Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>..........<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCAATTGGTCTAGTGGTA.TGATTTCCGCTTCGCAtgtcgacttgtcgagtgacat....TGTGGAAG...........GtCACCGGTTCAATCCCGGTATTGTCCA tRNA-Ala-CGC-1-1 Sc: 57.5 GGGCAATTGGTCTAGGGGTA.TGATTTTCGCTTCGCAttccgcagatgcgcct.........TGTGAAAG...........GtCACCGGTTCGAATCCGGTATTGTCCA tRNA-Ala-CGC-2-2 Sc: 54.8 GGGCAATTGGTCTAGGGGTA.TGATTTTCGCTTCGCAttccatagatgcgccaat.......TGTGAAAG...........GtCACCGGTTCGAATCCGGTATTGTCCA tRNA-Ala-CGC-2-1 Sc: 54.7 GGGCAATTGGTCTAGGGGTA.TGATTTTCGCTTCGCAttgttgctcgatgcgcct.......TGTGAAAG...........GtCACCGGTTCGAATCCGGTATTGTCCA tRNA-Ala-CGC-2-3 Sc: 54.7 GGGCTATTGGTCTAGGGGTA.TGATTTTCGCTTCGCAttgtgcaatgcgcct..........TGTGAAAG...........GtCACCGGTTCAAATCCGGTATAGTCCA tRNA-Ala-CGC-3-1 Sc: 54.7 >>>>>>>..>>>>........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGGATAGTTCAGTGGTA.GAATATCTGTTTTGCAatgccttgtttatggcgcccgcttaTACAGAAG...........GtCCCGTGTTCAATCCACGGTTCGTCCA tRNA-Ala-TGC-1-1 Sc: 64.4 >>>>>>>..>>>..........<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGTGCATGGTCTAGTGGTA.TGATTTCTGTTTTGCAttgaaatttctatcttgctc.....TACAGACG...........GtCCCGCGTTCGATCCGCGGTGCATCCA tRNA-Ala-TGC-3-1 Sc: 58.0 GGGTGCATGGTCTAGTGGTA.TGATTTCTGTTTTGCAttgaaatttctatcttgctc.....TACAGACG...........GtCCCGCGTTCGATCCGCGGTGCATCCA tRNA-Ala-TGC-3-2 Sc: 58.0 GGGCTAATGGTCTAGTGGTA.TGATTTCTGTTTTGCAatgcttcattggatc..........TACAGACG...........GtCCCGCGTTCAATCCGCGGTTAGTCCA tRNA-Ala-TGC-2-1 Sc: 57.3
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>..............................................................................................................................<<<<<................>>>.>>.......<<<<<<<<<<<<. GGCCGTTTGGCGCAATTGGT.A.GCGCGTTACTTTCCGG.......................................................................................................................TGGTAAAG...........GtTCTG.GGTTCGAGTCCCAGGATGGTCG tRNA-Arg-CCG-1-1 Sc: 64.0 GGCCGTTTGGCGCAAC.GGT.A.GCGCGTTACTTTCCGG.......................................................................................................................TGGTAAAG...........GcTCTG.GGTTCGAGTCCCAGGATGGTCG tRNA-Arg-CCG-2-1 Sc: 61.1 GGCCGTTTGGCGCAAC.GGT.A.GCGCGTTACTTTCCGG.......................................................................................................................TGGTAAAG...........GcTCTG.GGTTCGAGTCCCAGGATGGTCG tRNA-Arg-CCG-2-2 Sc: 61.1 >>>>>>>..>>>............<<<.>>>>>..............................................................................................................................<<<<<................>>>.>>.......<<<<<<<<<<<<. GGCCCGCTGGCCAAAT.GGT.A.AGGCGTCAGATTTCGGttttctatcaaaaacaagaaactct..............................................................................................CTCTGAAG...........AtTGGG.CGTTCGAGCCGCCCGTGGGTCG tRNA-Arg-TCG-2-1 Sc: 56.2 >>>>>>>..>>>>..........<<<<.>>>>>..............................................................................................................................<<<<<................>>>.>>.......<<<<<<<<<<<<. GGCCCATTGGCCTAAT.GGCtA.AGGCGTCAGATTTCGG.......................................................................................................................CTCTGAAG...........AtTGCG.CGTTCGAGTCGCGTGTGGGTCG tRNA-Arg-TCG-1-1 Sc: 53.3 >>>>>>>..>>>............<<<.>>>>>..............................................................................................................................<<<<<................>>>.>>.......<<<<<<<<<<<<. GTGCGGTTGGCGCAGT.GGTcA.ACGCGTTCGCTCCCTAaaagggcttaagcaaccctttcagtgtcgaaaacggcaccgaatcttacctgtagtgctagcagacacactagcacagcttacaagtgagaccgagtctgggggaccaagccagggaacAGTGAAAG...........AtCCCG.GGTTCGAATCCCGGACCGCACA tRNA-Arg-CCT-2-1 Sc: 60.7 >>>>>>>..>>>>..........<<<<.>>>>>..............................................................................................................................<<<<<................>>>.>>.......<<<<<<<<<<<<. GTGCGGTTGGCGTAGT.GGTcA.ACGCGTTCGCTCCCTAaaaggtgttggcaaccttcagtgtcgaaaacggcaccggttcgtacctatacttacctttggctatgagggactgggggcaccaaactaaagggaaac.....................AGTGAAAG...........AtCCCG.GGTTCGAATCCCGGACCGCGCA tRNA-Arg-CCT-3-1 Sc: 58.1 GGTCCGGTGGCGAAAT.GGT.A.TCGTGTGGTCCTCCTAattcgggaggata..........................................................................................................AGACTGAG...........GtTGTG.GGTTCGAGTCCCATCCGGATCG tRNA-Arg-CCT-1-1 Sc: 46.5 GGTCCGGTGGCGAAAT.GGT.A.TCGTGTGGTCCTCCTAattcgggaggata..........................................................................................................AGACTGAG...........GtTGTG.GGTTCGAGTCCCATCCGGATCG tRNA-Arg-CCT-1-2 Sc: 46.5 GGTCCGGTGGCGAAAT.GGT.A.TCGTGTGGTCCTCCTAattcgggaggata..........................................................................................................AGACTGAG...........GtTGTG.GGTTCGAGTCCCATCCGGATCG tRNA-Arg-CCT-1-3 Sc: 46.5 >.