tRNA Gene Summary

Overview
High confidence set 418
tRNAs decoding standard 20 AA 417
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 2
Unexpected anticodons 4
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 64
Secondary filter (low feature scores, possible rep. element) 67

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 30)
Arg TCT
5
Leu CAA
6
Ile TAT
5
Tyr GTA
14
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
20
GGC
 
CGC
5
TGC
9
34
GlyACC
 
GCC
18
CCC
7
TCC
8
33
ProAGG
8
GGG
 
CGG
4
TGG
6
18
ThrAGT
10
GGT
 
CGT
5
TGT
7
22
ValAAC
8
GAC
 
CAC
11
TAC
7
26
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
 
CGA
3
TGA
4
ACT
 
GCT
10
 
 
 
 
26
ArgACG
7
GCG
 
CCG
4
TCG
5
 
 
 
 
CCT
5
TCT
6
27
LeuAAG
9
GAG
 
CAG
10
TAG
3
 
 
 
 
CAA
6
TAA
4
32
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
13
 
 
 
 
13
AsnATT
 
GTT
18
 
 
 
 
18
Lys 
 
 
 
CTT
11
TTT
12
23
AspATC
 
GTC
13
 
 
 
 
13
Glu 
 
 
 
CTC
10
TTC
13
23
HisATG
 
GTG
10
 
 
 
 
10
Gln 
 
 
 
CTG
11
TTG
6
17
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
10
GAT
2
CAT
 
TAT
5
17
iMet/Met 
 
 
 
CAT
9/7
 
 
16
TyrATA
 
GTA
14
 
 
 
 
14
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
26
 
 
 
 
26
Trp 
 
 
 
CCA
9
 
 
9
SelCys 
 
 
 
 
 
TCA
1
1