tRNA Gene Summary

Overview
High scoring set 1003
tRNAs decoding standard 20 AA 1002
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 15
Unexpected anticodons 4
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 1864
Secondary filter (low feature scores, possible rep. element) 170

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 133)
Arg TCT
87
Leu CAA
3
Ile TAT
31
Tyr GTA
12
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
6
GGC
 
CGC
2
TGC
3
11
GlyACC
 
GCC
10
CCC
4
TCC
9
23
ProAGG
64
GGG
 
CGG
16
TGG
27
107
ThrAGT
120
GGT
 
CGT
26
TGT
7
153
ValAAC
9
GAC
 
CAC
19
TAC
2
30
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
17
GGA
 
CGA
21
TGA
10
ACT
 
GCT
4
 
 
 
 
52
ArgACG
7
GCG
 
CCG
7
TCG
27
 
 
 
 
CCT
11
TCT
92
144
LeuAAG
3
GAG
 
CAG
14
TAG
5
 
 
 
 
CAA
71
TAA
22
115
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
7
 
 
 
 
7
AsnATT
 
GTT
10
 
 
 
 
10
Lys 
 
 
 
CTT
11
TTT
4
15
AspATC
 
GTC
11
 
 
 
 
11
Glu 
 
 
 
CTC
20
TTC
7
27
HisATG
 
GTG
66
 
 
 
 
66
Gln 
 
 
 
CTG
47
TTG
11
58
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
25
GAT
 
CAT
 
TAT
31
56
iMet/Met 
 
 
 
CAT
5/9
 
 
14
TyrATA
 
GTA
12
 
 
 
 
12
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
82
 
 
 
 
82
Trp 
 
 
 
CCA
9
 
 
9
SelCys 
 
 
 
 
 
TCA
1
1