>.>>>..>>>>..........<<<<.>>>..................................................................................................................................<<<................>>>.>>.......<<<<<<<<.<.<. GGCTCCTTGGTGTAGT.GGT.A.GCACAGCCC.TTGACGtctgctcctaagccaaaggtaaggccggatatacggcggg...............................................................................AC.GGCAG...........G.CCTCaGGTTCGACCCCGAGAGGTGGCA tRNA-Arg-CCT-4-1 Sc: 23.8 >>>>>>>..>>>>..........<<<<.>>>>>..............................................................................................................................<<<<<................>>>.>>.......<<<<<<<<<<<<. GCCCGGCTGGCGCAATCGGT.A.GCGCGCAAGACTTCTA.......................................................................................................................ATCTTGAG...........GcTGTG.GGTTCGATTCCCACGTCGGGCT tRNA-Arg-TCT-2-1 Sc: 86.1 GCCCGGCTGGCGCAATCGGT.A.GCGCGCAAGACTTCTA.......................................................................................................................ATCTTGAG...........GcTGTG.GGTTCGATTCCCACGTCGGGCT tRNA-Arg-TCT-2-2 Sc: 86.1 GCCCGGCTGGCGCAATCGGT.A.GCGCGCAAGACTTCTA.......................................................................................................................ATCTTGAG...........GcTGTG.GGTTCGAGTCCCACGTTGGGCT tRNA-Arg-TCT-1-2 Sc: 84.2 GCCCGGCTGGCGCAATCGGT.A.GCGCGCAAGACTTCTAttctccttcgagatcgca.....................................................................................................ATCTTGAG...........GcTGTG.GGTTCGAGTCCCACGTTGGGCT tRNA-Arg-TCT-1-1 Sc: 76.6 >>>>>>>..>>>............<<<..>>>>..............................................................................................................................<<<<.................>>>.>>.......<<<<<<<<<<<<. GCCGTCGTAGAGAAAT.GGT.A.ACTCGTCAGACTTCTA.......................................................................................................................ATCTGTAG...........AcTGCA.GGTTCGAGTCCTGCCGGCGGCG tRNA-Arg-TCT-3-1 Sc: 62.1
Asn tRNAs
Asp tRNAs
Cys tRNAs
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...............................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTGCGGTTGGCGCAGTGGTcA.GCGCGTTCACTCCTGAaactggggttttcgggctcatctatcctggaggggtggcagcacgcctccatactgaaaaccaccaggtggcTGTGAAAG...........GaCCCGGGTTCGAATCCCGGACCGCACA tRNA-Gln-CTG-2-1 Sc: 65.5 >>>...>..>>>...........<<<.>>>>>...............................................................................<<<<<................>>>>>.......<<<<<<...<<<. GCT...TTAGTGTAGCGGTtA.TCACTTCGGATTCTGAtacaaaaatctcctacagc.....................................................TTCCGACA...........A.CCCTGGTTCGATTCCAGGATCGAGCT tRNA-Gln-CTG-1-1 Sc: 38.3 >>>>>>>..>>>...........<<<.>>>>>...............................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTGTGTAGTGTAGTGGTtA.TCACTCTGGATTTTGAagcacattcaaattc.........................................................TTCCAGTA...........A.CCCCGGTTCGAACCCGGGCACGACCT tRNA-Gln-TTG-1-2 Sc: 63.4 GGTTGTGTAGTGTAGTGGTtA.TCACTCTGGATTTTGAaacttcaaaaccttcaattc....................................................TTCCAGTA...........A.CCCCGGTTCGAACCCGGGCACGACCT tRNA-Gln-TTG-1-1 Sc: 63.2
Glu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. ACCCTACTGGTGTATC.GGTt.A.ACATGGCGGA...TTCTCAttcttgcgatgaagt.......................................................................T.TCCGCAG...........C.GCAGGGTTCAACTCCCTGGTAGGGTA tRNA-Glu-CTC-1-1 Sc: 39.5 ACCCCGCTGGTGTAGC.GGTttA.ACGCGGCGGT...TACTCGcaaacgctatcgactatacatcg...............................................................T.GCCGCAG...........A.CTAGGGTTCGAGTCCCTGGCGGGGTA tRNA-Glu-CTC-3-1 Sc: 32.9 >>>>>.>..>>>>...........<<<<.>>>>>.................................................................................................<<<<<................>>>>>.......<<<<<<.<<<<<. ACCCTACTGGTGTATC.GGTt.A.ACATGGCGGA...TTCTCAaactcttacccacaaagtccaagtc.............................................................T.TCCGCAG...........C.GCAGGGTTCAACTCCCTGGCGGGGTA tRNA-Glu-CTC-2-1 Sc: 28.9 >>>>>>>..>>>>...........<<<<.>>>>>.................................................................................................<<<<<................>>>.>.......<.<<<<<<<<<<. ATCTTACTGGTGTATC.GGTt.A.ACATGGCGGA...TTCTCAaatcttgtgatcaagt......................................................................T.TCCGCAG...........C.GCAGCGTTCAACTCCCTGGTAGGGTA tRNA-Glu-CTC-4-1 Sc: 21.9 >>>>>>>..