tRNA Gene Summary

Overview
High confidence set 359
tRNAs decoding standard 20 AA 358
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Unexpected anticodons 3
Non-canonical anticodon loop length 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 111
Secondary filter (low feature scores, possible rep. element) 69

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 29)
Arg TCT
5
Leu AAG
1
Leu CAA
5
Ile TAT
5
Tyr GTA
13
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
17
GGC
 
CGC
5
TGC
8
30
GlyACC
 
GCC
10
CCC
5
TCC
6
21
ProAGG
8
GGG
 
CGG
4
TGG
4
16
ThrAGT
11
GGT
 
CGT
4
TGT
4
19
ValAAC
9
GAC
 
CAC
9
TAC
6
24
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
 
CGA
4
TGA
3
ACT
 
GCT
7
 
 
 
 
23
ArgACG
7
GCG
 
CCG
3
TCG
7
 
 
 
 
CCT
5
TCT
6
28
LeuAAG
8
GAG
 
CAG
5
TAG
3
 
 
 
 
CAA
5
TAA
5
26
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
9
 
 
 
 
9
AsnATT
 
GTT
14
 
 
 
 
14
Lys 
 
 
 
CTT
14
TTT
15
29
AspATC
 
GTC
7
 
 
 
 
7
Glu 
 
 
 
CTC
6
TTC
8
14
HisATG
 
GTG
11
 
 
 
 
11
Gln 
 
 
 
CTG
10
TTG
6
16
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
10
GAT
1
CAT
 
TAT
5
16
iMet/Met 
 
 
 
CAT
7/6
 
 
13
TyrATA
 
GTA
13
 
 
 
 
13
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
21
 
 
 
 
21
Trp 
 
 
 
CCA
8
 
 
8
SelCys 
 
 
 
 
 
TCA
1
1