tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 115
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 5
Predicted pseudogenes 9
Total tRNAs 129
Intron Summary (tRNAs with introns: 93)
Ala AGC
3
Ala CGC
2
Ala TGC
1
Gly GCC
8
Gly CCC
1
Gly TCC
1
Pro TGG
1
Thr AGT
2
Thr CGT
3
Thr TGT
1
Val AAC
5
Val TAC
1
Ser CGA
2
Ser TGA
1
Ser ACT
2
Ser GCT
2
Arg CCG
1
Arg TCG
2
Arg CCT
1
Leu AAG
5
Leu TAG
1
Leu CAA
1
Leu TAA
1
Phe GAA
2
Asn GTT
4
Lys CTT
1
Lys TTT
1
Asp GTC
5
Glu CTC
6
Glu TTC
1
His GTG
2
Gln CTG
4
Gln TTG
2
Ile AAT
5
Ile TAT
1
Met CAT
3
Tyr GTA
5
Cys GCA
2
Trp CCA
1
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 75603

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
3
GGC
 
CGC
2
TGC
2
7
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
8
CCC
2
TCC
1
11
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
 
GGG
 
CGG
 
TGG
1
1
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
5
GGT
 
CGT
3
TGT
2
10
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
5
GAC
 
CAC
 
TAC
2
7
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
4
GGA
 
CGA
2
TGA
1
ACT
2
GCT
2
 
 
 
 
11
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
5
GCG
 
CCG
1
TCG
2
 
 
 
 
CCT
1
TCT
3
12
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
5
GAG
 
CAG
 
TAG
1
 
 
 
 
CAA
1
TAA
1
8
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
3
 
 
 
 
3
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
5
 
 
 
 
5
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
4
TTT
2
6
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
5
 
 
 
 
5
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
6
TTC
2
8
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
2
 
 
 
 
2
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
4
TTG
2
6
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
5
GAT
1
 
 
TAT
1
7
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
2/5
 
 
7
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
5
 
 
 
 
5
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
2
 
 
 
 
2
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
1
 
 
1
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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