>>>>...........<<<<.>>>>>.................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCATGTAGTGCAGA.GGTttA.GCATACTGGG...TTTTCAccttccacagtggaat......................................................................C.CCCAGAG...........A.CCCGGGTTCGAACCCCGGCGTGGGAA tRNA-Glu-TTC-2-1 Sc: 64.0 TCCTATATAGTGCAGA.GGTttA.GCATACTGGA...TTTTCAccttccacagtggatt......................................................................C.TCCAGAG...........A.CCCGGGTTCGAACCCCGGTGTGGGAA tRNA-Glu-TTC-3-1 Sc: 63.2 TCCGGTATAGTGTAAC.GGTt.A.ACATATCGCG...TTTTCA......................................................................................C.CGCGAAG...........C.TCGGGGTTCGATTCCCCGTACCGGAG tRNA-Glu-TTC-1-1 Sc: 61.9 TCCGGTATAGTGTAAC.GGTt.A.ACATATCGCG...TTTTCA......................................................................................C.CGCGAAG...........C.TCGGGGTTCGATTCCCCGTACCGGAG tRNA-Glu-TTC-1-2 Sc: 61.9 TCCGGTATAGTGTAAC.GGTt.A.ACATATCGCG...TTTTCA......................................................................................C.CGCGAAG...........C.TCGGGGTTCGATTCCCCGTACCGGAG tRNA-Glu-TTC-1-3 Sc: 61.9 TCCGGTATAGTGTAAC.GGTt.A.ACATATCGCG...TTTTCA......................................................................................C.CGCGAAG...........C.TCGGGGTTCGATTCCCCGTACCGGAG tRNA-Glu-TTC-1-4 Sc: 61.9 GCGCGGTTGGCTCAGTCGGT..A.GAGCGTTAGCccgTTCGCAagtgatcgtaccgagggccctagggactcaaatgcctactaagctcgtctactaggggagcggtgcaagtgagggtcacgaacgatAgGCTAGAG...........GtCACAGGTTCGAGTCCTGTACCGCGTA tRNA-Glu-TTC-4-1 Sc: 55.7
Gly tRNAs
>>>>>>>..>>.>..........<.<<.>>..>>>..........................................<<<<<...............>>>>>.......<<<<<<<<<<.<<. GCGCCGTTGGTATAGTGGTt.A.GCATACT..CGCTTCCCAagaaatcctctaatt....................AGCGAGTG...........ACCCGAGTTCGAATCTCGGACGGC.GCA tRNA-Gly-CCC-2-1 Sc: 62.8 GCGCCGATGGTATAGTGGTt.A.GCATCCT..CGCTTCCCAaactcctttggaacc....................AGCGAGGG...........ACCCGGGTTCGAACCCCGGTCGGC.GCA tRNA-Gly-CCC-1-1 Sc: 61.2 >>>>>>>..>>>>..........<<<<.>>..>>>..........................................<<<<<...............>>>>>.......<<<<<<<<<<.<<. GCGCGGTTAGTATAGTGGTc.A.GTACTCT..CGTTCCCCAaacgccgctgtcaaggacccaaaagaggttaatcaAACGAGCG...........ACCCGGGTTCGATTCCCGGACTGC.GCA tRNA-Gly-CCC-3-1 Sc: 58.3 GCGCAGTTAGTATAGTGGCttA.GTACTCT..CGTTTCCCAatactggaagat.......................AACGAGTG...........ACTCGGGTTCGAACCCCGGACTGC.GCA tRNA-Gly-CCC-4-1 Sc: 53.3 >>>>>>>..>>>>..........<<<<..>..>>>..........................................<<<<................>>>>>.......<<<<<<<<<<.<<. GCGCGGTTAGTATAGCGGTc.A.GTACTCT..CGTTTCCCAacaagtggctcatggcaaagat.............AACGATTG...........ACCCGGGTTCGACTCCCGGACTGC.GCA tRNA-Gly-CCC-5-1 Sc: 51.3 >>>>>>>..>>>>..........<<<<.>>..>>>..........................................<<<<<...............>>>>>.......<<<<<<<<<<.<<. GCGCGGTTAGTATAGCGGTc.A.GTACTCTcaCGTTTCCCAgtgagggttggatcccaaagaagagt.........AACGAGTG...........ACCCGGGTTCGACTCCCGGACTGCcGCA tRNA-Gly-CCC-7-1 Sc: 42.4 GTTAGAGTGGAGTAGTAGTttA.ACTCGTC..GCCCTCCCAaactgatcccgaaagggtgaggcaaggagattc..AGGCGGAG...........ACCCGGGTGCGAATCCCGGCTCTA.GCA tRNA-Gly-CCC-8-1 Sc: 40.2 .....>>..>>>>..........<<<<.>>..>>>..........................................<<<<<...............>>>>>.......<<<<<<<....... GCGCGGTTAGTATAGCGGTc.A.GTACTCT..CGTTTCCCAatcagtgtcccatgggtaaagaat...........AACGAGTG...........ACCCGGGTTCGACTCCCGGACNNN.NNN tRNA-Gly-CCC-6-1 Sc: 36.3 >>>>.>>...>>>..........<<<..>>..>>>..........................................<<<<<...............>>>>.........<<<<<<.<<.<<. ACCCGACTGTTGTAGCGGTt.A.ACATGGC..GGATTCCCAagctcaagaaagtacagtaaagc............TTCCGCAG...........CGCAGGGTTCAACTGCCTGGTGGG.GTA tRNA-Gly-CCC-9-1 Sc: 23.4 >>>>>>>..>>>>..........<<<<.>>..>>>..........................................<<<<<...............>>>>>.......<<<<<<<<<<.<<. GCGCCAATGGTCTAGTGGTt.A.GGATTCA..ACCCTTCCA...................................AGGTTGAG...........GGGGGGGTTCGATTCCCTCTTGGC.GCA tRNA-Gly-TCC-1-1 Sc: 67.5 GCGCCAATGGTCTAACGGCt.A.GGATTCA..TCCCTTCCA...................................AGGATGAG...........GTGGGGGTTCGATTCCCTCTTGGC.GCA tRNA-Gly-TCC-2-1 Sc: 60.4 GCGCCAATGGTCTAACGGCt.A.GGATTCA..TCCCTTCCA...................................AGGATGAG...........GTGGGGGTTCGATTCCCTCTTGGC.GCA tRNA-Gly-TCC-2-2 Sc: 60.4 >>>>>>>..>>>>..........<<<<.>>..>>............................................<<<<...............>>>>>.......<<<<<<<<<<.<<. GCGCGGTTGGCGTAGAGGTttA.ACGCACC..CGCCTTCCAaggtctgagatcttccaggtgagga..........ACCGGGGG...........ACCCGGGTTCGAACCCCGGACCGC.GCA tRNA-Gly-TCC-3-1 Sc: 57.3
His tRNAs
