tRNA Gene Summary

Overview
High confidence set 413
tRNAs decoding standard 20 AA 412
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 3
Unexpected anticodons 4
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 63
Secondary filter (low feature scores, possible rep. element) 64

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 30)
Arg TCT
5
Leu CAA
6
Ile TAT
5
Tyr GTA
14
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
20
GGC
 
CGC
5
TGC
9
34
GlyACC
 
GCC
18
CCC
7
TCC
8
33
ProAGG
8
GGG
 
CGG
4
TGG
6
18
ThrAGT
10
GGT
 
CGT
5
TGT
7
22
ValAAC
8
GAC
 
CAC
11
TAC
7
26
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
 
CGA
3
TGA
4
ACT
 
GCT
10
 
 
 
 
26
ArgACG
7
GCG
 
CCG
4
TCG
5
 
 
 
 
CCT
5
TCT
6
27
LeuAAG
8
GAG
 
CAG
9
TAG
3
 
 
 
 
CAA
6
TAA
4
30
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
13
 
 
 
 
13
AsnATT
 
GTT
18
 
 
 
 
18
Lys 
 
 
 
CTT
11
TTT
12
23
AspATC
 
GTC
13
 
 
 
 
13
Glu 
 
 
 
CTC
8
TTC
13
21
HisATG
 
GTG
10
 
 
 
 
10
Gln 
 
 
 
CTG
11
TTG
6
17
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
10
GAT
2
CAT
 
TAT
5
17
iMet/Met 
 
 
 
CAT
9/7
 
 
16
TyrATA
 
GTA
14
 
 
 
 
14
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
25
 
 
 
 
25
Trp 
 
 
 
CCA
9
 
 
9
SelCys 
 
 
 
 
 
TCA
1
1