgctta.............................CACTGAAG...........GtCGGTGGTTCGATCCCGCC...TGGCCGTA tRNA-Val-TAC-1-1 Sc: 69.9 >>>>>>>..>>>>...........<<<<.>>>>>...................................................................<<<<<................>>>>>.......<<<<<...<<<<<<<. AAGGAATTAGCTCAATTGGT..A.GAGCGTCTATCTTACA............................................................CATAGACG...........GtTAAAGGTTCGAATCCTTT...ATTCCTTA tRNA-Val-TAC-2-1 Sc: 57.4