>>>>.>>..>>>>........<<<<.>>>.>...............................<.<<<...............>>>>>.......<<<<<<<.<<<<. GGCCCGTTGGTGTAATGGTA.ACATTCCCGGCGGTGGaaattccccgtctgcatacgtgccGCAGGGAG...........ACATCGGTTCGAGTCCGATACAGGCCA tRNA-His-GTG-1-1 Sc: 33.2
Ile tRNAs
>>>>>>>..>>>>..........<<<<..>.>>>..........................................<<<<....................>>>>>.......<<<<<<<<<<<<. GGTCCGTTGGTGTAAT.GGTcA.ACATTACtTGGCTGATGtcttgtcgtattgcgatacggccggctg.......TCCAGCATAAAA..........GtTACCGGTTCGAATCCGGTACGGGCCA tRNA-Ile-GAT-1-1 Sc: 36.5 >>>>>>>..>>>>..........<<<<.>>.>>............................................<<<<...................>>>>>.......<<<<<<<<<<<<. GCTCGGGTGACGCAGT.GGTtA.GCGTGTT.GCTCTTATActtgtgtttcaggatacttgtt.............ATGCAAAG..............GtCGCGGGTTCAAGTCCCGCCTCGAGCA tRNA-Ile-TAT-1-1 Sc: 73.9 >>>>>>>..>>>>..........<<<<.>>.>>>..........................................<<<<<...................>>>>>.......<<<<<<<<<<<<. GGTCCGCTGGTGTAACTGGT.A.ACACGCC.TGGTCTATGgaatgaactttactcaggcaactagtctggggg..ATCAGGAA..............CcCGCCGGTTCGAATCCGGCGCGGACCA tRNA-Ile-TAT-2-1 Sc: 48.2 >>>>>>>..>>>>..........<<<<..>.>>>..........................................<<<<....................>>>>>.......<<<<<<<<<<<<. GGTCCGCTGGTGTAACTGGT.A.ATACGCC.TGGTCTATGgaaaatgctttactcgggacaactagttctgggggATCAGTAA..............AcCGCCGGTTCGAATCCGGCGCGGACCA tRNA-Ile-TAT-3-1 Sc: 36.8
Leu tRNAs
>>>>>>>..>>>..............<<<.>>>>>........................................................................................<<<<<..>>>.............<<<...>>>>>.......<<<<<........<<<<<<<. GGCAAGATGGCCGAGC.GGTctA..AGGCGCCAGGTTCAGGtctacttgaactcgctcatctgagct.....................................................T..CCTGGT.CTAGA.........AATAGG.CGTGGGTTCGAATCCCAC........TCTTGTCA tRNA-Leu-CAG-1-1 Sc: 63.9 >>>>>>>..>>>>............<<<<.>>>>>........................................................................................<<<<<........................>>>>>.......<<<<<........<<<<<<<. GCGCGGTTGGCGTAGT.GGTatA..ACGCGTACACTTCAGAacttgtgctgagggtgaggcacgacccgaggacgcaccacacacaatgtgtgaagcggctggcaaaccgt.........A..GTGTAAG...................AcCCCGGGTTCGAATCCCGG........ACCGCGCA tRNA-Leu-CAG-3-1 Sc: 63.4 >>>>>>>..>>>..............<<<.>>>>>........................................................................................<<<<<..>>>.............<<<...>>>>>.......<<<<<........<<<<<<<. GGCAAGGTGGCCGAGC.GGTctA..AGGCGCCAGGTTCAGGtccacctgaattcactcatcccgagtt....................................................T..CCTGGT.CTAGA.........AATAGG.CGCGAGTTCGAATCTCGC........CCTTGTCA tRNA-Leu-CAG-2-1 Sc: 61.4 >>>>>>>..>>>>............<<<<.>>>>>........................................................................................<<<<<........................>>>>>.......<<<<<........<<<<<<<. GCGCAGTTGGCGTAGT.GGTatA..ACGCGTGCACTTCAGAcacctgtgctgagggtttggcaccccgaggacgcatgttcgaactggggggcggcaaagactgcagtatatacaaatctG..GTGCGAG...................A.CCTGGGTTCGAATCTTGG........ACTGTGCA tRNA-Leu-CAG-4-1 Sc: 36.5 >>>>>>>..>>>..............<<<.>>>>>........................................................................................<<<<<..>.................<...>>>>>.......<<<<<........<<<<<<<. GGCAAGGTGGCCGAGT.GGTt.A..AGGCGTTGTGTTTAGGttatcaaatgattaacttgaaa.........................................................C..CGCAATGGGA.............AACCtCGCGAGTTCGAATCTCGT........CCTTGTCA tRNA-Leu-TAG-1-1 Sc: 54.9 GGCAAGGTGGCCGAGT.GGTt.A..AGGCGTTGTGTTTAGGttatcttctgattaacttgaaa.........................................................C..CGCAATGGGA.............AACCtCGCGAGTTCGAATCTCGT........CCTTGTCA tRNA-Leu-TAG-1-2 Sc: 54.9 >>>>>>>..>>>>............<<<<.>>>>>........................................................................................<<<<<........................>>>>>.......<<<<<........<<<<<<<. GGTCCGCTGGTGTAACTGGT..Ac.ACACGCCTGGTCTAGAgaatacgctactcgggcaactagtctggggg................................................A..TCAGGAA...................AcCGCCGGTTCGAATCCGGC........GCGGACCA tRNA-Leu-TAG-2-1 Sc: 45.4 >>>>>>>..>>>..............<<<.>>>>>........................................................................................<<<<<..>>>.............<<<...>>>>>.......<<<<<........<<<<<<<. GGCTGGATGGCCGAGC.GGTctA..AGGCGCTAGACTCAAGaactccaagttcttcttcaccataaaggtgaggtgca..........................................T..TCTAGT.ATCGC.........AAGATG.CGTGGGTTCGAATCCCAC........TCCAGTCA tRNA-Leu-CAA-1-1 Sc: 69.7 GGCTGGATGGCCGAGC.GGTctA..AGGCGCTAGACTCAAGaacaaagttctttctgcacaaagtgcggtgta...............................................T..TCTAGT.ATCGA.........AAGATG.CGTGGGTTCGAATCCCAC........TCCAGTCA tRNA-Leu-CAA-2-1 Sc: 69.3 GGCTGGATGGCCGAGC.GGTctA..AGGCGCTAGACTCAAGaaccaagttcttcttcaccataaggtgaggtgca.............................................T..TCTAGT.CTCGA.........AAGAGG.CGCGTGTTCGAATCACGC........TTCAGTCA tRNA-Leu-CAA-3-1 Sc: 63.9 >>.