tRNA Gene Summary

Overview
High confidence set 538
tRNAs decoding standard 20 AA 538
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 26
Unexpected anticodons 10
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 12
Secondary filter (low feature scores, possible rep. element) 147

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 25)
Met CAT
12
Tyr GTA
13
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
20
GGC
 
CGC
11
TGC
10
41
GlyACC
 
GCC
21
CCC
9
TCC
10
40
ProAGG
14
GGG
 
CGG
8
TGG
7
29
ThrAGT
11
GGT
 
CGT
5
TGT
14
30
ValAAC
17
GAC
 
CAC
10
TAC
4
31
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
10
GGA
 
CGA
6
TGA
6
ACT
 
GCT
16
 
 
 
 
38
ArgACG
12
GCG
 
CCG
7
TCG
4
 
 
 
 
CCT
8
TCT
7
38
LeuAAG
16
GAG
 
CAG
8
TAG
6
 
 
 
 
CAA
8
TAA
4
42
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
14
 
 
 
 
14
AsnATT
 
GTT
27
 
 
 
 
27
Lys 
 
 
 
CTT
19
TTT
10
29
AspATC
 
GTC
24
 
 
 
 
24
Glu 
 
 
 
CTC
26
TTC
11
37
HisATG
 
GTG
10
 
 
 
 
10
Gln 
 
 
 
CTG
10
TTG
13
23
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
17
GAT
 
CAT
 
TAT
5
22
iMet/Met 
 
 
 
CAT
11/12
 
 
23
TyrATA
 
GTA
15
 
 
 
 
15
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
12
 
 
 
 
12
Trp 
 
 
 
CCA
13
 
 
13
SelCys 
 
 
 
 
 
TCA
 
0