tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 150
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 3
Predicted pseudogenes 12
Total tRNAs 165
Intron Summary (tRNAs with introns: 7)
Ile TAT
2
Tyr GTA
5

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 97164

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
1
GGC
1
CGC
 
TGC
3
5
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
2
CCC
2
TCC
5
9
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
3
GGG
 
CGG
1
TGG
4
8
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
4
GGT
 
CGT
1
TGT
1
6
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
3
GAC
 
CAC
2
TAC
2
7
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
4
GGA
 
CGA
2
TGA
2
ACT
 
GCT
2
 
 
 
 
10
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
2
GCG
 
CCG
 
TCG
3
 
 
 
 
CCT
2
TCT
3
10
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
4
GAG
 
CAG
4
TAG
2
 
 
 
 
CAA
2
TAA
3
15
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
5
 
 
 
 
5
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
9
 
 
 
 
9
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
7
TTT
6
13
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
6
 
 
 
 
6
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
5
TTC
6
11
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
4
 
 
 
 
4
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
2
TTG
3
5
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
3
GAT
 
 
 
TAT
2
5
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
-/19
 
 
0
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
5
 
 
 
 
5
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
7
 
 
 
 
7
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
3
 
 
3
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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