>>....>>>..............<<<.>>>>..........................................................................................<<<<..>>>>...........<<<<...>>>>>.......<<<<<..........<<.<<. GTCTG....GCCGAAC.GGTctA..AGGCGCTAGACTCAAGaaccaagttcttcttcaccataaggtgaggtgcattct.........................................A..CCTAGT.CTCGA.........ATGAGG.CGCGTGTTCGAATCACGC...ttcagTTCAAACT tRNA-Leu-CAA-4-1 Sc: 29.3 >>>>>>>..>>>..............<<<.>>>>>........................................................................................<<<<<..>>>>...........<<<<...>>>>>.......<<<<<........<<<<<<<. GCCGAAATGGCCGAGT.GGTctA..AGGCGCTTGACTTAAGtttgattttctccatcttaaggtc.......................................................T..TCAAGT.TCTC.GCGA......GAGAG.CGTGGGTTCGAACCCCAC........TTTCGGCA tRNA-Leu-TAA-1-1 Sc: 72.9 >>>.>>>..>>>>............<<<<.>>>>>........................................................................................<<<<<........................>>>>>.......<<<<<........<<<.<<<. GTTGGATTAGCTCAGTTGGT..A..GAGCATTGTACACTAA...............................................................................AagTACAAAG...................GtCAGGAGTTCGACTCTCCT........ATCGAATA tRNA-Leu-TAA-2-1 Sc: 41.3
Lys tRNAs
>>>>>>>..>>>>...............<<<<.>>>>>...................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGCGTGGCGCAATTGGTtA......GCGCGTCAGACTTTTAcgaacaagtgaaggt.............ATCTGAAT...........GtTGCGAGTTCGAGTCTCGCCGTGGGCG tRNA-Lys-TTT-1-1 Sc: 75.8 GCCCGCGTGGCGCAATTGGTtA......GCGCGTCAGACTTTTAagaagcctgtgaaaaggccttctaagccATCTGAAT...........GtTGCGAGTTCGAGTCTCGCCGTGGGCG tRNA-Lys-TTT-1-2 Sc: 75.3 >>>.>>>..>>>>...............<<<<.>..>>...................................<<..<................>>>>>.......<<<<<<<<.<<<. GGGAGGATAGCTCAGTTGGA.AagatctGAGCTT..GGTTTAGAaaaacctttggttttta...........TCTGAAAG...........GtCGTGGGTTCGAATCCTGCTCCCTTCA tRNA-Lys-TTT-2-1 Sc: 31.0
Met tRNAs
Phe tRNAs
..>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<..... ATTCGATAGGCGCAACGGCA.GCGCGCGAGGGTAAAGCCCTTGAG...........GGGCAGGTTCAACTCCTGCATCGATAAca tRNA-Phe-AAA-1-1 Sc: 28.6
Pro tRNAs
>>>>>>>..>>>............<<.<.>>>>>.................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCAATGGTCTAGTGGTA...TGA.TTCGCGCTTCGGGttaaaccctcatggtcaccatgaa..................TGTGCGAG...........GtCCCGGGTTCAAATCCCGGTTGAGGCC tRNA-Pro-CGG-2-1 Sc: 62.5 GCCTCAATGGTCTAGTGGTA...TGA.TTCGCGCTTCGGGtggcagtgcaactgctccttgcttgtacacaagcaataccaaTGTGCGAG...........GtCCTGGGTTCGAATCCCAGTTGAGGCC tRNA-Pro-CGG-3-1 Sc: 62.4 GGCTCAATGGTCTAGTGGTA...TGA.TTCGCGCTTCGGGttaaaccctcatggtcaccatgaa..................TGTGCGAG...........GtCCCGGGTTCAAATCCCGGTTGAGCCC tRNA-Pro-CGG-1-1 Sc: 61.4 GGCTCAATGGTCTAGTGGTA...TGA.TTCGCGCTTCGGGttaaaccctcatggtcaccatgaa..................TGTGCGAG...........GtCCCGGGTTCAAATCCCGGTTGAGCCC tRNA-Pro-CGG-1-2 Sc: 61.4 >>>>>>>..>>>............<<.<.>>>>>.................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTTAGTGGTCTAGTGGTA...TGA.TTCTCGCTTTGGG..........................................TGCGAGAG...........GtCCCGGGTTCAATCCCCGGCTGAGCCC tRNA-Pro-TGG-1-1 Sc: 71.7 >>>>>.>..>>>>..........<<<.<.>>>>>.................................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGCTCTGTGGTGTAGTGGTA...GCA.TACTTGCTTTGGG..........................................TGCAAGTG...........GtCCCAGGTTCGAACCCTGGCTGAGCCC tRNA-Pro-TGG-2-1 Sc: 71.2 >>>>>>>..>>>>..........<<<.<.>>>.....................................................<<<................>>>>>.......<<<<<<<<<<<<. GGTTCGTTGGTGTAATG..A...GCAaCATCC..CTGAGGtggaaaatccacttcggttacggccttt..............A..GGAAG...........A.TACCGGTTCGAGTCCGGTACGGACCA tRNA-Pro-TGG-3-1 Sc: 22.5
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.....................................................................................................................................................................................................................................................................................<<<<<......................>>>>>.......<<<<<.<<<<<<<. GCGCGGTTGGCGTAGTGGTt.A.ACGCGTTCGCT..CAGAAaactgctgtcccaatagacgtccaacttgggtctgcatagtcagtgcccgacatggccagggattactactctgac..........................................................................................................................................................................................A......GTGAGAG.................AaCCCGGGTTCGAATCCCGG.ACCGCGCA tRNA-Ser-AGA-1-1 Sc: 62.3 >>>>>>>..>>>............<<<.>>>>>.....................................................................................................................................................................................................................................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCGCGATGACCGAGTGGCctA.AGGTGTTTGAC..TCGAActaccattcgaggtct......................................................................................................................................................................................................................................................A......TCAAAT.CTCTTC.......GGAGG.CGCAGGTTCAAATCCTGC.TCGCGTCG tRNA-Ser-CGA-1-1 Sc: 66.2 GGCGCGATGACCGAGTGGCctA.AGGTGTTTGAC..TCGAActaccattcgaggtct......................................................................................................................................................................................................................................................A......TCAAAT.CTCTTC.......GGAGG.CGCAGGTTCAAATCCTGC.TCGCGTCG tRNA-Ser-CGA-1-2 Sc: 66.2 GGCGCGATGACCGAGTGGCctA.AGGTGTTTGAC..TCGAActaccattcgaggtct......................................................................................................................................................................................................................................................A......TCAAAT.CTCTTC.......GGAGG.CGCAGGTTCAAATCCTGC.TCGCGTCG tRNA-Ser-CGA-1-3 Sc: 66.2 GGCGCGATGACCGAGTGGCctA.AGGTGTTTGAC..TCGAActaccattcgaggtct......................................................................................................................................................................................................................................................A......TCAAAT.CTCTTC.......GGAGG.CGCAGGTTCAAATCCTGC.TCGCGTCG tRNA-Ser-CGA-1-4 Sc: 66.2 >>>>>>>..>>>>..........<<<<..>>>>.....................................................................................................................................................................................................................................................................................<<<<.......................>>>>>.......<<<<<.<<<<<<<. GCGCGGTTGGCGTAGTGGTttA.ACGCGCACACA..CCGAAacttgtgcgaagggtgtgagttcaatgccaacgcgagcacgcatgttcgttttctgggggggcccggcaagccatagtacaaataaggc.............................................................................................................................................................................A......GTGTAAG.................AaCCCGGGTTCGAATCCCGG.ACCGCGCA tRNA-Ser-CGA-2-1 Sc: 45.8 >>>>>>>..>>>>..........<<<<.>>>>>.....................................................................................................................................................................................................................................................................................<<<<<......................>>>>>.......<<<<<.<<<<<<<. GGGCCGTTGGTGTAGTGGTcaA.GCACGCAGCCT..TCGAAactcattgcctccactcatactcattgaaaaccatgaggaaccgaacagcaagtccgcatgctagagcgaagaagccatgtcaagatgagaccaaaacccaaaatagaggtagtgtccactgaatgacagaaggatcatatcccagacggatggtttgctggtggccaccgcagtatggatgaatccggagaaagactcgcatgtaggagagagacccagtaagactcttgggttgaggtgagggttggcgtgagggtcgttT......GGTTGAG.................GtTACCGGTTCGAATCCGGT.ACGGTTCA tRNA-Ser-CGA-3-1 Sc: 44.0 >.>>>>>..>>>>..........<<<<.>>.>.......................................................................................................................................................................................................................................................................................<.<<......................>>>>>.......<<<<<.<<<<<.<. GGCTCGTTGGTGTAATGGT..A.ACATTCCCGGC..GTGGAaattccgcgtctgcatacgtgc................................................................................................................................................................................................................................................C......GCAGGAA.................GaCAACGGTTCGAGTCCGTT.ACGGGACA tRNA-Ser-CGA-4-1 Sc: 30.7 >>>>>>>..>>>............<<<.>>...........................................................................................................................................................................................................................................................................................<<......................>.>>>.......<<<.<.<<<<<<<. GGTTGTATAGTGTAGCGGTt.A.TCACTCC...........................................................................................................................................................................................................................................................................................GGCA.................A.ACCCGGTTCGATTCCGTG.TACGACCT tRNA-Ser-CGA-7-1 Sc: 25.3 >>>.>....>>>>..........<<<<....>>.....................................................................................................................................................................................................................................................................................<<.........................>>.>>.......<<.<<...<.<<<. GCCCCG.TGGTGTAGTGGT..A.GCACA...CGC..TCAGGacgactcgcccagcctttgtacggctaaggtctgtagcttgagccaga......................................................................................................................................................................................................................A......TGGC.AG.................GcCCCAGGTTCGATTCCGGG.GAGTGGCA tRNA-Ser-CGA-5-1 Sc: 23.1 >>>.>.>..>>>>..........<<<<....>.......................................................................................................................................................................................................................................................................................<.........................>>.>>.......<<.<<.<.<.<<<. GCCCC.GTGGTGTAATGGT..A.GCACAC..GAC..GATTAagcgaagcctaagtctaggtaaggccggtgagagccgaaa..............................................................................................................................................................................................................................A......GC...AG.................GtCCCAGGTTCGACTCCGGG.CAGTGGCA tRNA-Ser-CGA-6-1 Sc: 21.2 >>>>>>>..>>>............<<<.>>>>>.....................................................................................................................................................................................................................................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GTCAACTTGGCCGAGTGGTt.A.AGGCGACAGAC..TTGAAtacccttattcagct.......................................................................................................................................................................................................................................................A......TCTGTT.GGGTTC.......GCCCG.CGTAGGTTCAAATCCTGC.AGTTGACG tRNA-Ser-TGA-1-1 Sc: 70.4 GACAACTTGGCCGAGTGGTt.A.AGGCGACAGAC..TTGAAtaacctcattattcagct....................................................................................................................................................................................................................................................A......TCTGTT.GGATTC.......GTCCG.CATAGGTTCGAACCCTAT.AGTTGTCG tRNA-Ser-TGA-2-1 Sc: 68.0 >>>>>>>..>>>............<<<.>.............................................................................................................................................................................................................................................................................................<......................>>>>>.......<<<<<.<<<<<<<. GGCGTGGTGGCGGAGTGGTctA.ACGCGCCAGAC..TTGAAatctgnnnnnnnnnnnnnnnnnnnnnn...........................................................................................................................................................................................................................................N......NNNNGA..................G.CGTCTGTTCGAATCAGGC.CCACGTCG tRNA-Ser-TGA-3-1 Sc: 46.0 >>>.>>>..>>>>..........<<<<.>>>>>.....................................................................................................................................................................................................................................................................................<<<<<......................>>>>>.......<<<<<.<<<.<<<. GCGCGGTTGGCGTAGTGGTatA.GCGCGTCACTCgaTTTGAggttcgggttgaaatccccgatgaatcacagtcaaagaccgagttttagagggcaacacgatcgagcaatccct............................................................................................................................................................................................T......GGTGAAA.................GaCCCGGGTTAGAATCCCGG.ACCTCGCA tRNA-Ser-TGA-4-1 Sc: 37.4 >>>>>>>..>>>............<<<.>>>>>.....................................................................................................................................................................................................................................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GTCACTTTGGCGGAGTGGTt.A.ACGCGCTGGCC..TGCTAttcgcaagaaagttt.......................................................................................................................................................................................................................................................A......GCCAGT.GCCTTC.......GGGCG.CCCAGGTTCGAATCCTGG.AGGTGACG tRNA-Ser-GCT-1-1 Sc: 72.2 GTCACTTTGGCGGAGTGGTt.A.ACGCGCTGGCC..TGCTAttcgcaagaaagtct.......................................................................................................................................................................................................................................................A......GCCAGT.TCCCTC.......GGGAG.CGTGTGTTCGAATCACAC.AGGTGACG tRNA-Ser-GCT-2-1 Sc: 67.3
Sup tRNAs
Thr tRNAs
>>>>.>>..>>>>.........<<<<.>>>>>...........................................................................................<<<<<................>>>>>.......<<<<<<<.<<<<. GCCCGTATAGCTCAGTGGT.A.GAGCGCTTCACTCGTActaaccatctgcgta.....................................................................ATGAAGAG...........GtCCGCGGTTCAATCCCGCGTGGGGGCA tRNA-Thr-CGT-1-1 Sc: 72.9 GCCCGTATAGCTCAGTGGT.A.GAGCGCATCACTCGTAttccaatttgcgat......................................................................ATGATGAG...........GtCCGCGGTTCAATCCCGCGTGGGGGCA tRNA-Thr-CGT-2-2 Sc: 70.8 GCCCGTATAGCTCAGTGGT.A.GAGCGCATCACTCGTAaacttccttcggaaagtgcaactacgat........................................................ATGATGAG...........GtCCGCGGTTCAATCCCGCGTGGGGGCA tRNA-Thr-CGT-2-1 Sc: 70.3 >>>>>>>..>>>>.........<<<<.>>>>>...........................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTGCTTAGCATAGTGGCtA.ATGCGTTGCACTTGTAtaactaccttgttctttcggggatttggtaacgacgac..............................................ATGCAAAG...........AtCACAGGTTCGATTCCTGTAGTAGGCA tRNA-Thr-TGT-1-2 Sc: 63.9 GCCTGCTTAGCATAGTGGCtA.ATGCGTTGCACTTGTAtaaccttgtccactgcgggtaaccaaagtgggtattgtctcgac........................................ATGCAAAG...........AtCACAGGTTCGATTCCTGTAGTAGGCA tRNA-Thr-TGT-1-1 Sc: 63.7 >>>>.>>..>>>>.........<<<<.>>>>.............................................................................................<<<<................>>>>>.......<<<<<<<.<<<<. GGTCACGTAGCGGAGTGGTtA.CCGCGATGCTCTTGTGagtcttgaccccgaagataccttctccaaagtgtttgtcccatactaacacacgcaattagatacctccaagccattggaagttATGCATAG...........GtCCTGGGTTCGACCCCCAGCGCGACCA tRNA-Thr-TGT-2-1 Sc: 56.7
Trp tRNAs
Tyr tRNAs
>>>>>>>..>>>>..........<<<<..>>>>>............................................................................................................................................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGCGGTTAGTGTAGTGGTttA.ACACGtCCACACAGTAAcccacggcccgggcccctctccagacatccccatgagactctgggttcgattgcatggtctggcgtttggcgttccttgcttttctcttggaaatcttgtgcgttgcattccggttccgttctcataaaaaaaataaaaacgaaaaaaaaattcataatcacccgagaagagggatggcttctggagactggcaccgcgccgtggacctgatcATGTGGAA...........AcCCTAGGTTCGAATCCTAGACTGCGCA tRNA-Tyr-GTA-1-1 Sc: 40.5
Val tRNAs
>>>>>>>..>>>...........<<<.>>>>>...........................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCGAATAGTGTAGTGGTtA.TCACGTTTGC...CTCACA................................................................................C.GCAAAAG...........GtCCCAGGTTCGAAACCTGGTTCGAGCA tRNA-Val-CAC-1-1 Sc: 81.7 GCTCGAATAGTGTAGTGGTtA.TCACGTTCGC...CTCACA................................................................................C.GCGAAAG...........GtCCCAGGTTCGAAACCTGGTTCGAGCA tRNA-Val-CAC-2-1 Sc: 81.3 GCTCGAATAGTGTAGTGGTtA.TCACGCCAGT...CTCACA................................................................................C.ACTGGAG...........GtCCCAGGTTCGAAACCTGGTTCGAGCA tRNA-Val-CAC-3-1 Sc: 79.0 AGTCGTATGGTCTAATGGTtA.TGATTTCTCG...TTCACAttagttgaatctgat.................................................................C.CGAGAAG...........GtTCTGGGTTCGATCCCCAGTACGACTA tRNA-Val-CAC-4-1 Sc: 59.5 >>>>>>>..>>>>.........<<<<.>>>>>...........................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGCAATTGGCGTAGTGGTtA.ACGCGTCCACcgcTTCACGttgaacatgcgggttgaaatccccgccgaaccactttcaaagaccgaatttgggggaaaatatgaccaatcaaagcttggTgGTGGAAT...........G.CCCAGGTTCGACTCCTGGATTGCGCA tRNA-Val-CAC-5-1 Sc: 41.7 >>>>>>>..>>>...........<<<.>>>>>...........................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTGCGTGGCCCAGTGGTtA.AGGCATCTGC...TTTACAtcgtaat.........................................................................C.GCAGAGG...........AtCGCAGGTTCGAGCCCTGCCGCGATCA tRNA-Val-TAC-1-1 Sc: 66.2 GGTTGCGTGGCCCAGTGGTtA.AGGCATCTGC...TTTACAtcgtaat.........................................................................C.GCAGAGG...........AtCGCAGGTTCGAGCCCTGCCGCGATCA tRNA-Val-TAC-1-2 Sc: 66.2